drgx (LOC106576867)


Basic Information

Item Value
gene id drgx
gene name LOC106576867
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 59786129 ~ 59793763 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606368.2
GGCAGCAAGAGCTGAAAGCCTCAACTCGCCGAAGACATCTGGacactcccagagagagagaaaggcagagtagATACACTCAGATAGGGATGgtgtgggggaaagaggggagtgagtaagagaggttgtagagagagaTAGTGACTGTTAAAGTGGATTTGCCGGTCCCTCAGACATACAGGAAACTCTTCGCGTCCTCAGCATCCTCTCCTCCTCGCGCCCTGGACCAGCACAAGACAAATACACAGCAGATTTCTCAGTGACATCGGGCTTTCGTACACAGCTCCATAGATAAACAAAGCCCATAAAACCATCATGTTTTACTTTCATTGTCCCCCTCAGCTGGATGGAGAATGCTGTCGGACTAATACGTTGAACACCAACGGGTTTGCCAACCATGCCTCAGCAGGTGATTTTGATGACGGCTTTCTGCGGAGAAAACAACGTAGAAATAGGACAACATTTACTCTACAACAGTTGGAAGCTTTGGAAGCTGTCTTCGCGCAGACTCACTACCCGGATGTTTTCACGCGCGAGGAACTGGCCATGAAGATCAACCTGACGGAGGCGCGTGTCCAGGTGTGGTTCCAGAATCGCAGGGCcaagtggagaaagacagagagagggagtacagACCCTGACGGAGGGAAGGAGCAGATGAACGAGGGAGGCACTCCTCCGTCCAGGAGTCTGAACTCCCAGTCTCCTGTGGATCAGAGCAGGAAACAGAAGGAACCTTTGGAGATGCAGCAAAGtatAAACCGAGCGGTGGGTCCTGGTGGTCCGTTCTTCCCCTCCTGTCTACCAGGAACCCTCCTGAACTCAGCCACCtatgcccaggctctgtcacatgTTGCCACAATGAAGGgAGGTGGTCTGTGCTCATGCTGTGTTCCTGACCCCATGGGCCTGTCCTTCTTGCCCCCCTATGGTTGTCAGGGCAACCGTACGGCCAGTGTGGCAGCCCTGAGGATGAAGGCCCGGGAGCACTCCGAGGCCGTGCTACAGTCAGCCAACCTGCTGGGGGCCGGCCACGGGCATGGGACTGGAGTAGGAGGCATGTCGGTGCTTGGGGTGTCTGGTGCTGGGTTGACGAGGCCTGGGATGGGCCCTGCCCTGGGAGTAGTATCTGGATCAGTGTTGGGAGTCTCTGGAGCCGTGGGGAGAGGCTCCAGAGACGAGGCTCCCAGCCCAGGCTCCAAGACCCCGACTCAGGGTACCGGGTCTGACAAACACCCCCTCTGCCCCAAGGAACCACTGGAGAAaaagtgagtgtgtctgtgtcgcCGCCCAGAGGAGACAGACGTGCAGACAGTGTGGATGTACAGACGGAAGGACTGGGACTTAAAACTCCTGTGGTGTGAATGTGCCTCCTGTTACAActactctccctctacctactCCTCCTAAAGCACAACTATGGACCTAGTCCTATTACTactggagcagggagaggagtggCTACCCAGATATCATACTCTATGGATTCAACTATCAAGATATTGTAtgactgtgatttatttattgtGGGTGAATATTGCTGAATATCGTGGGGCCGTTGCGGTCCCCTTATAAGCACACGTACTGTACGTAGCTCATGGACTCTACATGAACTCTGAATAAACTGTGTGTGATGGAGACTACCACCCTGGCTAATAATGTGAATCTGAGgcatttccccttctctctcatcttGGCCACACGCTCTCCCCTGTGTATTAGGGTATTGTGTTACAGAAAGTCACCAGACAATGTAACATGTTATGTTCCTCTTTTTTTAAAACATATGTAAAAACACAATGTGAAATATTGACACTTCTATAGTTTTCACTGGAGTCATGGTCATCCGTGTTCAGGTTTTTAAGCCAGCGGCCAGAGAGAACGCTAACTACTGATTTATTTATGTCTCGTTTAACTGACAGTGGCAGTGTACATGAATCAACGTATTTGCTTTCACATCGATGTTAAAGTGCCACAGTTGAAGCTAATGTTGCTCTGTGGTCCCTTGGCTACGCTAACAGGGTAGGCTAACAGAtatgatgacacaacagtggtgttGATATCAGGGCTTTTGCTAATAGCAGTCTGTTAGCACGTCTGTGGCATTACTAGCGTTAGCCGACCCTGGATCACTTTAGTCCTGTTGTGACATGTTCTCTAAAACAATTAAAGATGTAGTCTCTCCTGTTGCCTACCGCCACGGCCATCTGCTCCTATCCATTATTCATCAGTTTCCCTTAAAACTGGAGAAACTAGAGAACACCACTcataacctcctctctctctctctctcgctcgagACGCATCGCCAGGTTACAATAGCCCATTAAACATGATACATGCTATTTATTAACACTAAAATGTATATTTACAAAACGATGGGCCTTTAAACCCAGAGGCTCATTCATGGTTCATCAGTGATAGTTGATTTATTAATTTagcctttaaaaaatatattaaacctCTTTTCTGTGTTGTCTTTCACCAGATCGGCTAATAAGACATAAACCAATCAGATTGAGAAAACTTAATCGCATGAAGAGAGAGTACACAGAGACCAGGATTTAGGCTGATTCAATTTGAGTCCTTGAGGATTTTCAGGAAATTACTTTTGATAATCAATAACACAATTAAGTCAACTACACACACATTAGCATGAATAATTGATGGTGAATTATGTATTACCACAAAGTACTGGGTTAATAATTAATGATGAGGGAGACACCCCGGTGACATGGAGGAGGGAGATAATGTCAGAAGTCCTGGCTCGAGCACTCACACTCTTTtattctctctattcctctatctttctctccccctaTTTATCTTGTTCTCTATCTATTTGTCTCTATATTTCTCCCTGTATCttctttttgtttctctctctttattcatctgtcctcctctctcttctctatcgcTCTCATCTTTCGCAATTAAATGTTCTGCATGCTGTGCATAGTTCATATATATGAATAAAGTGAAGACTTAATTGGATCTTTGAGTCATCGAGTTATACTGTTATAAAGTGAAGACTTCATTGAAGCTTTGAGTCACTGGGTTAAATTGTTAGTGTGCTTATATCAGCAAGACCACTCATGATCTGTGGaggctgcttcttcttcttcttctatcttTATGGGTTATTTTGTTCTATCACTCTTTAAACAAGACAAGCAAAATCTTCCACGAAACAAATAGCCGTGCATGTAGTTTGAGTTTGCATGATTATACTCTAAAATCGGAGTAAAACGTTTGACCATTATTTAGTGATTGAGTTTTCCAAACCATTCATGTAACATTTAAATCTTGGCCAGGTTCGTATAGTGAGGAAAGGCAAGTTCaacaatttttttgtatttttgatTTACGCCAGTATTGTTTTCTTTTTcagaatataaataaatatatatacagtaccagtcaaaagtttggacacatat

Function

NR:

description
dorsal root ganglia homeobox protein

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0007275 multicellular organism development biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K24895 DRGX, PRRXL1; dorsal root ganglia homeobox protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606368.2 True 3443 mRNA 0.45 7 59786129 59793763

Neighbor

gene id symbol gene type direction distance location
ercc6 ercc6 coding upstream 7392 59725618 ~ 59778737 (+)
cxcl12a cxcl12a coding upstream 157875 59589595 ~ 59631391 (+)
LOC110525860 NA coding upstream 177710 59599905 ~ 59608419 (+)
cxcf1a cxcf1a coding upstream 300247 59483481 ~ 59485882 (+)
si:ch211-217g15.3 LOC106576876 coding upstream 443853 59340539 ~ 59342276 (+)
lrrc18a LOC106576925 coding downstream 128912 59922675 ~ 59927138 (+)
si:ch211-223a10.1 LOC106576865 coding downstream 175749 59969512 ~ 59993651 (+)
LOC110525930 LOC106576864 coding downstream 205647 59999410 ~ 60018695 (+)
LOC110526033 LOC106576855 coding downstream 389452 60183215 ~ 60218672 (+)
LOC118966766 NA coding downstream 423358 60217121 ~ 60217262 (+)
G65572 NA non-coding upstream 250168 59535403 ~ 59535961 (+)
G65519 rassf4 non-coding upstream 338321 59439236 ~ 59447808 (+)
G65488 NA non-coding upstream 393639 59391152 ~ 59392490 (+)
G65458 echs1 non-coding upstream 418111 59355120 ~ 59368018 (+)
G65724 NA non-coding downstream 10491 59804254 ~ 59826592 (+)
G66057 NA non-coding downstream 44128 59837891 ~ 59838094 (+)
G66081 NA non-coding downstream 68949 59862712 ~ 59862927 (+)
G66082 NA non-coding downstream 69267 59863030 ~ 59863267 (+)
G66094 NA non-coding downstream 75680 59869443 ~ 59869818 (+)
G65442 NA other upstream 461000 59324636 ~ 59325129 (+)
G64338 NA other upstream 1085750 58699296 ~ 58700379 (+)
G64315 NA other upstream 1120223 58665334 ~ 58665906 (+)
G64292 NA other upstream 1198544 58586858 ~ 58587585 (+)
G63959 fgfr2 other upstream 1562999 58221522 ~ 58223130 (+)
G66188 NA other downstream 147723 59941486 ~ 59942064 (+)
G67806 LOC106581772 other downstream 1521111 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 1936002 61729765 ~ 61733388 (+)
G70011 NA other downstream 3481200 63274963 ~ 63275296 (+)
LOC110526969 stk32c other downstream 5015826 64809255 ~ 64946164 (+)

Expression


Co-expression Network