ucmab (LOC106573148)


Basic Information

Item Value
gene id ucmab
gene name LOC106573148
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53238335 ~ 53250903 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989682.1
ATGGCTATCGAGGACTCGAACGAACTCACCACCCTCTGCATACCAACACAACGGCTCTCAACTCAGTCTTTCCTTTATCTTTTCTTCTCAGGTCCACTGAGGGAGATCTTCATGCCCGAGGCCGACGCAGCAAACTTCTTCAGACGCCGCAGCAGAAGAGCTGCCAAGTCTCAGGACGAAATTGACGCTGAACAGAGGCAGGTGCTGGCTGCAGATAAGCGGAAGAGAGAGAACCATGAGGAACAGAGGAATGAGTTTGAGAACTACGCTGAGGAGGAGCATGACGAGCAAGACGAGAGGACACGGGAGAGCACCGAGCAGTGGCGAGAGTTCCACTATGACGGCCTGCATCCCCCCCAGGAGTACAACCGCCAGTCTACCTGAGACATCACCGCCCTACTGGAGAACAGTGGTATTACAGCAGGCAGGACACAGAGGGCTACGCCCCCTACTATAATAGTAAATGTAACATTTTATAATGTCGTGTACGCTTCCATAAATACTTTGGAAAGACTTTAGGTAGGTGTTCTCTTTTAGATATGCCTTATAAATAATATTTTTAAAGAAGCAAATTAATGTTATTCTTCTGTACTGGTTTGAATGTTTGCATGTGTGTTGCATTTTCGCATGCTGTGTGACGATGCAATGATGTAGATTTGAACATGTTAATACTTATATACAGCTTTAGTCTAAAGTttactttggttggagtcattaaaagtcatttttcaacca

Function

NR:

description
unique cartilage matrix-associated protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989682.1 True 735 mRNA 0.45 4 53238335 53250903

Neighbor

gene id symbol gene type direction distance location
LOC110524998 NA coding downstream 153612 53077658 ~ 53084723 (-)
LOC110524937 LOC106573065 coding downstream 178389 53047740 ~ 53059946 (-)
LOC118964864 NA coding downstream 218216 53007483 ~ 53020119 (-)
LOC110524896 LOC106573068 coding downstream 282619 52943860 ~ 52955716 (-)
LOC110521107 LOC106573149 coding downstream 419393 52816161 ~ 52818942 (-)
LOC110525034 elk3 coding upstream 47460 53298363 ~ 53310125 (-)
LOC110525078 LOC105021811 coding upstream 86127 53334724 ~ 53338484 (-)
LOC110525089 LOC106573055 coding upstream 122798 53373701 ~ 53384476 (-)
LOC110525255 LOC106573039 coding upstream 462810 53713713 ~ 53758738 (-)
LOC110525178 LOC106581842 coding upstream 510709 53761612 ~ 53774544 (-)
G58596 NA non-coding downstream 33020 53204782 ~ 53205315 (-)
G58523 NA non-coding downstream 190664 53047592 ~ 53047671 (-)
G58519 NA non-coding downstream 206314 53030578 ~ 53032021 (-)
G58518 NA non-coding downstream 209621 53028355 ~ 53028714 (-)
G58659 NA non-coding upstream 44345 53295248 ~ 53296349 (-)
G58672 NA non-coding upstream 94830 53345733 ~ 53347979 (-)
G58613 NA non-coding upstream 133714 53384617 ~ 53386535 (-)
G58694 NA non-coding upstream 143045 53393948 ~ 53400122 (-)
G58717 NA non-coding upstream 172695 53423598 ~ 53423861 (-)
G58565 LOC106561659 other downstream 98031 53139458 ~ 53140304 (-)
G57742 NA other downstream 742101 52495898 ~ 52496234 (-)
G56764 NA other downstream 1491115 51746617 ~ 51747220 (-)
G56372 NA other downstream 1833992 51400727 ~ 51412569 (-)
LOC110524514 borcs5 other downstream 2446266 50777716 ~ 50792069 (-)
G58718 LOC100194703 other upstream 175061 53425964 ~ 53426316 (-)
G58842 NA other upstream 337519 53588422 ~ 53588770 (-)
G58958 LOC106581842 other upstream 540927 53791830 ~ 53797014 (-)

Expression


Co-expression Network