fuom (fuom)


Basic Information

Item Value
gene id fuom
gene name fuom
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 59342322 ~ 59348237 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606236.2
CTTCCTGTGTTAGACTAATCAAATAGCCTACAAGCACTCTGATCTCATGACTTACTTCCTGGTCGTATTTTTCCTTCTGTGAAGTGCCTGTGTTATCGAACCTGCTACTATGGTTATTCTAAAAGGAATACCGTCCATTCTGTCGCCAGAGCTGCTGTATGCCCTGGCCAAGATGGGCCACGGAGACGAACTGGTTCTGGCTGATACAAACTTCCCTACCTCCTCCACCTGCACCTGCGGTCCCATTGAGATCCGAGCTGATGGTCTCGGGGCTGCTGAGCTTTTGGAGGCCATTTTGAAGCTATTGCCCCTGGATACCTACGTTCCCAGCCCGGCTGCCGTGATGGAGTTGGTGGACAGTGACAAAAAAAGGGGACTAGCCACTCCTGTATGGGATATCTTCAGACAGAAGCTGGCACATGCTGGGGTACAGTTATTGTGTGTTCTGTGTCCAGGCTCCTCTAGAGAAGGTGGAGAGATTTGCATTCTATGAACGAGCCAAGAAAGCCTTTGCTGTTGTAGCAACTGGGGAGACAGCTCTCTATGGGTGCCTGATACTGAAGAAGGGAGTCATCCCGGGTGAACTACTAGATTGACACACAACAATTAATGTTATCGACGGGGCACAACCAAATTTTGCATTACCTAACAAATTACCTAAGAATTTGAGTTTGCATGTTTCTGAGAAACatctagtttaaaaaaatatattattttaatgTTGATGTCAAGATCCATCTGAAATCTAAAATGCAATGTATCAATTGTAAATAAACAATTTAGTGATTTTTCTATTCGTA
>XM_021606228.2
TTCCTGTGTTAGACTAATCAAATAGCCTACAAGCACTCTGATCTCATGACTTACTTCCTGGTCGTATTTTTCCTTCTGTGAAGTGCCTGTGTTATCGAACCTGCTACTATGGTTATTCTAAAAGGAATACCGTCCATTCTGTCGCCAGAGCTGCTGTATGCCCTGGCCAAGATGGGCCACGGAGACGAACTGGTTCTGGCTGATACAAACTTCCCTACCTCCTCCACCTGCACCTGCGGTCCCATTGAGATCCGAGCTGATGGTCTCGGGGCTGCTGAGCTTTTGGAGGCCATTTTGAAGCTATTGCCCCTGGATACCTACGTTCCCAGCCCGGCTGCCGTGATGGAGTTGGTGGACAGTGACAAAAAAAGGGGACTAGCCACTCCTGTATGGGATATCTTCAGACAGAAGCTGGCACATGCTGGGGTACAGGCTCCTCTAGAGAAGGTGGAGAGATTTGCATTCTATGAACGAGCCAAGAAAGCCTTTGCTGTTGTAGCAACTGGGGAGACAGCTCTCTATGGGTGCCTGATACTGAAGAAGGGAGTCATCCCGGGTGAACTACTAGATTGACACACAACAATTAATGTTATCGACGGGGCACAACCAAATTTTGCATTACCTAACAAATTACCTAAGAATTTGAGTTTGCATGTTTCTGAGAAACatctagtttaaaaaaatatattattttaatgTTGATGTCAAGATCCATCTGAAATCTAAAATGCAATGTATCAATTGTAAATAAACAATTTAGTGATTTTTC

Function

symbol description
fuom Predicted to enable fucose binding activity and racemase and epimerase activity, acting on carbohydrates and derivatives. Predicted to be involved in fucose metabolic process and fucosylation. Predicted to act upstream of or within monosaccharide metabolic process. Is expressed in blood. Orthologous to human FUOM (fucose mutarotase).

NR:

description
fucose mutarotase isoform X1

GO:

id name namespace
GO:0005996 monosaccharide metabolic process biological_process
GO:0016853 isomerase activity molecular_function
GO:0048029 monosaccharide binding molecular_function

KEGG:

id description
K02431 fucU, FUOM; L-fucose mutarotase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606236.2 False 800 mRNA 0.45 6 59342322 59348237
XM_021606228.2 True 769 mRNA 0.45 6 59342330 59348236

Neighbor

gene id symbol gene type direction distance location
spef1 spef1 coding downstream 24198 59310306 ~ 59318124 (-)
LOC110525737 LOC100196663 coding downstream 93812 59212580 ~ 59248510 (-)
LOC110525695 LOC106576879 coding downstream 142851 59144373 ~ 59199471 (-)
LOC110525690 LOC106576880 coding downstream 207993 58924580 ~ 59134329 (-)
LOC110525667 LOC106576882 coding downstream 427975 58838261 ~ 58914347 (-)
echs1 echs1 coding upstream 1319 59349556 ~ 59368121 (-)
mtg1 mtg1 coding upstream 31575 59379812 ~ 59398680 (-)
si:dkey-275b16.2 paox coding upstream 57907 59406144 ~ 59422417 (-)
rassf4a rassf4 coding upstream 90348 59438585 ~ 59507068 (-)
tmem72 tmem72 coding upstream 163316 59511553 ~ 59516732 (-)
G65751 NA non-coding downstream 7295 59334780 ~ 59335027 (-)
G65747 NA non-coding downstream 14049 59327995 ~ 59328273 (-)
G65746 NA non-coding downstream 14846 59327148 ~ 59327476 (-)
G65745 NA non-coding downstream 16272 59325850 ~ 59326050 (-)
G65744 NA non-coding downstream 17028 59324636 ~ 59325294 (-)
G65815 NA non-coding upstream 105796 59454033 ~ 59458719 (-)
G65817 NA non-coding upstream 111816 59460053 ~ 59465429 (-)
G65851 NA non-coding upstream 167310 59515547 ~ 59515901 (-)
G65857 NA non-coding upstream 177629 59525866 ~ 59526216 (-)
G65862 NA non-coding upstream 184641 59532878 ~ 59533090 (-)
G65147 NA other downstream 556705 58784742 ~ 58785617 (-)
G63328 NA other downstream 1943834 57397194 ~ 57398488 (-)
G63093 NA other downstream 2279474 57035667 ~ 57062848 (-)
G61978 NA other downstream 2808347 56524970 ~ 56533975 (-)
LOC110526097 LOC106576849 other upstream 1081970 60430184 ~ 60495300 (-)
G68736 NA other upstream 2334041 61682278 ~ 61686308 (-)
LOC110526417 LOC106576819 other upstream 2633494 61981652 ~ 61983330 (-)
G69210 NA other upstream 3063285 62411522 ~ 62418296 (-)
G70013 NA other upstream 3928971 63277208 ~ 63277752 (-)

Expression


Co-expression Network