LOC118964886


Basic Information

Item Value
gene id LOC118964886
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53685401 ~ 53686098 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052132.1
AGCAATCATTCCATTGCTGACCCATAGGATGGTAATCACATACATGATTGGCTTAATCTAGAATCATGGATACCTTTCATACCTTCTTATCACAAGTTGGAACAAGTGGTCAACATTGGGACAATGCAGCCATAAATAACATGGAACAATATTTTCATGGAGGGAAGGACAATCTCCATTATGCCATGAACGTTTCATTGCTGAACAACCATGGATATGTTTCCTCTCATTTGGCTCCCGTTCCTCCAACAGTGTGCAAGATCTGCCAGCAGAGCTCACTGGAGCAGGGAGACATCCCGTCATCCTTTTGGCGCCTGACAAAGTACACTTATTTTCTTCTAAATAACACTATAgtaatgtaacggatgtgaaacggctagcttagttagcggtggtgcgcgctataaatagcgtttcaatcggtgacgtcacttgctctgagatcttgaagtagtagggccgtggcttttg

Function

NR:

description
uncharacterized protein LOC110505271 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052132.1 True 471 mRNA 0.44 3 53685401 53686098

Neighbor

gene id symbol gene type direction distance location
LOC110516195 LOC106581842 coding upstream 64568 53598194 ~ 53620959 (+)
LOC110525170 LOC106573051 coding upstream 127792 53491846 ~ 53557609 (+)
LOC110525151 LOC106561689 coding upstream 199848 53437534 ~ 53485553 (+)
LOC110525096 LOC106573053 coding upstream 262647 53399050 ~ 53422754 (+)
LOC110532423 LOC106561694 coding upstream 311939 53355751 ~ 53373462 (+)
LOC110525273 LOC106561706 coding downstream 200822 53886920 ~ 53903845 (+)
LOC110525287 LOC106573038 coding downstream 227830 53913928 ~ 53938476 (+)
LOC110525297 LOC106573037 coding downstream 269697 53955795 ~ 53966503 (+)
LOC110525327 LOC106573036 coding downstream 358715 54044813 ~ 54089850 (+)
LOC118964411 NA coding downstream 556723 54242821 ~ 54249212 (+)
G58855 NA non-coding upstream 50896 53598201 ~ 53634505 (+)
G58849 NA non-coding upstream 88010 53597033 ~ 53597391 (+)
G58845 NA non-coding upstream 94288 53590881 ~ 53591113 (+)
G58843 NA non-coding upstream 95240 53589913 ~ 53590161 (+)
G58852 NA non-coding downstream 27239 53713337 ~ 53713755 (+)
G58906 NA non-coding downstream 73736 53759834 ~ 53760090 (+)
G58907 NA non-coding downstream 74561 53760659 ~ 53760870 (+)
G58909 LOC106581842 non-coding downstream 79082 53765180 ~ 53765412 (+)
G58962 NA non-coding downstream 125985 53812083 ~ 53812369 (+)
LOC118936380 LOC106581842 other upstream 14128 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 2234466 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 3601405 50037523 ~ 50184257 (+)
G53181 NA other upstream 4791489 48893497 ~ 48893912 (+)
G52324 NA other upstream 5302144 48380542 ~ 48383257 (+)
G59031 NA other downstream 302042 53988140 ~ 53988597 (+)
G59963 NA other downstream 1035090 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 2219410 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 2333378 56019476 ~ 56030371 (+)

Expression


Co-expression Network