mapk8ip1a (LOC106573101)


Basic Information

Item Value
gene id mapk8ip1a
gene name LOC106573101
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 50871475 ~ 50888496 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604286.2
GGCAGGGACTTACAGGAGGAGAACCTACCCAGCTAGGGCTGATGGGCTGGAGCTTGAGCGAGTGATTGAGTCACCCGATCGCCAGTCTCTTTACTGTCCACCTGCAGCCTGCACCtccccccatcctcccatcctcctccggTCATTATTCTGGACCAGAGGGGGAGTacaaatacacagagaggagataagTGCCTGGGTGGAGCCCGTGGTGAAGAGAAGAGAGCTCTATACTGTGTGTGGGGGAAAGGACAAATAAGCTGTCTTTAGCTTCAGGGTCCCTCTCTAtcagtggtgtggtggtgttgttgttgtttttttgttgctgatGCTGTTGCTGACGTGTGGGCCAGAGCGGATGGAGATTGAAAAGTCAGGACTGTGAATGATGCTCTGTTGAAAGGCGGAAGTGCTGTAATTGCCTGTTGAATCGATCAGTTCCTGGTCCATCTGCCTACCCTGCCCAGCCCAGCTGATGTTGCTCTACCTCAGTCTGGCCATGGAGTCCAACGAGGATGGGGAGAattggagggaggaggagaatggaGAGAAGTGGATGGAGGACCAGTGGGAGAAATGGCTGACCCATGACATCAGCCTGGAGGAGTTTGAGGACGAGGACCTTTCTCAGGTCACAGAGATCACTGATGAGGCTGGAGCCAGCCTTAACTACGACGATCTTGACTCTCAAGACCATGTGACGTGGCCAGCCAGTAGCGAGGCGGGGAAGGCAGACGGGCGGGGGTTCAGGGAAGTGCAGGCGGAGATGCTCCACTTGGACCTGATCGATGCTGAGGGGGAGAtccaggaggaagaggagcactGGGGCCTGATCCATGGTTCCCTCGGCGACCACAGACTcaaccaggaagagagaggggccgTCGTTCTAACTCCTGTCAGACAGCAACAGCCCAATGTGATAGAATTCAAATCTGCTGAACATCCAGTCGCTATGGATACGTACAGGCCCAAGAGACCCACCACACTAGCGCTGTTTCCACAGGTGCAGCCTCAGCCTCCTCAGCCTCCCAGGACTCAGGACAAGGATACAATTAACAACAACTCATTTGGAAAGAAGGACACATGGAAGGAGAATCTGTCAAACTCaaactcctcctccccccacaTAACAGGCGATCTGACACCCACTAATGAGCAGGTCAACGATGAGTCTAAAGTCCAGCAGCACAACGATGGCTCTGTGGCCAAGCAACCCCAACACAGAGGTAGAGTACCAGAGAAGGCAGTCAAGGCATACAGCAAGGACTACTCCACGTTCATCTCACATGGACCGACAGAATCACGGGGCAGGCGGCGTGACGCAAAGCAGCGGGATAAGAAGTCCTCCACTGCTCCACACAACCGGACGACAGCAGCAAAGCCGAAAGCAGACAGCATGAGAGACAAAGCTGTAGATGGGGATAGGGATGGGAGCAGGGGGCGAGGAGGACAGGGGCATGGGCGGGGGTGCTGCAGTAAGGAGGAGCGCCAGCCAGAAGCCACAGAGGAGATCTACCTGACACCGGTACACcagaagaacacagacactgaccGTCCAGACTCTGACCGTCCCTTCCTGTCTCAGAGCAGCGAGGGCAATCGCATGTCAATCAGCTCTGACGCGGAGGGACCCCCAGCGTACACAAACACTGCCCTCCCCAACCGAACAAACCCCTCTATCAGCGAGGAGGACGAGGTCTACCTGCACCCCCCTGCACCTCCTCCACGTtccttctccatctcctcatGCTTTAGGCCATCTGACAGTGAGGGAGGGGAGCGGGAAAGGGGGTTGTGGGACAGGGGCTCTAAGTCTAGCTCTAAGGGTGAGTCGGGGGGGTTGGGGGCCCTGCGGACTGCACACGCTCAGAGCTCCGAGGCCGACGGCCTCTCCTATGACTCTGTTAAGTACACCCTAGTGGTGGACGAGCACGCCAAGTTAGAACTGGTGAGCTTGAAGCAGTGCTACCAGAGCTACAGTGATGAAAGCGACACAGAGACGGTATATGAGTCAGCCAACGAGGAAGAGGACTATGAGGTGGATCACAGCGAGCTGAAGAGAGAAAGGAAGTCATCACGTCTGTCGAGGGCTTCTTCGTCCTCTGAGGCAGGAGTTGGCGGGGGACCTCGAACACGCAAGTTCCGCAATGTGTTTGTGAACAAACATTTACACTCTTCTGGTGCGGAGTCCTTTGGCCTGTTCTCCTGTGTGTTGAATGGAGTAGAGCAAGAGCAGAGCCACAGAGCTGTGTTTAGGTTTGTCCCTCGCCATAGCGATGAGCTGGAGCTAGAAGTGGACGACCCTCTGCTGATGGTGGTTCAGGCTGATGATCTCTGGTGTAAGGCCTACAACATGAGAACTGGGGCCTGCGGCATCTTCCCTGCCTACTACGCTGCCAAGGTCACCCAGGAACCCATCAAAGATAACAAAGATGACTGGGTAGACAGGTTCCGAGTGAAGTTCCTGGGTTCCGTTAACGTACCCTACCACAAAGGCAACGATGTGCTTTGCGCTGCTATGCAAAAGGTTGCTAACAACCGCCGGATGACCCTGCAGCCTCCCTCTGCATGTATTCTGGAAATCAACCTGAAGGGGGTGAAAATCATTGTGCAAGATGAATGTAGGACCTCGGAAAGAGGGGATAAGTGCTTTCACTTTTTTCAGCTTAAGAACATCTCCTTTTGCGGCTGTCACCCAAAACATAACAAGTATTTTGGATTCATCACCAAACATCCTGATCACCAGAGGTTTGCTTGCCATGTGTTTATGTCAGACGACTCCATGATGCCTCTGGCTCAGTCTGTTGGGAAAGCCTTCCAATTGTACTACAAGGAAACGGTGGGCTACTCATGCCCAACGGAGGACATCTTCATTGAGTAGCTTTCTTCTCGCTATAGTACATTTCTCCAATGTTGTGTCATGATGAAACAACTTGCATTGGTGGATTACTGCATTGAATGGTAACTAACTTATAGTAATATTGATCTGTCACACAGGTCTACTTGGTGCGGTCTTCCTATTCACTGTCGTGTTTCCACAGCACAAACAGAAATACCCAAACTAAAGCATTACCAATCCTATCCAAAAGAGCATACTTAGATCttccttaaaaataaaaaaaatgtaattggccTAAAGTACAGTACTTTTAAATGTAAAGTGTGCAGCCAAATTTAAAGGACCGGCACTACAGTACAGAAAATACCAAAAGTAGTTACAGATTTCAGATCTAATTCAATATCACACTCAAAATCAAGATAGAATGTTTCTATGTGTGTGGTTTTACGAGCAACTCCAAATTATATGAGATCACTATATCAAGTCACCTGGAAACCTTGTCTTtgcacagaggaagacagagaggcagTGATTTCAATCTGTCTGTACGTGTTCCTGGACTGTTTTTAAAATCACACTGTGTTTGATTTCAGAATCAGTTAGTATGTATGTTGGATGGGAAAGTGTATTAATGGATTAATGGTCCCCATCACATCATAACAGGCTTTAAATGAAGTCCCGTTCATCATTCTCACCAATGAACTCTGACTAGGGCCTGTCATCTATCTTCCAATACCAAAAAGGTGAATTCACTTTTATTTCTCTCTTAATGTGACTCCGtacagccaatggcaatgtccgctttaggCTTGTGGATTTGACAACTCTTAACGCAGTTCCACCTCTGACACCTCCAAAACAACTGCTATGCGGATGTCGGCCAAAGCGGATATGATTTAATAGAGCCCATACTCCTACTGTAACTTGGAAACAATATTTTTGGCCCAAATTGTAAGGTGGGTTTCCTGTATAAGGAAAATACTTTAATAAATATGATCTTGGAATCACTGTGGTCTTTCCACTTTAAAAGTCACCCAGAAGGCATgtgttctaaaatcatgttttcaaACCACAAGTAGTGCCTATTTTCTAATTATTGTGGTTACTGTATACATGATGTGTTTCCTTTTTATTTGAGAAGGTTATCCTGGCACTGTGGGACAGATGTAATAGCTGTACAATATAAACATGCTGTTTGTAAATGAAATGTCCTACAGTTAGTTTGATCAAACCGGGTGTATATTGCATGATATCAATGTCAAACAAAACATtgtagagaaaaaaaacacaggaTGTCAATTCTTGTCATTAAATGTGAAGGTGTTTACATCCTC

Function

NR:

description
C-Jun-amino-terminal kinase-interacting protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604286.2 True 4176 mRNA 0.49 12 50871475 50888496

Neighbor

gene id symbol gene type direction distance location
LOC110532393 ckap5 coding downstream 20807 50808713 ~ 50850668 (-)
LOC110524514 borcs5 coding downstream 86436 50777716 ~ 50792069 (-)
LOC110524488 LOC106573155 coding downstream 119303 50718636 ~ 50752172 (-)
LOC110524445 LOC106573110 coding downstream 496944 50367566 ~ 50374531 (-)
LOC110524441 LOC106573156 coding downstream 601174 50260404 ~ 50270301 (-)
LOC110532401 NA coding upstream 9034 50897530 ~ 50991398 (-)
zgc:101566 LOC106573100 coding upstream 204029 51041431 ~ 51144745 (-)
LOC110524590 ccnd1 coding upstream 590550 51479046 ~ 51491719 (-)
LOC110524599 NA coding upstream 785057 51601527 ~ 51674973 (-)
LOC110524618 LOC106573092 coding upstream 962486 51850982 ~ 51886676 (-)
G55665 NA non-coding downstream 19063 50852206 ~ 50852412 (-)
G55628 NA non-coding downstream 57188 50767159 ~ 50814287 (-)
G55298 NA non-coding downstream 126021 50744255 ~ 50745454 (-)
G55611 NA non-coding downstream 138362 50730182 ~ 50733113 (-)
G55553 NA non-coding downstream 232333 50638913 ~ 50639142 (-)
G55753 NA non-coding upstream 1928 50890424 ~ 50891828 (-)
G55755 NA non-coding upstream 4821 50893317 ~ 50896831 (-)
G55840 NA non-coding upstream 105189 50993685 ~ 50993951 (-)
G56122 NA non-coding upstream 318063 51206559 ~ 51206794 (-)
G55627 NA other downstream 104044 50765363 ~ 50767431 (-)
G55408 NA other downstream 459347 50411634 ~ 50412128 (-)
LOC110532382 LOC106573120 other downstream 1885558 48971580 ~ 49044257 (-)
LOC110524264 LOC106573263 other downstream 2567339 48291626 ~ 48304829 (-)
G56372 NA other upstream 512231 51400727 ~ 51412569 (-)
G56764 NA other upstream 858121 51746617 ~ 51747220 (-)
G57742 NA other upstream 1607402 52495898 ~ 52496234 (-)
G58565 LOC106561659 other upstream 2250962 53139458 ~ 53140304 (-)
LOC110525078 LOC105021811 other upstream 2446228 53334724 ~ 53338484 (-)

Expression


Co-expression Network