Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964914 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 54978911 ~ 55034259 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tumor protein p53-inducible protein 11-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005052176.1 | True | 795 | mRNA | 0.43 | 3 | 54978911 | 55034259 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525471 | NA | coding | downstream | 12358 | 54963456 ~ 54966553 (-) |
| LOC110525462 | LOC106561729 | coding | downstream | 44267 | 54905357 ~ 54934644 (-) |
| LOC110525455 | LOC106573025 | coding | downstream | 106586 | 54830826 ~ 54872325 (-) |
| tspan18b | tspan18 | coding | downstream | 262852 | 54593203 ~ 54716059 (-) |
| caprin1b | LOC100195798 | coding | downstream | 408613 | 54504696 ~ 54570298 (-) |
| LOC110525476 | LOC106573024 | coding | upstream | 37320 | 55071579 ~ 55128270 (-) |
| LOC110525505 | LOC106573040 | coding | upstream | 710148 | 55744407 ~ 55801039 (-) |
| LOC110525190 | LOC106573044 | coding | upstream | 867638 | 55901897 ~ 56147404 (-) |
| LOC110525232 | NA | coding | upstream | 1034946 | 56069205 ~ 56079783 (-) |
| LOC110521481 | LOC106573508 | coding | upstream | 1501410 | 56535669 ~ 56544298 (-) |
| G60097 | NA | non-coding | downstream | 154066 | 54824634 ~ 54824845 (-) |
| G60096 | NA | non-coding | downstream | 155276 | 54823429 ~ 54823635 (-) |
| G60079 | NA | non-coding | downstream | 167382 | 54811112 ~ 54811529 (-) |
| G60071 | NA | non-coding | downstream | 173592 | 54805043 ~ 54805319 (-) |
| G60061 | NA | non-coding | downstream | 180897 | 54797811 ~ 54798014 (-) |
| G60506 | NA | non-coding | upstream | 9596 | 55043855 ~ 55044123 (-) |
| G60517 | NA | non-coding | upstream | 35351 | 55069610 ~ 55069845 (-) |
| G60580 | NA | non-coding | upstream | 136156 | 55170415 ~ 55170726 (-) |
| G60588 | NA | non-coding | upstream | 145651 | 55179910 ~ 55180197 (-) |
| G59978 | NA | other | downstream | 241667 | 54729131 ~ 54737244 (-) |
| G58958 | LOC106581842 | other | downstream | 1181897 | 53791830 ~ 53797014 (-) |
| LOC110525178 | LOC106581842 | other | downstream | 1216015 | 53761612 ~ 53774544 (-) |
| G58842 | NA | other | downstream | 1390141 | 53588422 ~ 53588770 (-) |
| G58718 | LOC100194703 | other | downstream | 1552595 | 53425964 ~ 53426316 (-) |
| G60516 | NA | other | upstream | 36133 | 55070392 ~ 55070899 (-) |
| G60572 | NA | other | upstream | 115982 | 55150241 ~ 55154258 (-) |
| G60614 | NA | other | upstream | 159038 | 55193297 ~ 55193723 (-) |
| G60624 | NA | other | upstream | 169158 | 55203417 ~ 55203742 (-) |
| G61563 | NA | other | upstream | 798566 | 55832825 ~ 55833928 (-) |
