LOC110524313 (LOC106573128)


Basic Information

Item Value
gene id LOC110524313
gene name LOC106573128
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 48591020 ~ 48596608 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603847.2
caaatcatcGCGCATGCGCAGTGGGCTGCATATTCACCACATTGAAAATGTTTGCCTGAAACTCTCGGAAGTTTAGCCAAGAAGTTGCTGTGATTTACTTAGCTGCAATAAAGACGGTGCCACTAAAATAACCTAGCTTATTTTTTtgggggtatatatatatatatagaaagagagagacataaaggaTTATACATGGATTTATATCAATTTACATTATATTGTGGTCGAAAACATGAATGGTAGCCACCTTTGGAAGAAgttgtgatttatttatttttttggcgCTCTACTAGCTAACAACGCAGAGTAAAGATGGTGGAGTTGAGCTAGCTTCGTATGAGATagcagagctagctagctaggttgctATCGTTTGTGTCTGAAAAGTTTGGAAGAACTGCCCCCTTCCGTTTGCCATACTCGCCCACATCTTATGTTGGCAGAGCAGATAAAGAAAACATGAGTGCTCGGAAGATGGAACCAGGGATACTGGAGGTTGGAtctagACATCAGATGGTGCTCTGAAGAAGCCATGGGTAGCTGTTTAAGCTGTCCAGAGAAGGAGTCAATCCCAGATAATCATCAAACCAAATTTAAGGTGATAAACGTGGATGACGATGGGAACGAGCTGGGCTCGGGCATGATGGAGCTGACAGAGGTAGAGCTCGTCCTCCACACCTATCGCCGTGACGACGTCAAGTGGCCCTACATGTGCCTGCGTCGCTATGGCTACGACTCCAACCTCTTCTCCTTCGAGAGTGGCCGCCGCTGCCAGACGGGACAAGGGATCTTTGCCTTTAAGTGTGCTCGGGCGGAGGAGATCTTCAACATGCTGCAGGAGGTGATGCACAACCACAGCATCAGTGTGGTGGAGGAGGCCGTACTGGAGACCAACCAGCAGGCCACACATACTCCTGCCGCTCTGGGCTACTCTGTTCCCACCGTGCACAATGGTGTCACCCGGATCCCTTCGGTGGGCGACGCCCCCTCGCACCCCTCCACACGCCACCCATCTGTGGCCAGCACCCGACTGCCCTCGGTGGGAGAGGAGTCTACACACCCCCTCCTAGTGGCTGACGAGGCGGTCCACACTTATGTGAACACCACAGGCCTGCTGGATGACCAGCCCAGCCCTCTGACTGCTCCAGCCCCTCTGGACAGCCCTGGCTCAGCCCAGTCCCAGTGCCCCCCTACACCACCACCTCCGCGGGTAGCCAGACCAGAGccccaggcccagctccaggaaGAACCCCAGGTACTGCTGGAGTCCCAGGGGGTACGCTTCGTGCTGGGGCCCACCCCTGCGCAGAAAAAGATGGCCAAGGGGAAGCATCAGACTGAGGATGGAGAtgaagaggaggcaggggaggacTCAGAGTCCCCGGAgcctggagagggagagaccaacggccacacagacatggaggccCCAGCCCCACCAGAGGGCCAGCCTCAGCTGTCCTCTACACACTCCAATGGCTCCTCTGCCTCTGTCGGGGCTCCAGCCACAGCCCCTCGCCGCCATCTCTTGCCCCCCGTGACCCCCGACACCCTGCAGAATGTCAACAACTCAGCCCAGCGGCGCACGGCCCTCCTAGACTACGAGAACCTCCCAGCCCTGCCGCCCGTCTGGGAGACCCGCAAGCCCAGcaacgaggaggaggagaacaacaGTGGACCCCGTGGTGGAGGAGGCCAGGGGGGGCTAAAGATGTCCTCCCTCAACGGCTACAACCACCACAGCCTCCTCCACCACTCCTACTCCCATCCCCTGTCAGCCCACCCCCCTCTGTCAGCCATGGAGTCCTCCCACAACTATGTGAACACAGAGAATGTGACTGCCCCCCTCAGCGCCCGCTGTGCCCCCGACACGGCACGCCGCCGCAGCGACGGGCCCATCGTGTTCAACTTCGACTTCCGCCGGCCGTTGGGTCAGGAGCATCCCAAGACGCTCAACTACATCGAGGTGGAGATGGAAACTACCGCCTCTTCCTCCGCAGCCTCCAAGGGTGCGTCCTCAGACACCAGCAACCCCCACACGCCCCGCACCCCAACCTCGCCGCCTCTGCCTACCACCCCCACGCGCCGCACCGAGCTCTACGCCTTCATCGACATCGAGCGCACCGCCGCCATGTCCAACCTGCAGAAGGCCCGGCCGCATGACGACGGGTCACTGAGGAAAACGCGGCACAATAGCACAGAGCTTCCCACCAAAAGCACTGTCTGACTATTACCTGATCCGCCTGGCACCTTTTTCTACCATTTACCCCTTTTTTAAATATGAAACAAATGGGAAGGCAGCCTGTACAGGGGCCTTTgttagagacacagacagagaaacacgtGACGGAGACATTGGAAATGCAAAGAGACTCCAGAAAGCGGTCCTAAAATGAGATATAAACAGACTTGATTGGGGTTACCTGTAAGGGAATTCAGGTAGACCAAAGTAGGTACTTACTTGCCATATACCAATTTATTCCTATGGTAATATAATacctcttctccttcacccattctacagtgcatttgggTTGTTTATTATGTTAATAAGACTGGACTGCATTCCTCCTCACCCACCGTACAAATCAGTATTACTGAACAAAGCATTCCATTTAGCCTTTTTATGATTCACTACATGCTGCTGTAATTTCAGTATCTGAGGATTACATGGTACACTTCATGTTTGACTATGTACAGTAGATTCTGGCACAATAAATGTCTGTTCTGTTTGTA

Function

NR:

description
fibroblast growth factor receptor substrate 2-like

GO: NA

KEGG:

id description
K12461 FRS2; fibroblast growth factor receptor substrate 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603847.2 True 2739 mRNA 0.54 7 48591020 48596608

Neighbor

gene id symbol gene type direction distance location
LOC110524302 LOC106573126 coding upstream 106 48552081 ~ 48590914 (+)
LOC110524291 LOC106573129 coding upstream 81376 48483885 ~ 48510535 (+)
LOC110524253 LOC106573262 coding upstream 301459 48256867 ~ 48289561 (+)
LOC118964788 NA coding upstream 427279 48147399 ~ 48163741 (+)
LOC110524199 LOC106573256 coding upstream 577674 47983046 ~ 48013346 (+)
cttnbp2 cttnbp2 coding downstream 38887 48635495 ~ 48706569 (+)
LOC110532376 NA coding downstream 162431 48759039 ~ 48798504 (+)
LOC110524349 LOC106573123 coding downstream 208299 48804907 ~ 48815013 (+)
LOC110524405 LOC106573116 coding downstream 839154 49435762 ~ 49440232 (+)
kitlg scf coding downstream 1069924 49666532 ~ 49702958 (+)
G52431 NA non-coding upstream 16761 48573919 ~ 48574259 (+)
G52395 NA non-coding upstream 50132 48530447 ~ 48540888 (+)
G52300 NA non-coding upstream 236506 48354149 ~ 48354514 (+)
G52292 NA non-coding upstream 247670 48343098 ~ 48343350 (+)
G52390 NA non-coding downstream 1588 48598196 ~ 48598851 (+)
G52450 NA non-coding downstream 29990 48626598 ~ 48626797 (+)
G52546 st7 non-coding downstream 221140 48817748 ~ 48819992 (+)
G53252 NA non-coding downstream 469086 49065694 ~ 49079733 (+)
G53308 NA non-coding downstream 493512 49090120 ~ 49090352 (+)
G52324 NA other upstream 207763 48380542 ~ 48383257 (+)
G52080 NA other upstream 566062 48006674 ~ 48024958 (+)
LOC110520864 NA other upstream 1332122 47227246 ~ 47260224 (+)
LOC110524042 NA other upstream 1729556 46854230 ~ 46861465 (+)
G50010 LOC106573227 other upstream 2598129 45992273 ~ 45992891 (+)
G53181 NA other downstream 296889 48893497 ~ 48893912 (+)
LOC118964841 NA other downstream 1440966 50037523 ~ 50184257 (+)
LOC110524575 fgf3 other downstream 2853214 51449353 ~ 51451460 (+)
LOC118936380 LOC106581842 other downstream 5069607 53632830 ~ 53705421 (+)
G59031 NA other downstream 5391532 53988140 ~ 53988597 (+)

Expression


Co-expression Network