Item | Value |
---|---|
gene id | LOC110524813 |
gene name | LOC106573076 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048565.1 |
NCBI id | CM023219.2 |
chromosome length | 95772356 |
location | 52707550 ~ 52722838 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
CCR4-NOT transcription complex subunit 4-like isoform X1 |
id | description |
---|---|
K10643 | CNOT4, NOT4, MOT2; CCR4-NOT transcription complex subunit 4 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021604743.2 | False | 2830 | mRNA | 0.56 | 13 | 52707550 | 52720446 |
XM_021604727.2 | False | 2946 | mRNA | 0.56 | 14 | 52707550 | 52720507 |
XM_021604734.2 | True | 5225 | mRNA | 0.49 | 13 | 52707550 | 52722838 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110524804 | NA | coding | upstream | 4903 | 52698680 ~ 52702647 (+) |
LOC110524698 | LOC106573080 | coding | upstream | 156341 | 52528778 ~ 52551209 (+) |
LOC110524688 | LOC106573082 | coding | upstream | 182832 | 52520506 ~ 52524718 (+) |
LOC110524629 | LOC106573088 | coding | upstream | 789566 | 51900323 ~ 51917984 (+) |
LOC110524623 | LOC106573089 | coding | upstream | 812633 | 51888400 ~ 51894917 (+) |
LOC110524844 | LOC106573071 | coding | downstream | 160032 | 52882870 ~ 52889860 (+) |
LOC110524847 | LOC106561671 | coding | downstream | 181806 | 52904644 ~ 52925473 (+) |
LOC110524881 | LOC106573069 | coding | downstream | 202797 | 52925635 ~ 52936875 (+) |
LOC110524905 | s35b4 | coding | downstream | 232965 | 52955803 ~ 52962832 (+) |
LOC118964862 | NA | coding | downstream | 256817 | 52965815 ~ 52988549 (+) |
G57802 | NA | non-coding | upstream | 76227 | 52624389 ~ 52631323 (+) |
G57758 | NA | non-coding | upstream | 115185 | 52565022 ~ 52592365 (+) |
G57769 | NA | non-coding | upstream | 152173 | 52553300 ~ 52555377 (+) |
G57740 | NA | non-coding | upstream | 212168 | 52495138 ~ 52495382 (+) |
G57811 | NA | non-coding | downstream | 21518 | 52744356 ~ 52748628 (+) |
G58134 | NA | non-coding | downstream | 139734 | 52862572 ~ 52862774 (+) |
G58205 | NA | non-coding | downstream | 220047 | 52942885 ~ 52943257 (+) |
G58229 | NA | non-coding | downstream | 273788 | 52996626 ~ 52996842 (+) |
LOC110524575 | fgf3 | other | upstream | 1256615 | 51449353 ~ 51451460 (+) |
LOC118964841 | NA | other | upstream | 2623554 | 50037523 ~ 50184257 (+) |
G53181 | NA | other | upstream | 3813638 | 48893497 ~ 48893912 (+) |
G52324 | NA | other | upstream | 4324293 | 48380542 ~ 48383257 (+) |
G52080 | NA | other | upstream | 4682592 | 48006674 ~ 48024958 (+) |
LOC118936380 | LOC106581842 | other | downstream | 943377 | 53632830 ~ 53705421 (+) |
G59031 | NA | other | downstream | 1265302 | 53988140 ~ 53988597 (+) |
LOC110525327 | LOC106573036 | other | downstream | 1322011 | 54044813 ~ 54089850 (+) |
G59963 | NA | other | downstream | 1998350 | 54721188 ~ 54721463 (+) |
G61202 | LOC106573044 | other | downstream | 3182670 | 55905508 ~ 55923376 (+) |