Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110525476 |
| gene name | LOC106573024 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 55071579 ~ 55128270 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021605612.2 | False | 4253 | mRNA | 0.44 | 4 | 55071579 | 55128270 |
| XM_021605620.2 | False | 4250 | mRNA | 0.44 | 4 | 55071579 | 55128270 |
| XR_002473762.2 | False | 4408 | mRNA | 0.44 | 5 | 55071579 | 55128270 |
| TU67137 | True | 2847 | lncRNA | 0.40 | 3 | 55071627 | 55081078 |
55,020,000
55,030,000
55,040,000
55,050,000
55,060,000
55,070,000
55,080,000
55,080,000
55,090,000
55,100,000
55,110,000
55,120,000
55,130,000
55,140,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964914 | NA | coding | downstream | 37320 | 54978911 ~ 55034259 (-) |
| LOC110525471 | NA | coding | downstream | 105026 | 54963456 ~ 54966553 (-) |
| LOC110525462 | LOC106561729 | coding | downstream | 136935 | 54905357 ~ 54934644 (-) |
| LOC110525455 | LOC106573025 | coding | downstream | 199254 | 54830826 ~ 54872325 (-) |
| tspan18b | tspan18 | coding | downstream | 355520 | 54593203 ~ 54716059 (-) |
| LOC110525505 | LOC106573040 | coding | upstream | 616137 | 55744407 ~ 55801039 (-) |
| LOC110525190 | LOC106573044 | coding | upstream | 773627 | 55901897 ~ 56147404 (-) |
| LOC110525232 | NA | coding | upstream | 940935 | 56069205 ~ 56079783 (-) |
| LOC110521481 | LOC106573508 | coding | upstream | 1407399 | 56535669 ~ 56544298 (-) |
| smoc2 | smoc2 | coding | upstream | 1663351 | 56791621 ~ 56873384 (-) |
| G60517 | NA | non-coding | downstream | 1734 | 55069610 ~ 55069845 (-) |
| G60506 | NA | non-coding | downstream | 27456 | 55043855 ~ 55044123 (-) |
| G60478 | NA | non-coding | downstream | 55931 | 55011079 ~ 55015648 (-) |
| G60097 | NA | non-coding | downstream | 246734 | 54824634 ~ 54824845 (-) |
| G60096 | NA | non-coding | downstream | 247944 | 54823429 ~ 54823635 (-) |
| G60580 | NA | non-coding | upstream | 42145 | 55170415 ~ 55170726 (-) |
| G60588 | NA | non-coding | upstream | 51640 | 55179910 ~ 55180197 (-) |
| G60623 | NA | non-coding | upstream | 74770 | 55203040 ~ 55203262 (-) |
| G60629 | NA | non-coding | upstream | 77749 | 55206019 ~ 55206260 (-) |
| G60630 | NA | non-coding | upstream | 78131 | 55206401 ~ 55206635 (-) |
| G60516 | NA | other | downstream | 680 | 55070392 ~ 55070899 (-) |
| G59978 | NA | other | downstream | 334335 | 54729131 ~ 54737244 (-) |
| G58958 | LOC106581842 | other | downstream | 1274565 | 53791830 ~ 53797014 (-) |
| LOC110525178 | LOC106581842 | other | downstream | 1308683 | 53761612 ~ 53774544 (-) |
| G58842 | NA | other | downstream | 1482809 | 53588422 ~ 53588770 (-) |
| G60572 | NA | other | upstream | 21971 | 55150241 ~ 55154258 (-) |
| G60614 | NA | other | upstream | 65027 | 55193297 ~ 55193723 (-) |
| G60624 | NA | other | upstream | 75147 | 55203417 ~ 55203742 (-) |
| G61563 | NA | other | upstream | 704555 | 55832825 ~ 55833928 (-) |
| G61715 | NA | other | upstream | 1025160 | 56153430 ~ 56153918 (-) |
