nat10 (nat10)


Basic Information

Item Value
gene id nat10
gene name nat10
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54464407 ~ 54503021 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605457.2
TTGTCGCATAGTTCTGACGTCATAGCAGGGTCCTTCAGAACCGCCGTCCCCACGTGAGTTTTTTCGGCATGACTGCAGCATGTAAACTAAACTAACTGCTTCCAGAGATTTGTCGTGTTTTCATCTACATTTATTAGTTTAATCCGGATTACACACCAGTGGGTTTACTAACTACGTCAGGGACCACCATGGCAACATTTCGGAAAAAGATAGATAACAGGATCCGTGTCCAGATAGATAATGGCGTTTCCGAGCAACACCGCACCATGTTCGTGGTGGTCGGGGACCATGGCAGAGACCAGGTTGTCATCCTGCACCACATGCTGTCCAAAGCCGCAGTCAGAGCCAGACCATCTGTCCTCTGGTGCTATAAGAAAGAGCTGGGCTTCAGCAGCAACCGAAAGAAGCGCATGCGTCAGCTCCAGAAGAAGATCAAGACCGGCACTCTGAACATTAAGCAAGACGACCCCTTTGAGCTGTTTGTCGCTGCCACTAACATccgctactgctactacaacgaGACACACAAGATTCTCGGAAACACTTATGGCATGTGCATCCTGCAGgacTTTGAGGCTCTCACTCCCAATCTCCTGGCTCGAACTGTGGAGACTGTGGAAGGAGGAGGGATCGTGGTAATTCTTCTCAGGACGGTCAACTCACTCAAGCAGCTGTACACAATGACTATGGATGTTCATTCTCGCTACAGGACCGAGGCCCATCAGGACGTGGTGGGAAGGTTCAATGAGAGGTTCATCCTATCTCTGTCGTCCTGTAAGACGTGCGTTGTCATTGACGACCAGCTCAACGTCCTGCCCATCTCCAGCCACATTGCCAACATCAAGCCTGTTCCTCCCAAGACTCAGGAGGACAGTCTTTCGCCACGGGAACAGGAGCTGAATGAGTTAAAGGAATCTCTACAGGACACGCAGCCTGTTGGTGTGCTGGTGGACAGCTGCAAGACCATGGACCAGGCCAAGGCGGTGCTGAAGTTCATCGAGGCCATCTCAGAGAAGACCCTGCGGAGCACTGTGGCTCTGACTGCAGCTAGAGGCAGGGGCAAGTCTGCAGCACTGGGACTGGCTGTGGCTGGGGCTGTGGCATTTGGCTACTCCAACATCTTCATCACCTCCCCCAGCCCAGACAACCTGCACACTCTGTTTGAATTCATCTTCAAAGGCTTCGATGCCCTTCAATACCAGGAGCACCTGGACTATGAGATCATCCAGTCTCTGAACCCTGAGTTCAGCAAGGCTGTGGTTAGAGTCAACATCTTTAAGGAGCATAGACAGACTATTCAGTACATCCACCCGGCTGATTCAGTGAAGCTGGGTCAGGCTGAGCTGCTGGTGATAGATGAAGCTGCAGCCATCCCCCTTCCTCTGGTCAAGAAGCTGCTCGGACCATACCTGGTCTTCATGGCCTCCACCATCAACGGGTATGAGGGCACAGGTCGTTCTCTCTCCCTGAAGTTGATCCAACAGTTGAGGCAGCAGAGTTCAGAGAGCCAGCAGAGTCTGTCAGCAGAGAACAGGAGCACCAATACAGCCAGGCTAAATGCAGCTCGCTCCCTCCAAGAGGTGTCCCTCCATGAGTCCATCCGTTATGCCATGGGAGACCCTGTAGAGAAGTGGCTCAACGAGCTGCTGTGTCTGGACTGTCTAAACATCCCCAGAGTCATCTCTGGCTGCCCCCTGCCACAGACCTGCGACCTATACTATGTGAACAGAGACACACTGTTCTGCTACCACAAGGCATCTGAAGCCTTCCTACAGAGACTCATGGCTCTCTATGTGGCTTCGCACTACAAGAACTCTCCCAACGACCTGCAGATGTTGTCAGATGCCCCGGCACATCACCTCTTCTGCCTACTGCCTCCTGTTCCTCCCACACAGAACTCACTGCCAGAGGTCCTGGCTGTCATACAGgtgtgtctggaaggagagatcTCTCGTCAGTCCATCCTCAACAGTCTGTCCAGAGGAAAGAAGGCTTCCGGTGACCTCATCCCCTGGACCGTGTCAGAGCAGTTCCAAGACCCCGAGTTTGGCAGTCTGTCTGGAGGCAGGGTGGTGCGCATCGCTGTCAACCCTGACTATCAGGGGATGGGTTATGGCTCCAGAGCACTGCAACAGTTACAGCTGTACTACGAGGGTCAGTTCCCCTACATGGATGAGAACGCACAGACCGCTAACAGCCAGATCACCTCTGTCACCAGCGAGGCGGTGAGCCTCCTAGAAGAGGTGTTGCACCCTAGGAAGGACCTCCCTCCTCTGCTTCTGAAGCTGAGTGAGAGGAGGGCCGAGAGACTAGAATACCTGGGAGTATCCTATGGTCTCACACCTCCGCTGCTGAAGTTTTGGAAGAAAGCTGGTTTTGTCCCTGTCTATTTGCGGCAAACCCCTAACGACCTGACGGGGGAGCACTCGTTGGTGATGTTGAAGGAGCTCAACACAGTGGAGGCTCCTGAACAGGGCCAGTGGCTGTCTGCCTTCTGGAAAGATTTCCGTCGGCGCTTCCTGTCTCTGCTCTCCTACCAGTTCAGCAGCTTCTCTCCCAGTATGGCCCTCAACATCCTGCAGAACAAGAGCACCACCAAGACGGATGCCAGCTCGTCCCTGAGCAGTTCTGAGCTGTCTGGACAGTTCAGCCCCTATGATCTGAAGCGTCTGGAGATGTACTCTAGGAACATGGTGGACTACCACCTCATCATGGACCTCATCCCTGCCGTGGCACGCATGTTCTTCCTCAAACAGCTGGGAGACGTGACCCTGTCCGCCGCACAGTGTGCTCTGTTGCTAGGTGTGGGGCTGCAGCATAAATCAGTTGACCAGCTGGAGAAGGAGATTGACCTTCCCAGCTCTCAGCTCATGGGACTGTTCAACCGCCTCATCAGGAAAGTAGTGCAGTTCTTCAACAGAATCCAGGAGAAGGCCATTGAGGCAGAGATGGTTGTATCTAAAGACATCTCCATGGAGCCCACGGTCAAAACCCTCAATGATGATCTAGATGAGGCAGCCAAAGAGTTCCAGGAGAAACACAAACAGGACATGGAGAAGGTCAAGGAGATGGACCTGCAACAGTACCTGATCCGAGGAGATGAAGAGGAATGGGACCAGGTGTTGAAGAAAGcaggacagacagctgttgtCAGCATAAAGAGTGACAAGAAGAGGAAGTATGAGCAGCCGAGGCCAGACAAAAACGAGGGAGGAGATACACGACACGGCAAActgaagaagaagacgaagaagggAGGAGGCAAGGAGAAGAACAAGTTTGAAAAGAGGCCGTTATAGTGTAAATTATAGTTGTTTTTATATTCGCTTAAAGATTTTATTAgaaatgtagttttttttttcaGATCCACTTTACTAAGTTTCATAACATTTAATTTAGTTTGTCTTATGGACAGAAATAATCCTTTGCATGGAAGGCTGTGAGACGGGttgtatagtgtttgtgttttttgGGATGTCACTGGGGCAGCAATGCACAAACTGCTGGGTCAGGTCTTAGTTTGGGTTTAAAGGTAGATTCAGCGAGATCCCATAGATGCACGAAGTAAACCATGGGAAtgggtcaatttccgcaacaacCAGGAGCGCTGAAGCGTGAGGCTTCTCCGCTGTATTGTTCCCGTAGTTACCCGTGCGCATGCCGCAGATACTCTGTTCAACTGTGAGAGCAGTCTTGCATCATGCTCATCTGAATGGGCGCGTTCGAGCAGCCGCTTTGCATTTCAGGGTTGAAGTTGTCCGACTTGCACCGAATTGTTCATTGCATGGAGTTTTGACTGCAAGTTTCTGCAGTTTCTCTAACTTGATCCTGTAGTCGCCGCCTGCATTGTGGGAAGTtctattgtcaaccaatcattagggtgtttttgtttgaccaaTTTTCCAATAGAGAGAGAttaaatatatacattatattccccaaaatgttttatttaaggCTCTCATTAATTGATTGTACAATGTGTACACATACTCTGTGTGTGATATGGGGGTTAAAAATGTGTTCATCTCGACATTATAAAAAAACCTTTTATAAACACTGCAATGTTGATCAAACCTTGCTGTTAAAAAAACACATTAGTGTCTGACTTTAGGCTGTCGCAGATGCACCTCCCCCGTCTACTGTCGGTTGCTTCTGCCTCACCACGCAAACACGCCCATCATATCTGCGGTGCTGCTAGATCACGCTGAATCTACTTTTATAATTTAAAGTCGGTCTAAATATGATCTGCCAGATCCAGACACTTTAGAAAAGAACAAAACATTAACACCCCATTAGATATTTTCCCCAAAAACAAATGGAACATAATTcataatgttttttatttgtttgagtcaaattggtttaattatttcagtttaaatagttttttcatttattttagtTTACTATAACAACCTTAGTGTACAGCAGTAGGACTGTGCTTTGACCAATGGCAGTGTCACCTTTCTCTGTGCCTAGCCCTGTACCCAAGGGTTAGATGGAATGGGACAGAGTACCATCCATAGTGAAAATGAATCTATTAGACTTTATGTACCCACCACCTGAGGATAGGAGACAGCATACAGTGGTGACAGTTCCACCCATATAAATAGAATAATTATTTGCTATGGTTCCACCACCTGCCTTTTCCTGTACCTACTGTAACCGGCTCATTTAATCCAGTACCAACAATATATGGAGTTGCTTACATTCAGATGAGTTGGAGTCTGCAAGGGTCAACATACTTAAAGATGATTCATTGAATGATGAGCATACGTTTGACTTTTTGTATAATTTGACCATTGTCACCTAGCCTCGATCTTCAGTGAATGGAAAACGTGCCTGCTGTCTGTTCTAGTATTTTTTTTGCGGAGAATGAGTTTCATATGGAAAGTAAAGTGGCCTACCTTTCTACTTACTGGGAGACAAGTACAAATAACTTAATAAAGCAGCATGATGTATGTTTTATTGATTAACTACTTTA

Function

symbol description
nat10 Predicted to enable rRNA cytidine N-acetyltransferase activity and tRNA binding activity. Predicted to be involved in rRNA acetylation involved in maturation of SSU-rRNA. Predicted to act upstream of or within rRNA processing and tRNA processing. Predicted to be located in nucleus. Predicted to be active in nucleolus. Is expressed in several structures, including alar plate midbrain region; immature eye; nervous system; neural plate; and segmental plate. Orthologous to human NAT10 (N-acetyltransferase 10).

NR:

description
PREDICTED: N-acetyltransferase 10

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008080 N-acetyltransferase activity molecular_function

KEGG:

id description
K14521 NAT10, KRE33; N-acetyltransferase 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605457.2 True 4987 mRNA 0.48 27 54464407 54503021
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110525376 LOC106573030 coding downstream 81740 54373111 ~ 54382667 (-)
LOC110525355 LOC106573031 coding downstream 110380 54308050 ~ 54354027 (-)
LOC110525336 pf21a coding downstream 240421 54113139 ~ 54223986 (-)
LOC110525320 snx33 coding downstream 444857 53989527 ~ 54019550 (-)
LOC118964352 NA coding downstream 590171 53872120 ~ 53874236 (-)
caprin1b LOC100195798 coding upstream 1675 54504696 ~ 54570298 (-)
tspan18b tspan18 coding upstream 90182 54593203 ~ 54716059 (-)
LOC110525455 LOC106573025 coding upstream 327805 54830826 ~ 54872325 (-)
LOC110525462 LOC106561729 coding upstream 402336 54905357 ~ 54934644 (-)
LOC110525471 NA coding upstream 460435 54963456 ~ 54966553 (-)
G59794 NA non-coding downstream 5488 54394044 ~ 54458919 (-)
G59721 NA non-coding downstream 167119 54279232 ~ 54297288 (-)
G59720 NA non-coding downstream 204494 54255010 ~ 54259913 (-)
G59625 NA non-coding downstream 278339 54185486 ~ 54186068 (-)
G59672 NA non-coding downstream 282777 54181174 ~ 54181630 (-)
G59956 NA non-coding upstream 196061 54699082 ~ 54705581 (-)
G59957 NA non-coding upstream 201609 54704630 ~ 54711130 (-)
G59959 NA non-coding upstream 214446 54717467 ~ 54717739 (-)
G59965 NA non-coding upstream 217757 54720778 ~ 54721359 (-)
G59966 NA non-coding upstream 218390 54721411 ~ 54721732 (-)
G58958 LOC106581842 other downstream 667393 53791830 ~ 53797014 (-)
LOC110525178 LOC106581842 other downstream 701511 53761612 ~ 53774544 (-)
G58842 NA other downstream 875637 53588422 ~ 53588770 (-)
G58718 LOC100194703 other downstream 1038091 53425964 ~ 53426316 (-)
LOC110525078 LOC105021811 other downstream 1126020 53334724 ~ 53338484 (-)
G59978 NA other upstream 226110 54729131 ~ 54737244 (-)
G60516 NA other upstream 567371 55070392 ~ 55070899 (-)
G60572 NA other upstream 647220 55150241 ~ 55154258 (-)
G60614 NA other upstream 690276 55193297 ~ 55193723 (-)
G60624 NA other upstream 700396 55203417 ~ 55203742 (-)

Expression

nat10(nat10) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
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nat10(nat10) Expression in each Bioproject

Bar chart with 21 bars.
nat10(nat10) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network