LOC110524264 (LOC106573263)


Basic Information

Item Value
gene id LOC110524264
gene name LOC106573263
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 48291626 ~ 48304829 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603755.2
aaatTGGTGACCATACGGATAGAACATGCACTGCAGTGACCAATTTTGATGGATTGCAACAGGCATATATTTTGATACCAATAGACTACCAAACTGAGCTAGTGTTTGAGGAGTAAAACGTATCTGCCTGCAAGCGCTCGGGGCAAGCATCTCCATCTACTAGCGCGCAATAACTGAAATGGCACATTTTGCCTAAGGCGGTTTTTTGCAATGGCATAATGCATGACGATAGACGTAATTTGGCTTTAATGCCAGGGAGATGTTTAAATATAAAACTATTGGGGAGAAAGACGAGAACACTACCGAACTGAGAGGATCTGCGGGCGCCCTGAATATGCGACAGTTTTATTTAAGAGCCTATCATTTAATAGTTTTATGGACATTCACAGTATCCCTTTTATTAGACATTTTATCAAAACGttacatgtatgttttttttagGACGAACGTAGCCAATTTTCACACTCCTAAATCCGATGAGTGAGTTATGACAATTGGGAGCAAGATTAAACCGAACACTGCTACCCATGCAGCAGACCAGACTGCTCTCCGTTGGAATAAAACTGCGATGTTTTTTGGTCAAATCAAATTTACGTGTGAAATAAGAAACAGTGGATCTCATTTTCATCTTGAACTGAGATGTGGCGAGAGAAAAGGCTGCTCTATTATAACATAATCCTTGCCCTGCAGGCGTTTGAATAGCCCAGAGCAAGAATTCTTCTAGCCCGCTTCTTATTTAGGGACCGACTGGCTTTCTTCTCATAAAACTCGACGGTTTCATCATATCAGAAAAGGAAAGACCCGGATAAAGACAGATATACAGCAAACGACGACCAAACTGGCATAAAACAGCGATACAATTGGAAGGGAGAAGAGATTACTATGTCTTCTCTATCCGTGTCCTCCCAGGAGGGAAGAAGCATGTCCAGGATGTCTATGAGTCGTTCTCCAGTTTCTCCAATGAATGCCCAGGGCATCCCATCACCGGCCCAGCTGACTAAAGCCAACGCCCCGGTCCACATCGACGTGGGAGGACACATGTACACCAGCAGCCTGGGTACTCTCACCAAATACCCAGAGTCTAGAATCAGTCGTCTGTTTAATGGAACAGAGCCCATTGTACTGGACAGCTTGAAGCAGCACTACTTCATCGACAGGGATGGAGATATATTCAGATACATCCTCAGCTTCCTCAGGACTTGCAAACTACTGCTCCCAGAGGACTTCAAGGACTTCCCCCAGCTATACGAGGAGGCTCGCTACTACCAACTGACACCCATGGTCCGCGAGCTGGAGCGCTGGCAGACGGAGCAGGAGGGCCAGAAGAGACCGCCCTGCGAGTGCCTGGTGGTCCGAGTGACCCCTGACCTGGGGGAGAGGATTGCCCTCAGCGGAGGGAAGGTGCTCATCGAAGAGATCTTCCCCGAGACTGGAGAcgtcatgtgtaactctgtgaatGCCGGCTGGAACCACGACCCCACGCATGTAATCCGATTCCCTCTCAACGGCTACTGCAGGCTCAACTCAGTTCAGGTTCTGGAGAGGTTGTTCCAGAAGGGCTTCAGCGTGACGGCGTCATGTGGCGGCGGAGTTGACTCCTCCCAGTTCAGCGAGTACATCCTGTGTCGCGAGCTCCGCAGGGGTCAGCCCACCGGCACCACCATCCACATCAAACAAGAGCCTCTGGACTAGGTTGGGAGGAACAGAGGGACCCGTGAGAGATCAACACGTCCGGTGCTGATTTTCGAGTCCTATTTACACAACTTTAACAGTGGAAAAACACACAAGGACTCTTCATGCTTGGGAATATCATTTGCCAGCGGCAATGTAGACTGGACTAGCAAGATGTGAGAGGGTTGTGATTCTATGGAGACTCAAAGACACTAAAGGGATCCTCTGAGATGAGTCTGTCTGAGGTGAGCTCATTAGCTCTGTTTGTATGGAACTCTTACTGCTGCCATTTCCAACAGAGATACAGTATCTATCAGGATCCAAGTGAAATGGTCTGTCACTTCTGGGCTGTTGACAACTAGGAGGAAATAGCTCTAGTAATATGGTGCTCAATTCCAGCTTAGGTTTAACTGGGGACTCCTGTTCAAGCCTCAGGATGGGTCTACTGGTATGACCGATGACCTCCGCTTGAGAGACattatggctgcgtttacacaggcagcccaattctgatcttttgtcCAATGATTGGTAAACTGTATAAATGCAACCAAAAATGGCCATGCCCTACCGCAGGAAGGACAGAACATGTCTGTGTTTGCTTCATTTCTTGATGACTTCCTACCCAAGATCTGACTGTAACGTGTAGTTATTTGTTCAATTAAATGTCAAATGGACAATAT
>TU59011
TTTGAATAGCCCAGAGCAAGAATTCTTCTAGCCCGCTTCTTATTTAGGGACCGACTGGCTTTCTTCTCATAAAACTCGACGGTTTCATCATATCAGAAAAGGAAAGACCCGGATAAAGACAGATATACAGCAAACGACGACCAAACTGGCATAAAACAGCGATACAATTGGAAGGGAGAAGAGATTACTATGTCTTCTCTATCCGTGTCCTCCCAGGAGGGAAGAAGCATGTCCAGGATGTCTATGAGTCGTTCTCCAGTTTCTCCAATGAATGCCCAGGGCATCCCATCACCGGCCCAGCTGACTAAAGCCAACGCCCCGGTCCACATCGACGTGGGAGGACACATGTACACCAGCAGCCTGGGTACTCTCACCAAATACCCAGAGTCTAGAATCAGTCGTCTGTTTAATGGAACAGAGCCCATTGTACTGGACAGCTTGAAGCAGCACTACTTCATCGACAGGGATGGAGATATATTCAGATACATCCTCAGCTTCCTCAGGACTTGCAAACTACTGCTCCCAGAGGACTTCAAGGACTTCCCCCAGCTATACGAGGAGGCTCGCTACTACCAACTGACACCCATGGTCCGCGAGCTGGAGCGCTGGCAGACGGAGCAGGAGGGCCAGAAGAGACCGCCCTGCGAGTGCCTGGTGGTCCGAGTGACCCCTGACCTGGGGGAGAGGATTGCCCTCAGCGGAGGGAAGGTGCTCATCGAAGAGATCTTCCCCGAGACTGGAGAcgtcatgtgtaactctgtgaatGCCGGCTGGAACCACGACCCC

Function

NR:

description
BTB/POZ domain-containing protein kctd15-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603755.2 False 2354 mRNA 0.47 5 48291626 48304829
TU59011 True 786 TUCP 0.53 4 48294108 48304136

Neighbor

gene id symbol gene type direction distance location
LOC110524242 NA coding downstream 44578 48219440 ~ 48247048 (-)
LOC110524212 LOC106573258 coding downstream 168270 48071829 ~ 48123356 (-)
LOC110524205 LOC106573257 coding downstream 242430 48043492 ~ 48049196 (-)
LOC110524174 LOC106573254 coding downstream 503333 47785638 ~ 47788293 (-)
LOC110532355 faap24 coding downstream 558087 47725613 ~ 47733539 (-)
LOC110524273 LOC106573264 coding upstream 8836 48313665 ~ 48396381 (-)
LOC110524285 LOC106573130 coding upstream 135418 48440247 ~ 48463655 (-)
nup160 nup160 coding upstream 293349 48598178 ~ 48623416 (-)
LOC110532369 LOC100136364 coding upstream 402153 48706982 ~ 48748537 (-)
LOC110524343 LOC106573121 coding upstream 509976 48814805 ~ 48892487 (-)
G52774 NA non-coding downstream 104346 48182899 ~ 48187280 (-)
G52765 NA non-coding downstream 124086 48167288 ~ 48167540 (-)
G52743 NA non-coding downstream 131649 48141708 ~ 48159977 (-)
G52742 NA non-coding downstream 153046 48138263 ~ 48138580 (-)
G52738 NA non-coding downstream 156118 48135250 ~ 48135508 (-)
G52862 NA non-coding upstream 18510 48323339 ~ 48323599 (-)
G52863 NA non-coding upstream 20740 48325569 ~ 48325784 (-)
G52869 NA non-coding upstream 29886 48334715 ~ 48334927 (-)
G52877 NA non-coding upstream 43852 48348681 ~ 48349043 (-)
G52879 NA non-coding upstream 46741 48351570 ~ 48351885 (-)
LOC110524104 LOC106573248 other downstream 730417 47541224 ~ 47561223 (-)
G51649 LOC106573246 other downstream 913083 47377641 ~ 47378543 (-)
G51285 LOC106561952 other downstream 1001945 47288939 ~ 47289681 (-)
G51214 NA other downstream 1172593 47064774 ~ 47236625 (-)
G49962 NA other downstream 2341675 45948958 ~ 45949951 (-)
LOC110532382 LOC106573120 other upstream 679356 48971580 ~ 49044257 (-)
G55408 NA other upstream 2106805 50411634 ~ 50412128 (-)
G55627 NA other upstream 2460534 50765363 ~ 50767431 (-)
LOC110524514 borcs5 other upstream 2472918 50777716 ~ 50792069 (-)
G56372 NA other upstream 3095898 51400727 ~ 51412569 (-)

Expression


Co-expression Network