XLOC_019774 (PRRG3)


Basic Information

Item Value
gene id XLOC_019774
gene name PRRG3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 37941347 ~ 37963141 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00038921
GTCTATGAGTTATTTGCCTTTTTTTAGTCTATGGTTCGTTTGACCCATTGGTTTGACCTCACACAAATACTGTgtgtaaataatacatatataacaaAACTGATTTGTTAGACTTAACGTTACTTTAACCAAAGCTAAATGTAAAGTTCGGTCGAATGTGTTGTAACATAAGACTTACCTTTTAGCATCTGCTTGTATGGATGTACATTATATTAATGCATTTATCAGTATATCATACACATCgtttaactactgtaaaaatataGTATGCCACCGTACAAAATAACATACATACAGTATTACAGTAGTGGAAAATCCAACGGTTGgtgtaaaacaacatttaagacgtTTATGATTTTACAGCTCagccatatttttttaaatgtgattttaaagtttaatttgctaCCTTTTATGATAAAAACACCACATAGCTATATTACACACGACTATCGGTTTAGCATTATGGGTAATGCTGTCTTTTTGCACAAGGCGTGGCATCGAGAGGGACCCCTTACTCTTTCTAGTTACCATCCGCTTTCTCTTATTAAAACGACATTTGGTGGCACTCCACGACCATGAcgatgaaaataaaacattgacgTCCAGTCATAAATACGCAACGGTTTCTAGAAACTATTTCTGATAACTGTATACGTGCGCACAAACAGACTACACTACCCAGCGTATTTGCCCCCATTCCCCAAGAAGTATGACTTTGCGTGTACGAAAAAAAAACGGGTATTCATTGGATATCCAGGGGGAATCCTCGGCTCCTATTGGTCTATTCTCATGTCAATCAAACAGCATCCGTGACTCATGTGGGTGCTCCCTCGCTGGAAACAGGGATGGAATGGACGAGCAAGTGCAACATCCTGGAAGGTCAAAATTCTTCAGACTGAGTTCTCCTGAGGTAGTATGGCAGCAGCGTTTCTAGATGGCAAGGATGCAAACTCTCTTCTTAAACGTTTTCGGCGGGCAAACGGTTTCTTGGAGGAGTTCCGGCAGGGCAACATCGAGAGGGAGTGTGCTGAGGAGAGCTGCAGTTTTGAGGAGGCCAATGAAGTATTTGAAAACAAGGAACAAACGATGGAGTTCTGGAAAAACCGCAGCATCTACACAGTGAATAGCAATGCCGATTCAAACTCCGAGCGGCTGGACTTTGGGAACATGGTGGTGCCCCTGGTGGGCGTGGCTGTCATTATCATCGCGCTCTTCATCATCTGGCGGCTGTCCATCACTCGCTGGCGTCTGGCCTACACCCAGAACCGCTATCTGGCAAACCGGAACACCCGCAGCCTCCCTCGCATCCTGGTGCACCGCGACCCACTCTCACATTCAGAGAACTTCCACGCCAATGACAGGCTCAGTGTGGTGGTCAGCGGCACCGAGCGGAATGGGTCTTCTCTCGCCACCCAAGACGCTCGCCATCACACCGGCCACTCACAGAACAATCGCTCGCTATATGTTCAAGATCCATCTTTATCTGTGGCCTCCCAGTTGTCTGGGGCGACCCCGCCACCATCCTACGAGGAAGTCACAGGGCATTTAGAAAGCAGCAGCGATGAGACGACAGTTCCATACAATGATCCTCCACCAAAATATGAGGAGATTGTGCTAGAAAACTTGTGCTCGAACTAG
>TCONS_00038922
CTCTCAGCGTTTCTAGATGGCAAGGATGCAAACTCTCTTCTTAAACGTTTTCGGCGGGCAAACGGTTTCTTGGAGGAGTTCCGGCAGGGCAACATCGAGAGGGAGTGTGCTGAGGAGAGCTGCAGTTTTGAGGAGGCCAATGAAGTATTTGAAAACAAGGAACAAACGATGGAGTTCTGGAAAAACCGCAGCATCTACACAGTGAATAGCAATGCCGATTCAAACTCCGAGCGGCTGGACTTTGGGAACATGGTGGTGCCCCTGGTGGGCGTGGCTGTCATTATCATCGCGCTCTTCATCATCTGGCGGCTGTCCATCACTCGCTGGCGTCTGGCCTACACCCAGAACCGCTATCTGGCAAACCGGAACACCCGCAGCCTCCCTCGCATCCTGGTGCACCGCGACCCACTCTCACATTCAGAGAACTTCCACGCCAATGACAGGCTCAGTGTGGTGGTCAGCGGCACCGAGCGGAATGGGTCTTCTCTCGCCACCCAAGACGCTCGCCATCACACCGGCCACTCACAGAACAATCGCTCGCTATATGTTCAAGATCCATCTTTATCTGTGGCCTCCCAGTTGTCTGGGGCGACCCCGCCACCATCCTACGAGGAAGTCACAGGGCATTTAGAAAGCAGCAGCGATGAGACGACAGTTCCATACAATGATCCTCCACCAAAATATGAGGAGATTGTGCTAGAAAAGTGA

Function

symbol description
prrg3 Predicted to enable calcium ion binding activity. Predicted to be located in extracellular region. Predicted to be integral component of membrane. Predicted to be active in plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000079102

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00038921 False 1641 mRNA 0.45 5 37941347 37963141
TCONS_00038922 True 708 mRNA 0.54 2 37948422 37951819

Neighbor

gene id symbol gene type direction distance location
XLOC_019773 FO704750.1 coding downstream 7514 37915193 ~ 37933833 (-)
XLOC_019772 gabrb4 coding downstream 51620 37787805 ~ 37889727 (-)
XLOC_019771 mpp1 coding downstream 207776 37668173 ~ 37733571 (-)
XLOC_019770 ndfip1l coding downstream 279777 37637679 ~ 37661570 (-)
XLOC_019769 NA coding downstream 308639 37594351 ~ 37632708 (-)
XLOC_019775 ripply1 coding upstream 3792 37966933 ~ 37973819 (-)
XLOC_019776 rbm41 coding upstream 33681 37996822 ~ 38031138 (-)
XLOC_019777 BX530030.1 coding upstream 100056 38063197 ~ 38063314 (-)
XLOC_019778 klf5l coding upstream 165736 38128877 ~ 38153824 (-)
XLOC_019779 NA coding upstream 494142 38457283 ~ 38463146 (-)
XLOC_019768 NA non-coding downstream 359233 37578746 ~ 37582114 (-)
XLOC_019765 BX649250.1 non-coding downstream 868267 37072951 ~ 37073080 (-)
XLOC_019757 NA non-coding downstream 1885940 36054484 ~ 36055407 (-)
XLOC_019755 NA non-coding downstream 2291251 35645538 ~ 35650096 (-)
XLOC_019782 NA non-coding upstream 666167 38629308 ~ 38632907 (-)
XLOC_019791 CU442763.1 non-coding upstream 1304084 39267225 ~ 39267306 (-)
XLOC_019793 NA non-coding upstream 1364962 39328103 ~ 39337096 (-)

Expression


Co-expression Network