Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964840 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 49847620 ~ 49848979 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005052020.1 | True | 1136 | mRNA | 0.39 | 2 | 49847620 | 49848979 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524421 | NA | coding | upstream | 13617 | 49823910 ~ 49834003 (+) |
| kitlg | scf | coding | upstream | 144662 | 49666532 ~ 49702958 (+) |
| LOC110524405 | LOC106573116 | coding | upstream | 407388 | 49435762 ~ 49440232 (+) |
| LOC110524349 | LOC106573123 | coding | upstream | 1032607 | 48804907 ~ 48815013 (+) |
| LOC110532376 | NA | coding | upstream | 1049116 | 48759039 ~ 48798504 (+) |
| LOC118964841 | NA | coding | downstream | 188544 | 50037523 ~ 50184257 (+) |
| LOC110524434 | LOC106573111 | coding | downstream | 377377 | 50226356 ~ 50231065 (+) |
| LOC110524453 | LOC106573109 | coding | downstream | 606577 | 50455556 ~ 50509791 (+) |
| LOC110524456 | LOC106573106 | coding | downstream | 681669 | 50530648 ~ 50592851 (+) |
| LOC110524482 | LOC106573107 | coding | downstream | 751656 | 50600635 ~ 50675495 (+) |
| G54041 | NA | non-coding | upstream | 51412 | 49793247 ~ 49796208 (+) |
| G53899 | NA | non-coding | upstream | 261754 | 49554714 ~ 49585866 (+) |
| G53872 | NA | non-coding | upstream | 331540 | 49515610 ~ 49516080 (+) |
| G53817 | NA | non-coding | upstream | 422979 | 49424385 ~ 49424641 (+) |
| G53811 | NA | non-coding | upstream | 427831 | 49419588 ~ 49419789 (+) |
| G54472 | NA | non-coding | downstream | 73392 | 49922371 ~ 49922630 (+) |
| G54476 | NA | non-coding | downstream | 75191 | 49924170 ~ 49924397 (+) |
| G54481 | NA | non-coding | downstream | 77940 | 49926919 ~ 49927144 (+) |
| G54507 | NA | non-coding | downstream | 97628 | 49946607 ~ 49946846 (+) |
| G54532 | NA | non-coding | downstream | 117105 | 49966084 ~ 49966283 (+) |
| G53181 | NA | other | upstream | 953708 | 48893497 ~ 48893912 (+) |
| G52324 | NA | other | upstream | 1464363 | 48380542 ~ 48383257 (+) |
| G52080 | NA | other | upstream | 1822662 | 48006674 ~ 48024958 (+) |
| LOC110520864 | NA | other | upstream | 2588722 | 47227246 ~ 47260224 (+) |
| LOC110524042 | NA | other | upstream | 2986156 | 46854230 ~ 46861465 (+) |
| LOC110524575 | fgf3 | other | downstream | 1600843 | 51449353 ~ 51451460 (+) |
| LOC118936380 | LOC106581842 | other | downstream | 3817236 | 53632830 ~ 53705421 (+) |
| G59031 | NA | other | downstream | 4139161 | 53988140 ~ 53988597 (+) |
| LOC110525327 | LOC106573036 | other | downstream | 4195870 | 54044813 ~ 54089850 (+) |
