habp2 (habp2)


Basic Information

Item Value
gene id habp2
gene name habp2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 58591107 ~ 58599375 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605965.2
CTTAGTCAATAGAACGGTAGTGAGCGGTGAGAGACCTAGATGCCAAAGCACTCTGTGCATACAAAGGTTAGTCTTCCCACACAAATGGTTGGGAAATGATGTGGGTGATCTGACAGAATTACTCTTCTAGCCGCACACAATCACTGCCATCATGAACTCCAAGCCTCTTTTCTTCTGCCTCTTCCTTGTATTGCTAATTCTACCTGTTCAATTACGTAAACAAGAGAAGCATGGAAAACATCCGAAACCGGAAAAACACAGCAAAAAGCCTGAAAGAAAGTACAGAAGACACGAGGATATTCTGAAGGATCCATTCTTTGAGATCGTAGACGAACCAGGTGAGGACGATAGTGATGATCCTGACTGGCTTTATGAACTCCAAGAACCAGATGGCCAATGCAACCCAAACCCTTGCCTCAATGACGGTGTGTGTGAGGAGAAGGGAAAGAGAAGGTTCAAATGTGACTGCCCCAAGCCATTCAAGGGCAAGAAGTGCCAGAAAGGGCCCAAAAGGTGTAAGAGGGGCACATGTGGTCGTGGCGAGTGTGTGTTGACCTCTAAACCACCTTTCTACGCGTGCAAGTGCAAGCAGCCCTTCCTGCCCCCAGACTGCAAATCACTTGCGGTGTGTCAGCCTAACCCCTGTAAGAATGGAGGCTTGTGCGTCAAGGATGGCATGGACTTTGACTGCCTCTGCCCAGAAGGCTTCAGTGGACGTTTCTGTAATGTTGGCCCAGATGACTGTTACAAGCTCAAGGATGACGGGGAGTCATATCGCGGCAATGTGAGTGAGACAGATTATGGAGAGGAATGTCTCTACTGGAACTCCCATTTCATCCTGGAGAAAGGCTCTGATCCCTTCAATGACTTTGAGGATGACGATGGACTAGGCCCTCATAACTTCTGCAGaaacccAGATGGTGACACTCAGCCATGGTGCTTCATAAGAAGAGGGCGGGTGCTGCTGTGGGATCACTGTGGCGTTAGGGAGTGTGCTAAGCCCACAGCCATGGTCACAACAGATGCTGGTCCTAAGCCTACTACTGGTCCGAAgcccactactacaactactacaactatcaAGCCTACTACTCGTCCCaaaaccactactacaactactactacaacacccAAGGCTGAAccaacaccggccaaaccctcagcGGGTCCAGAGAAACCTACAGCGCCAAAGCCCAGTGGAGCCCCACGACAGACCACAGCTAGCCCCACCTCTGATAAGCAGTTCACCACCTGTGGAAAGCCCCAGCCGAAGAAGGCCATCACCAGGATCTACGGAGGCTTGAAGGCCGTCCCTGGAGCCCAACCCTGGCAGCTGTCCCTGCAGGTCCGACCCAAGGGCTCCAGCCAGGCATACAGGCACATCTGTGGAGCGGTGCTCATCGATAGCTGCTGGGCTCTGACTGCCGGCCACTGCATTGATCCAAAGGACCAGATGCAGGTGGTGGCTGGGAGTCTGACTCTAGGAAAAGATGTGCCCATTGGGCAGACGATCACAGTGGAGAAAGCTACAAGGCATGAGAATTACAAGGAGACACCCACAGCTGTTTACAATGACATAGCGGTGCTGAAGCTGAAGGCCACAGATGGTCACTGTGCCAGAGAGAGCCAGTTTGTGAAGGCAGCCTGCTTGCCTGATAGCCTATTCCCTGATGGGACTGAGTGCACCATCTCTGGATGGGGCGCTACTGAGGACTCTGACTACGGCTCCAACCACCTACTGGATGCCCAGGTGCTGCTGATCAGCCAGGAGAGCTGCTCAAGCAGCAAAGTCTATGGAAGCGCCATAGACAACACCATGTTTTGTGCCGGTTACCTGCAGGGAGGAGTGGACTCCTGCCAGGGTGACTCTGGAGGGCCACTGACGTGTAACAAGGAGAGCTCCCATTTCATCTACGGTATAGTGAGCTGGGGAGACCAGTGTGGGTTGAAGAACAAGCCTGGGGTCTACGCACGGGTCTCCCATTACCTTGACTGGATCAAGTCAAAGACACAAGCAGCATAGCTGGGCTATGCCAGTCCATGCAGTTGCAGGCACTAAAAAGTTTGATTACGGCACGGTATTGGCAGAACAATTCCTCAATGCATATGCAACATGGTGCTTTAGTGCCTTCTAGCGGTAGTTTATCACAAAAACCCTGCAGTAGCAAGTGCTAAAATAAGTGTCTCTTAATTGGACCGCTACTGAGTAATCATTGATTTATGTTTGAATATAGCTGACATGCTGTCATTCCAGGATATAAAATTACTGATTTGACTGTAAGAGAACAAAACCATTAAAACGTCCCTCTATGGACCTTCCTGCAAAGATGGGGATTCTGAA

Function

symbol description
habp2 Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to act upstream of or within blood coagulation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Is expressed in liver. Human ortholog(s) of this gene implicated in thrombophilia due to thrombin defect and thyroid gland papillary carcinoma. Orthologous to human HABP2 (hyaluronan binding protein 2).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K08648 HABP2; hyaluronan binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605965.2 True 2341 mRNA 0.51 13 58591107 58599375

Neighbor

gene id symbol gene type direction distance location
LOC110525605 LOC106576888 coding downstream 21860 58565230 ~ 58569247 (-)
LOC110532479 ate1 coding downstream 56011 58353645 ~ 58535096 (-)
LOC110525582 fgfr2 coding downstream 308302 58166565 ~ 58282805 (-)
cdh23 cdh23 coding downstream 1030683 56904609 ~ 57560442 (-)
smoc2 smoc2 coding downstream 1717723 56791621 ~ 56873384 (-)
ablim1a LOC106576884 coding upstream 14779 58614154 ~ 58760541 (-)
LOC110525667 LOC106576882 coding upstream 238886 58838261 ~ 58914347 (-)
LOC110525690 LOC106576880 coding upstream 325205 58924580 ~ 59134329 (-)
LOC110525695 LOC106576879 coding upstream 544998 59144373 ~ 59199471 (-)
LOC110525737 LOC100196663 coding upstream 613205 59212580 ~ 59248510 (-)
G64988 NA non-coding downstream 4429 58585286 ~ 58586678 (-)
G64938 NA non-coding downstream 161657 58429150 ~ 58429450 (-)
G64748 NA non-coding downstream 239363 58347293 ~ 58351744 (-)
G64891 NA non-coding downstream 254027 58336727 ~ 58337080 (-)
G64886 NA non-coding downstream 261151 58329735 ~ 58329956 (-)
G65057 NA non-coding upstream 64575 58663950 ~ 58664149 (-)
G65058 NA non-coding upstream 65032 58664407 ~ 58664627 (-)
G65060 NA non-coding upstream 70159 58669534 ~ 58671224 (-)
G65072 NA non-coding upstream 88652 58688027 ~ 58688267 (-)
G65074 NA non-coding upstream 93874 58693249 ~ 58693465 (-)
G63328 NA other downstream 1192619 57397194 ~ 57398488 (-)
G63093 NA other downstream 1528259 57035667 ~ 57062848 (-)
G61978 NA other downstream 2057132 56524970 ~ 56533975 (-)
G61715 NA other downstream 2437189 56153430 ~ 56153918 (-)
G61563 NA other downstream 2757747 55832825 ~ 55833928 (-)
G65147 NA other upstream 185367 58784742 ~ 58785617 (-)
LOC110526097 LOC106576849 other upstream 1830832 60430184 ~ 60495300 (-)
G68736 NA other upstream 3082903 61682278 ~ 61686308 (-)
LOC110526417 LOC106576819 other upstream 3382356 61981652 ~ 61983330 (-)

Expression


Co-expression Network