LOC110525010 (LOC106573059)


Basic Information

Item Value
gene id LOC110525010
gene name LOC106573059
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53187018 ~ 53233174 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036980054.1
AGCAGGCAGCGTGACTCACTAGAATAGCGGTTcagttcagacacacacacaccaaccgtAGTCATCTTTCGATCAAGTAGCATAGCCTAAACATAATCTGAAGAGGTAGAATTAATTGTTATAAACCAAAAAGAGACGGGATAACGAGGAAGCTCCCGTTCAATTACGTCAAAGATATTAGACTATTCTGATAACCTGCAGGTAGACTGCTACGCGTGATTGGTGGTAGGGCTACTGTAGGAGACCTTTTGCATTGGCGGCGCAGCGGGTTGTACGGATTGGCTGAGCGATGCAAGGTAGAATTGGGCGACACTCAGGAAGAAACTCTCTGTGATATCAGTCCGACTTCAGTCGGCACTAGACGGGGGGACCGTATTTCCTCACTGAGTCAGCACAAGGAGGTGAAAAACGGTGTCTCTAATCTAATCACTTCGGTCTTCCCTGGCGGCGACATGGCGAGGGAGAACGGAGAGTCGGGCGGGGATGGATCTTGGAAGAAGAATGTCGACGATATCAAGCATGTATTCGAGTTCAAAGAAGTCCTTGGAACGATAAAACATGAGAACATTGTGGCTTTGGAGGACATCTATGAGAGCTCCAACCACCTATACCTCATCATGCAGTTggtGTCTGGTGGTGAGTTGTTTGACCGCATCGTAGAGAAGGGTTTCTACACAGAGATGGACGCCAGCAGACTCATTAAACAGGTGCTTGACGCTGTCAACTACCTCCACGACATGGGCATCGTACACAGAGACCTCAAGCCAGAGAACCTGCTTTACTACAACCCCCATGACGAGGCCAAGATCATGATCAGTGACTTTGGTCTGTCTAAgatggaggggacaggagacgtGATGGCCACTGCCTGTGGGACGCCAGGATATGTGGCCCCAGAGGTTCTGGCTCAGAAGCCCTACAGCAAGGCAGTGGACTGCTGGTCTATCGGAGTCATCGCCTACATTCTGTTGTGTGGTTACCCTCCATTCTATGACGAGAATGACTCTAAGTTGTTTGAGCAGATACTCAAGGCAGACTATGAGTTTGATGCACCCTATTGGGATGATATATCGGATTCAGCCAAAGAGTTCATCAGCTCTCTGATGGAGAAGGATCCACAGAAGAGATTCACCTGTGACCAGGCTCTAGCCCACCCCTGGATTGCTGGGGACACGGCTCTCTGCAAGAACATCCATGAATCAGTCAGTCGGCAGATGAGGAAAAATTTTGCCAAAAGCAAATGGAGGCAAGCGTTTAACGCCACGGCAGTGATTCGTCATATGAGGCGCTTGCAGCTGGGCAGTAGTCTGAACAGCAGCTTTGGCAGCAGTATGAGCTTTGACCAACAGGGACCGAACTCTATGCTGGCCAAGAGCATGTCTGTAGACTGTGCCACCCTCTCACGCAAAGATGGTCCTCCAAAACCTCTGcccactctgcctctctccactGCAGCCTGCAGTGCCCCTGCCAGCATCAGAGGGGAACCACAGGCAGAACCACAGGTTGTGGCTACAGCTGCAGTGGTGGAGCCACCCCGGCCACGCCCCTCCACAGTCACCACCATCCACATGGGGACTAAATGACGTCAGGTTCCGCGGGAGGTCAGTTGGGAGACCACAGAGCTTTGAGTTGGTTTTCTTAATTCAACCCCTCAGAATTCCAGAATTTCTCTCCTAGTCTGCCCATCCCGCCCATTATCAGCTGTTGGGATTGAGAACTTGAGGACCATGGCTCAGCACTTACTGCGTTCTCAGGGCAGCACTCTGTCTGTACCCAACCACAGTAAGTGTATTCAGAGATGTGAAATAAAATGAAGAGAGCTCACAGGATTTCCTATTTCCTAtcaaacagacaatcatatctGTTCTACATGATACATGCCTATTTGAACATTCTACTTCCTAACAGACCACAGGTCTGGTGGTGAAGAGATGAGGAagaccactgtctctctctctctctctctctctctctctctgtctactgaCCAGAGGGTTTAGTTTCCCAGTGTTTAAATTGGGTTGGTGGACTCGGTACGGAGTAATTGCAACACAAAATGTTCACCTCTTATAGAATGTTCACTCTAAAATATGAACACGGACATTGAAAATATTGTACTGTAAAATGAAAATGGCTCCTGAAATGAATACCGGCATCTTTGTCATTCCACTTCGAGCACTGCCGTGTTGTACGACTGTCCTCCAGAAGACAAGAAGACCTGTTTTGTATGGGACATTGGTGGTGTTATGAGGCCACACTATGCTAGGTTGAAGATGGAGAAGGTTAAGACAACGTAATAATTCCGTGCAAGATGCGTTCGAATATAAACAAATTCATTGGACCAGCGCTGGAGCGAAAATGACTGGAAGTGAATGTTAGCAGTACAGAAAGTTTGCCATCAAAGTGGAAAATAAACACAATCGTAGAGAATATCTGTTAACTACTCAGCCAACAAATAACTTAACTGTTTTACTGTCATTCTATtcgtttaaatgttttttttcttccaaatgAGCTACAGACACTTTACTACTTGATTTCCCAACTGCTGGTCACGTTTTCAATGCTTATCTCCTGTAAAATCAGAAACAGCGCTGGTCCAATGAATGTGTTTCTTTTCAAATGCTGCCGCATGGAATTATTCCGTTTTCTTCTCCTTATGGGAACTCACCATGTTTTTATTAGTCTTTGTTATTGAGACTGCTGTAATTCTGAGACTGTGAGTGTCAGGGGCATCACGCCCTCTATGCCTTGTGTTCAAAATTGCACCCTGAAACCATTGTGAGGAGTTACTTTTATGAAACTGAAACAGCATTCAAGACTAAAATAGTGATGACTTCTTATCCTAATTTCTAGTTTTCATTTTTAGCTGCAGTTAAGGTTGAGTAAAATCACTGGTTCATTATTCCCAACTGTAGGGCATAgcggttatatatatatatttgctttATGTTTTCTGGATATATAATGTCAGAGAAACACATCTATCTGCAGAATCATGCACACACCTGTGAATGAAGTGCTTTACTAGTGTGAGACAACTGGCAAGAGCAGTTTTGACGGCCGGTTGTGACGGTAATGACGGCCGGTTGTGACGGTAATGACGGTAATGACGGTAATGACGGTAATGACGGTTGTGACAGTTATGCATTCATCGTACACTTTTCCTGATTGAAAGgtattgaattatttattttcttattCTGACTCTTGTAAGAACTTTACTTACAGGGGAAAAAAATTGTAAATGTGTCACAATATGTCAGATATGTTGTCAGTAGTAGGTTCAAATGTATAGTTGTTACTTGTGAATAATTGCGATGTAACTGTGACGCCATCCTTAGCATAAGGATAGCATAGCTTTGTGACCTGTTCTCAGGGAGATACTTTGACAATTTGATGAAATGAAATCCCAGTTCTGATGCTGAGGTTGACGTTTATGATGATGATGCATGATATTAACTAAAGCAAGCTTTGCATATTCTTACGTGTCCCGTCAGGACAGTTCAGctcataattttaaaaaaaaattggtggGGATGAACCTTACGTGGAATGGACAGTTTGATATATCCCATTTTGGGGGCATTGTTTAAAAATCAAACAAATGGGATGAGACTGAAATGATGCGTATTATAACAATGACCACTGCAATAGAGTTCAATTTAAACACATATGACAAACTAAGAAATAAAGATTGAAGTCATTTGATAGTCAGTGCGCCATTGCAGAATAATTTTGTAGTAGCTTGTGTAGTATAGCCAACTTTAGTTACCTTTTGCTGCTTTGCTTCTTCCCCCCCAGGCGCTGGCTGTTCCCAGAAGTGCTCACACACTGTTTGGTCAGTGTACTTTCATACCCGTCCTTTGAATTTAGCAGCCAgttgctgtctctctcactgtcctcaCTCTCTGTCTTCGCTCCTCTCTCCCAAAACGAACGGTCTTCACGCTGCAAGGAGGAGGGACATCTGTCTAGCAAGCGTTTTTACCTGTGATATACCACTGCTTAATATTTCACTGTTCGACATGGATGGAACCAGGGTtgatttcatttcattcagtttactttctgaattgactttATTTCAAATGGTATTGACCCCCAACCCTGGATGCAACTTAAAAGCTTGAAATTAGTATGTTTCGATGTTGAGCACAATTGTAGATCTCAATGTGCAATGTTGATGTAAAAGGACTTGAAAAACTACTTCTCAGGGGCAGTAAACTATGAGTATAGATATATGTTCATGAAGATGTAGATCCTCTTGTCCTTTTGTAGATATACATCTCAGTAACCATATTTGCTTGGATTGCGGTGTTTATTGATTTTCTACGTTACAAATACTGTATGTTCTCTTCAAAAACAGCATGATACAAAGCATGAAATATAAAGCTTTTACAAAGCATGCATGAAAAGCACTTTGTTTGAGAGATACTGTGTATATAGGTTGTGATAAAGTGGACTACAAGATGACTAAGTCTTGAATACAATCAAATAAAAAGTAAGAACATACTTAACT
>XM_021604975.2
GCAGCGTGACTCACTAGAATAGCGGTTcagttcagacacacacacaccaaccgtAGTCATCTTTCGATCAAGTAGCATAGCCTAAACATAATCTGAAGAGGTAGAATTAATTGTTATAAACCAAAAAGAGACGGGATAACGAGGAAGCTCCCGTTCAATTACGTCAAAGATATTAGACTATTCTGATAACCTGCAGGTAGACTGCTACGCGTGATTGGTGGTAGGGCTACTGTAGGAGACCTTTTGCATTGGCGGCGCAGCGGGTTGTACGGATTGGCTGAGCGATGCAAGGTAGAATTGGGCGACACTCAGGAAGAAACTCTCTGTGATATCAGTCCGACTTCAGTCGGCACTAGACGGGGGGACCGTATTTCCTCACTGAGTCAGCACAAGGAGGTGAAAAACGGTGTCTCTAATCTAATCACTTCGGTCTTCCCTGGCGGCGACATGGCGAGGGAGAACGGAGAGTCGGGCGGGGATGGATCTTGGAAGAAGAATGTCGACGATATCAAGCATGTATTCGAGTTCAAAGAAGTCCTTGGAACTGGTGCGTTCTCTGAGGTGATCATGGCCAGGGAGAAGGCCACAGGGAAGATGGTTGCAGTGAAGTGCATCCCTAAGAAAGCACTGAAGGGAAAAGAGACCAGCATTGAGAATGAAATCGCCGTGCTTAGGAAGATAAAACATGAGAACATTGTGGCTTTGGAGGACATCTATGAGAGCTCCAACCACCTATACCTCATCATGCAGTTggtGTCTGGTGGTGAGTTGTTTGACCGCATCGTAGAGAAGGGTTTCTACACAGAGATGGACGCCAGCAGACTCATTAAACAGGTGCTTGACGCTGTCAACTACCTCCACGACATGGGCATCGTACACAGAGACCTCAAGCCAGAGAACCTGCTTTACTACAACCCCCATGACGAGGCCAAGATCATGATCAGTGACTTTGGTCTGTCTAAgatggaggggacaggagacgtGATGGCCACTGCCTGTGGGACGCCAGGATATGTGGCCCCAGAGGTTCTGGCTCAGAAGCCCTACAGCAAGGCAGTGGACTGCTGGTCTATCGGAGTCATCGCCTACATTCTGTTGTGTGGTTACCCTCCATTCTATGACGAGAATGACTCTAAGTTGTTTGAGCAGATACTCAAGGCAGACTATGAGTTTGATGCACCCTATTGGGATGATATATCGGATTCAGCCAAAGAGTTCATCAGCTCTCTGATGGAGAAGGATCCACAGAAGAGATTCACCTGTGACCAGGCTCTAGCCCACCCCTGGATTGCTGGGGACACGGCTCTCTGCAAGAACATCCATGAATCAGTCAGTCGGCAGATGAGGAAAAATTTTGCCAAAAGCAAATGGAGGCAAGCGTTTAACGCCACGGCAGTGATTCGTCATATGAGGCGCTTGCAGCTGGGCAGTAGTCTGAACAGCAGCTTTGGCAGCAGTATGAGCTTTGACCAACAGGGACCGAACTCTATGCTGGCCAAGAGCATGTCTGTAGACTGTGCCACCCTCTCACGCAAAGATGGTCCTCCAAAACCTCTGcccactctgcctctctccactGCAGCCTGCAGTGCCCCTGCCAGCATCAGAGGGGAACCACAGGCAGAACCACAGGTTGTGGCTACAGCTGCAGTGGTGGAGCCACCCCGGCCACGCCCCTCCACAGTCACCACCATCCACATGGGGACTAAATGACGTCAGGTTCCGCGGGAGGTCAGTTGGGAGACCACAGAGCTTTGAGTTGGTTTTCTTAATTCAACCCCTCAGAATTCCAGAATTTCTCTCCTAGTCTGCCCATCCCGCCCATTATCAGCTGTTGGGATTGAGAACTTGAGGACCATGGCTCAGCACTTACTGCGTTCTCAGGGCAGCACTCTGTCTGTACCCAACCACAGTAAGTGTATTCAGAGATGTGAAATAAAATGAAGAGAGCTCACAGGATTTCCTATTTCCTAtcaaacagacaatcatatctGTTCTACATGATACATGCCTATTTGAACATTCTACTTCCTAACAGACCACAGGTCTGGTGGTGAAGAGATGAGGAagaccactgtctctctctctctctctctctctctctctctgtctactgaCCAGAGGGTTTAGTTTCCCAGTGTTTAAATTGGGTTGGTGGACTCGGTACGGAGTAATTGCAACACAAAATGTTCACCTCTTATAGAATGTTCACTCTAAAATATGAACACGGACATTGAAAATATTGTACTGTAAAATGAAAATGGCTCCTGAAATGAATACCGGCATCTTTGTCATTCCACTTCGAGCACTGCCGTGTTGTACGACTGTCCTCCAGAAGACAAGAAGACCTGTTTTGTATGGGACATTGGTGGTGTTATGAGGCCACACTATGCTAGGTTGAAGATGGAGAAGGTTAAGACAACGTAATAATTCCGTGCAAGATGCGTTCGAATATAAACAAATTCATTGGACCAGCGCTGGAGCGAAAATGACTGGAAGTGAATGTTAGCAGTACAGAAAGTTTGCCATCAAAGTGGAAAATAAACACAATCGTAGAGAATATCTGTTAACTACTCAGCCAACAAATAACTTAACTGTTTTACTGTCATTCTATtcgtttaaatgttttttttcttccaaatgAGCTACAGACACTTTACTACTTGATTTCCCAACTGCTGGTCACGTTTTCAATGCTTATCTCCTGTAAAATCAGAAACAGCGCTGGTCCAATGAATGTGTTTCTTTTCAAATGCTGCCGCATGGAATTATTCCGTTTTCTTCTCCTTATGGGAACTCACCATGTTTTTATTAGTCTTTGTTATTGAGACTGCTGTAATTCTGAGACTGTGAGTGTCAGGGGCATCACGCCCTCTATGCCTTGTGTTCAAAATTGCACCCTGAAACCATTGTGAGGAGTTACTTTTATGAAACTGAAACAGCATTCAAGACTAAAATAGTGATGACTTCTTATCCTAATTTCTAGTTTTCATTTTTAGCTGCAGTTAAGGTTGAGTAAAATCACTGGTTCATTATTCCCAACTGTAGGGCATAgcggttatatatatatatttgctttATGTTTTCTGGATATATAATGTCAGAGAAACACATCTATCTGCAGAATCATGCACACACCTGTGAATGAAGTGCTTTACTAGTGTGAGACAACTGGCAAGAGCAGTTTTGACGGCCGGTTGTGACGGTAATGACGGCCGGTTGTGACGGTAATGACGGTAATGACGGTAATGACGGTAATGACGGTTGTGACAGTTATGCATTCATCGTACACTTTTCCTGATTGAAAGgtattgaattatttattttcttattCTGACTCTTGTAAGAACTTTACTTACAGGGGAAAAAAATTGTAAATGTGTCACAATATGTCAGATATGTTGTCAGTAGTAGGTTCAAATGTATAGTTGTTACTTGTGAATAATTGCGATGTAACTGTGACGCCATCCTTAGCATAAGGATAGCATAGCTTTGTGACCTGTTCTCAGGGAGATACTTTGACAATTTGATGAAATGAAATCCCAGTTCTGATGCTGAGGTTGACGTTTATGATGATGATGCATGATATTAACTAAAGCAAGCTTTGCATATTCTTACGTGTCCCGTCAGGACAGTTCAGctcataattttaaaaaaaaattggtggGGATGAACCTTACGTGGAATGGACAGTTTGATATATCCCATTTTGGGGGCATTGTTTAAAAATCAAACAAATGGGATGAGACTGAAATGATGCGTATTATAACAATGACCACTGCAATAGAGTTCAATTTAAACACATATGACAAACTAAGAAATAAAGATTGAAGTCATTTGATAGTCAGTGCGCCATTGCAGAATAATTTTGTAGTAGCTTGTGTAGTATAGCCAACTTTAGTTACCTTTTGCTGCTTTGCTTCTTCCCCCCCAGGCGCTGGCTGTTCCCAGAAGTGCTCACACACTGTTTGGTCAGTGTACTTTCATACCCGTCCTTTGAATTTAGCAGCCAgttgctgtctctctcactgtcctcaCTCTCTGTCTTCGCTCCTCTCTCCCAAAACGAACGGTCTTCACGCTGCAAGGAGGAGGGACATCTGTCTAGCAAGCGTTTTTACCTGTGATATACCACTGCTTAATATTTCACTGTTCGACATGGATGGAACCAGGGTtgatttcatttcattcagtttactttctgaattgactttATTTCAAATGGTATTGACCCCCAACCCTGGATGCAACTTAAAAGCTTGAAATTAGTATGTTTCGATGTTGAGCACAATTGTAGATCTCAATGTGCAATGTTGATGTAAAAGGACTTGAAAAACTACTTCTCAGGGGCAGTAAACTATGAGTATAGATATATGTTCATGAAGATGTAGATCCTCTTGTCCTTTTGTAGATATACATCTCAGTAACCATATTTGCTTGGATTGCGGTGTTTATTGATTTTCTACGTTACAAATACTGTATGTTCTCTTCAAAAACAGCATGATACAAAGCATGAAATATAAAGCTTTTACAAAGCATGCATGAAAAGCACTTTGTTTGAGAGATACTGTGTATATAGGTTGTGATAAAGTGGACTACAAGATGACTAAGTCTTGAATACAATCAAATAAAAAGTAAGAACATACTTAACT

Function

NR:

description
calcium/calmodulin-dependent protein kinase type 1D-like isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08794 CAMK1; calcium/calmodulin-dependent protein kinase I

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036980054.1 False 4525 mRNA 0.43 10 53187018 53233174
XM_021604975.2 True 4652 mRNA 0.44 11 53187023 53233174

Neighbor

gene id symbol gene type direction distance location
LOC110524999 LOC106573060 coding upstream 5258 53159233 ~ 53181760 (+)
LOC110524948 LOC106573061 coding upstream 37329 53080973 ~ 53149689 (+)
LOC110524927 LOC106573064 coding upstream 114270 53059953 ~ 53072748 (+)
LOC110524916 LOC106573063 coding upstream 139333 53007984 ~ 53047685 (+)
LOC118964862 NA coding upstream 201769 52965815 ~ 52988549 (+)
LOC110525022 LOC106573057 coding downstream 17435 53250609 ~ 53296485 (+)
LOC110532423 LOC106561694 coding downstream 122577 53355751 ~ 53373462 (+)
LOC110525096 LOC106573053 coding downstream 165876 53399050 ~ 53422754 (+)
LOC110525151 LOC106561689 coding downstream 204360 53437534 ~ 53485553 (+)
LOC110525170 LOC106573051 coding downstream 258672 53491846 ~ 53557609 (+)
G58192 NA non-coding upstream 155065 53031123 ~ 53031953 (+)
G58230 NA non-coding upstream 189588 52997224 ~ 52997430 (+)
G58229 NA non-coding upstream 190176 52996626 ~ 52996842 (+)
G58205 NA non-coding upstream 243761 52942885 ~ 52943257 (+)
G58187 NA non-coding downstream 361 53233535 ~ 53314985 (+)
G58181 NA non-coding downstream 101567 53334741 ~ 53337311 (+)
G58369 NA non-coding downstream 192366 53425540 ~ 53425822 (+)
G58371 NA non-coding downstream 193453 53426627 ~ 53426922 (+)
G58372 NA non-coding downstream 193790 53426964 ~ 53427210 (+)
LOC110524575 fgf3 other upstream 1736083 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 3103022 50037523 ~ 50184257 (+)
G53181 NA other upstream 4293106 48893497 ~ 48893912 (+)
G52324 NA other upstream 4803761 48380542 ~ 48383257 (+)
G52080 NA other upstream 5162060 48006674 ~ 48024958 (+)
LOC118936380 LOC106581842 other downstream 433041 53632830 ~ 53705421 (+)
G59031 NA other downstream 754966 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 811675 54044813 ~ 54089850 (+)
G59963 NA other downstream 1488014 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 2672334 55905508 ~ 55923376 (+)

Expression


Co-expression Network