si:ch211-223a10.1 (LOC106576865)


Basic Information

Item Value
gene id si:ch211-223a10.1
gene name LOC106576865
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 59969512 ~ 59993651 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981213.1
AGGCGGGGTCTGTCCTGCCAACTGCAGTCTAATCTAACGTGAACGTAGCATGCGTGACTGCAGACAGTTTAAAGACAACCACAAAAAAATCAAAATCCTTGATAGACAAGGGTCTTTACTAAATGAACGTATGATTGTTGTTACAATGTATCGTCTCTGTAAAGATGTGTTGTTTACATTGACAGAGTGATAGTCAGGCGTCACATTATTCGCATTATGCATCCGATGCCTAGGATCGACGGGGACATTTTTGACTGTATCCAACGAGGGAACATTGATCAGTGTGCACATTTCATTGAACATGATCGATCTATCCTCAAAGAGAAAGGCTGGGGTGGTTTCACTCCTCTCCACTTTGCGGCCCTCCAAGGTAACCGTTGGATAGTTAACCTGTTGCTAAGCAATGGAGCTGACCCCAACCTGACCTGTGATGCAGGAATGACGGCCTTCCATTTAGCCTGCAGGCATGGTAATGTATATGTGATGCACCAGATTATGCAGCATGGAGCTGATCTACGCATAGTAGACCATCAGGGAAAAACCGCCCTACACCATGGAGTGTCTGGAGGCAAcatTGTTGCGATGCAGTACCTGTGGGAGACGGGAATGTTCAGGTGGTGCGATGGAGACATGTACAATGTCACACCTCTACACCTGGCTGCTGATGCTGGCAACACCGAGGTGATCCGCTACCTGCTCCGAAACAAGaggtgtATGGTAGAGACTGTGGATGAGGATGGGTTGACAGCGGTCCATGTGGCATCAGAGAGAGGCTGTATAGAGATGTGTTGGACGCTACTACAGAGATCAGGCTTCAGGATACTACACTTGAAGACCTACAGCGGACACACGCCACTGGACCTCTGCAGGCAGGGAAGGACATTCAGACATCTGCAGCTGGCCAAACTACTGACCCGCTACATGAAGGAGCCACCCTTCAGCAAACCTGAAGAGTCACCAATCCTGTACTACTGGACATTATTCTTCCCGTGTCTGATCGGAGGAGTGATTCTGATTATCGCAGCGATGTTGGGGGGCTACGGAGGGATAACGTGCGCCGTCCTCTTCCCTTGGCTGGCCAGGAGTATTTTCTCCCAGTTACACCGCATGACCACCTACCAGAGGTTGGCCAACCCCGTCTACCTAGGGACTATGATAGCTGGACTGTTCCACTCTCTAGTCTGTTTCTACTACAAAATACTGCCGCCTAGCTTGTGGGGGGATAGTGTTCTGGGTCATGTGTCGCTGGTCCAGTTCTCTATGGTTTTGGCCATGTTCTGGAAGATTCTAACCCAGGATCCTGGGGAGCTGGGACCGGGAGATGCAGATCCTCGCTTCTCCTCCATAGCAGACCTGCTGGAGAAAAAACAGAATCCTCAGAGGTTCTGCATCTACTGTGAGGTAAGGATTCGCTGGGTAATACTTATGGATCGTTCTGAAAGGGACCTCCTTTGACCTTGTTAACAAGCAAGTATGTGTGGTAATAACCAGACTTTTTTTCCCAACAGATAATGTATTCCATTAACTTGTGACATAAGGGATGGATACAATATCCCTTTGAAATAAAGCACGAATAGATCTGTTGTTCTGAGGGAGCAAGGAGAGAAACATATTTTCCCTATTGGAGAGTCAACTGGATTAAGCAAGGGTAGGTCAGGAAGGTGAGGTCTGGTTACACCTCTAAATAACATGAGAGTTCCAGATGGAATAGCATCAAAGACTATGGCGAACTCTCTAGGTGTTACAGGGATATTGTAAcgagataaaaaaaaatcctcataatTGAGTAACAATCTTTCTGCATTAAAAAGTTGACTCACCAGCAGGATATGATTATTGAACCAGTTGTTAAAAAAGAAAGACTTTCTATACAAAATGTCCTTACTGTTCCAAATGAAATACCTGAGGGGAAAAATTATGTTTATATATTAACGACCACGCTACGAATACTTGTCTATGAAAAGCAGATCATTTTGCAGGAATCTTATCAATGTTATAGTTACAAAGTAACAAAATTGAAGCCACCAAAACAGGAGAAGAAATAATGAGGGATGAAATTCCAAATTGAAGTAGGATTCTTTACAATtaatcttaaaagtattattcaaAGTAGGAAAATCTACAAAATTGTGTCCACCATATTCATGAGTTCATAACGACAAATTGCCTAATATAATGTGTACGATTTTTCCAGGTGAAGTTGAAAACATCTGGTCAACCGCTTTACCTTTTTTGTTGTCAAGATATAGGGACTCCTTCCTTCTTAGCCCTCCAAGTGTATACTCCTCAGGCGTCATGAGACGTCAACAGAAATATCCACTTCATTTGAAGGCTGAGGTGTTAGGGTGTGTCTAAGTGTTTGGACCGTAACCATCATTTTTTTGGATTCCGTTCCGACCagaaaaataaagttctgaatcGGTTCTAACCAAAACATAGTAATGGTTTATATAGTttctttctgttcctttttaaacctcaaaacTATATTTTTGTACATTTAGCTAGACATTAAATTACTTAACCAATGGATAGAACAGCTTGCTATGTAGCTACATGCGTTGGACAACAAGTGTAGGGTGTGCGAGATGCAACTGAAATTTTGCAGAGCGCGCTGGGCATCTTGTTGTTATGACATACAATATCTGAACAAGGCCCATGGAATTATACACATACGGTGGAGTGGCTTCTATGAAGGAActtttgaatgtctttgaacttcagcGAGTTGGTTTCACTAACGTTGGACTTAGAGAATTACCTTTCCGTAGTTAATAAATCCATTGTGAAACGTGATAACTGTGGTATCTGTAACTAGCATTGAAAAGTAAATCCATTCTAATAAAAAAATCTCCCTAATTTTTGAATCATGCTTGTAACGTCAGTAGCTGCCGTAGACTATGCTTCCGAGGGAGGGGAGAGGCAGATGGCCTACACACTGATAAAAACTtccagctggcaggcagacactggaatacgtTTGAGTGACAGCAAGGGCTTTGCATAGACTCCTTGTTGCGtttttttgtgggactggaaAAAATAATGCCCAGAACgttaaccggttcccatgcttttaaaataactgTTCTGTTATGGAATAGTATAGATCACTTTCGCTCTGGTTCTGTTCCTCAAATGTAGTTATTTTACGGTTTTCAGTTATTTCAGGTAttttccctgaaccggttccaacccctgcttAAAACAGTTGTGTTTATGATATGATTTATAGAAGTGCATAGATGCGATAAACAAGTCAATCGAACATAACCATGGAATTGCCATGGAAACATGCAAAATTTGCCTACATTTAGGGGTATTTCACTCTGTTGAGGCACAAATTGGagtataatgcttgtatggatgtcaaccccaacacAAGTTTACGTACTTCcggcgccaacagagatggccgcctcgcttcgcgttcctaggaaactatgcagttttttgtttttttacgtgttatttcttacattagtaccccaggtcatcttaggtttcattaca
>XM_021606417.2
CGGGGTCTGTCCTGCCAACTGCAGTCTAATCTAACGTGAACGTAGCATGCGTGACTGCAGACAGTTTAAAGACAACCACAAAAAAATCAAAATCCTTGATAGACAAGGGTCTTTACTAAATGAACGTATGATTGTTGTTACAATGTATCGTCTCTGTAAAGATGTGTTGTTTACATTGACAGAGTGATAGTCAGGCGTCACATTATTCGCATTATGCATCCGATGCCTAGGATCGACGGGGACATTTTTGACTGTATCCAACGAGGGAACATTGATCAGTGTGCACATTTCATTGAACATGATCGATCTATCCTCAAAGAGAAAGGCTGGGGTGGTTTCACTCCTCTCCACTTTGCGGCCCTCCAAGGTAACCGTTGGATAGTTAACCTGTTGCTAAGCAATGGAGCTGACCCCAACCTGACCTGTGATGCAGGAATGACGGCCTTCCATTTAGCCTGCAGGCATGGTAATGTATATGTGATGCACCAGATTATGCAGCATGGAGCTGATCTACGCATAGTAGACCATCAGGGAAAAACCGCCCTACACCATGGAGTGTCTGGAGGCAAcatTGTTGCGATGCAGTACCTGTGGGAGACGGGAATGTTCAGGTGGTGCGATGGAGACATGTACAATGTCACACCTCTACACCTGGCTGCTGATGCTGGCAACACCGAGGTGATCCGCTACCTGCTCCGAAACAAGaggtgtATGGTAGAGACTGTGGATGAGGATGGGTTGACAGCGGTCCATGTGGCATCAGAGAGAGGCTGTATAGAGATGTGTTGGACGCTACTACAGAGATCAGGCTTCAGGATACTACACTTGAAGACCTACAGCGGACACACGCCACTGGACCTCTGCAGGCAGGGAAGGACATTCAGACATCTGCAGCTGGCCAAACTACTGACCCGCTACATGAAGGAGCCACCCTTCAGCAAACCTGAAGAGTCACCAATCCTGTACTACTGGACATTATTCTTCCCGTGTCTGATCGGAGGAGTGATTCTGATTATCGCAGCGATGTTGGGGGGCTACGGAGGGATAACGTGCGCCGTCCTCTTCCCTTGGCTGGCCAGGAGTATTTTCTCCCAGTTACACCGCATGACCACCTACCAGAGGTTGGCCAACCCCGTCTACCTAGGGACTATGATAGCTGGACTGTTCCACTCTCTAGTCTGTTTCTACTACAAAATACTGCCGCCTAGCTTGTGGGGGGATAGTGTTCTGGGTCATGTGTCGCTGGTCCAGTTCTCTATGGTTTTGGCCATGTTCTGGAAGATTCTAACCCAGGATCCTGGGGAGCTGGGACCGGGAGATGCAGATCCTCGCTTCTCCTCCATAGCAGACCTGCTGGAGAAAAAACAGAATCCTCAGAGGTTCTGCATCTACTGTGAGttGTTCCAGCCGGACCATACTAAACACTGCAaattgtgtgatgtgtgtgtgagggattACGACCACCACTGCCTGTTCCTGAACCGCTGCATTGGTAGGGGAAACCACCGCCTCttcatcatcttcatcctctCCATGGCCGCAGCACACCTCCTTTTTGTGGCTGCGGCAATTTACCACCTGTATGTGGTGGTGGTGTCCCTTGAGGACCAGTCGTTGGTTAGGGCAGTAGCTAAACAGTTCTGGGTGGTCACATTGACAATAATGAACGCTCTGACAATCCTTTGGGAGGCTTGGCTGTTGACAGAACAGTTTGATGCCATCGCCATGGGGACTACAACCTACTTCAAACCTACCTGCGAGACTCGGCAACGGTCACTAGGACACCGCTGGACAACGGTTCTTACCTTCCTattggaggggaggagacggTTAGATTATGGACAGACGGAGGACAATATCTCCATAGACATTTAGACAATATGCACTCTAAAACCTGTGGTATAATGAAGAACAATGTATATATGAATTCTATATTCCATTCTTGAAACCAACTGGATCATCTGTGAGACTGTTAGCATGGTGAGCTAGAGTCTAGGCATTACCTTGGGAAGCTAATACCGCTATTAAACATATAACAAGTGGTGTGTAGACCAGAATTGGTTCTAATAGATCTTAACATTAGAGATTCCTTAGATTGTCTTTGGGGGTGTGGTCGTCAATATATCTGTTTAAACTTTATACTTGAACATAGGTATTGAAAAATTATACTTTTAAcatatagtagtagtagacagtagACTGAATGCGGAAATCTTGCCAGCTAACATGTCACACTCCTCACATAACGCACTGACTTAACACTATGTCCTGGTTAAGCATTTCCTatgtatacagtacatgtagaGCTAGTTTTATGTGATGCTCTGAGCTATTTTAAAGCTGACAGTACTTCTACAACAATGTAGCTAGTTTATGAACAACTGATCTTGCGCTGTCCTGTGAAGGATCCCACTATTTTACTACAGTATATCCCGTGGAGTTAGctttctgttttacatttttaatgcaTTGGTGTATTTAAAACAGTGTTTCGTGGGAGATAACTGGTCACTTGAAACGTGACCGGTTTCTTTTTACTTAAATAAAAAGTAATATGATGATGTGA
>XM_021606427.2
CGGGGTCTGTCCTGCCAACTGCAGTCTAATCTAACGTGAACGTAGCATGCGTGACTGCAGACAGTTTAAAGACAACCACAAAAAAATCAAAATCCTTGATAGACAAGGGTCTTTACTAAATGAACGTATGATTGTTGTTACAATGTATCGTCTCTGTAAAGATGTGTTGTTTACATTGACAGAGTGATAGTCAGGCGTCACATTATTCGCATTATGCATCCGATGCCTAGGATCGACGGGGACATTTTTGACTGTATCCAACGAGGGAACATTGATCAGTGTGCACATTTCATTGAACATGATCGATCTATCCTCAAAGAGAAAGGCTGGGGTGGTTTCACTCCTCTCCACTTTGCGGCCCTCCAAGGTAACCGTTGGATAGTTAACCTGTTGCTAAGCAATGGAGCTGACCCCAACCTGACCTGTGATGCAGGAATGACGGCCTTCCATTTAGCCTGCAGGCATGGTAATGTATATGTGATGCACCAGATTATGCAGCATGGAGCTGATCTACGCATAGTAGACCATCAGGGAAAAACCGCCCTACACCATGGAGTGTCTGGAGGCAAcatTGTTGCGATGCAGTACCTGTGGGAGACGGGAATGTTCAGGTGGTGCGATGGAGACATGTACAATGTCACACCTCTACACCTGGCTGCTGATGCTGGCAACACCGAGGTGATCCGCTACCTGCTCCGAAACAAGaggtgtATGGTAGAGACTGTGGATGAGGATGGGTTGACAGCGGTCCATGTGGCATCAGAGAGAGGCTGTATAGAGATGTGTTGGACGCTACTACAGAGATCAGGCTTCAGGATACTACACTTGAAGACCTACAGCGGACACACGCCACTGGACCTCTGCAGGCAGGGAAGGACATTCAGACATCTGCAGCTGGCCAAACTACTGACCCGCTACATGAAGGAGCCACCCTTCAGCAAACCTGAAGAGTCACCAACGATGTTGGGGGGCTACGGAGGGATAACGTGCGCCGTCCTCTTCCCTTGGCTGGCCAGGAGTATTTTCTCCCAGTTACACCGCATGACCACCTACCAGAGGTTGGCCAACCCCGTCTACCTAGGGACTATGATAGCTGGACTGTTCCACTCTCTAGTCTGTTTCTACTACAAAATACTGCCGCCTAGCTTGTGGGGGGATAGTGTTCTGGGTCATGTGTCGCTGGTCCAGTTCTCTATGGTTTTGGCCATGTTCTGGAAGATTCTAACCCAGGATCCTGGGGAGCTGGGACCGGGAGATGCAGATCCTCGCTTCTCCTCCATAGCAGACCTGCTGGAGAAAAAACAGAATCCTCAGAGGTTCTGCATCTACTGTGAGttGTTCCAGCCGGACCATACTAAACACTGCAaattgtgtgatgtgtgtgtgagggattACGACCACCACTGCCTGTTCCTGAACCGCTGCATTGGTAGGGGAAACCACCGCCTCttcatcatcttcatcctctCCATGGCCGCAGCACACCTCCTTTTTGTGGCTGCGGCAATTTACCACCTGTATGTGGTGGTGGTGTCCCTTGAGGACCAGTCGTTGGTTAGGGCAGTAGCTAAACAGTTCTGGGTGGTCACATTGACAATAATGAACGCTCTGACAATCCTTTGGGAGGCTTGGCTGTTGACAGAACAGTTTGATGCCATCGCCATGGGGACTACAACCTACTTCAAACCTACCTGCGAGACTCGGCAACGGTCACTAGGACACCGCTGGACAACGGTTCTTACCTTCCTattggaggggaggagacggTTAGATTATGGACAGACGGAGGACAATATCTCCATAGACATTTAGACAATATGCACTCTAAAACCTGTGGTATAATGAAGAACAATGTATATATGAATTCTATATTCCATTCTTGAAACCAACTGGATCATCTGTGAGACTGTTAGCATGGTGAGCTAGAGTCTAGGCATTACCTTGGGAAGCTAATACCGCTATTAAACATATAACAAGTGGTGTGTAGACCAGAATTGGTTCTAATAGATCTTAACATTAGAGATTCCTTAGATTGTCTTTGGGGGTGTGGTCGTCAATATATCTGTTTAAACTTTATACTTGAACATAGGTATTGAAAAATTATACTTTTAAcatatagtagtagtagacagtagACTGAATGCGGAAATCTTGCCAGCTAACATGTCACACTCCTCACATAACGCACTGACTTAACACTATGTCCTGGTTAAGCATTTCCTatgtatacagtacatgtagaGCTAGTTTTATGTGATGCTCTGAGCTATTTTAAAGCTGACAGTACTTCTACAACAATGTAGCTAGTTTATGAACAACTGATCTTGCGCTGTCCTGTGAAGGATCCCACTATTTTACTACAGTATATCCCGTGGAGTTAGctttctgttttacatttttaatgcaTTGGTGTATTTAAAACAGTGTTTCGTGGGAGATAACTGGTCACTTGAAACGTGACCGGTTTCTTTTTACTTAAATAAAAAGTAATATGATGATGTGA

Function

NR:

description
probable protein S-acyltransferase 23 isoform X2

GO: NA

KEGG:

id description
K20027 ZDHHC1_11; palmitoyltransferase ZDHHC1/11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981213.1 False 3513 mRNA 0.43 10 59969512 59988857
XM_021606417.2 False 2566 mRNA 0.46 10 59969515 59993651
XM_021606427.2 True 2503 mRNA 0.46 10 59969515 59993651

Neighbor

gene id symbol gene type direction distance location
lrrc18a LOC106576925 coding upstream 42374 59922675 ~ 59927138 (+)
drgx LOC106576867 coding upstream 175749 59786129 ~ 59793763 (+)
ercc6 ercc6 coding upstream 190775 59725618 ~ 59778737 (+)
cxcl12a cxcl12a coding upstream 341258 59589595 ~ 59631391 (+)
LOC110525860 NA coding upstream 361093 59599905 ~ 59608419 (+)
LOC110525930 LOC106576864 coding downstream 5759 59999410 ~ 60018695 (+)
LOC110526033 LOC106576855 coding downstream 189564 60183215 ~ 60218672 (+)
LOC118966766 NA coding downstream 223470 60217121 ~ 60217262 (+)
LOC110526041 LOC106576856 coding downstream 235820 60229471 ~ 60264209 (+)
LOC110526060 zdhhc16 coding downstream 307842 60301493 ~ 60370189 (+)
G66187 NA non-coding upstream 30700 59938558 ~ 59938812 (+)
G66145 NA non-coding upstream 61523 59907712 ~ 59907989 (+)
G66142 NA non-coding upstream 61811 59907120 ~ 59907701 (+)
G66121 NA non-coding upstream 77646 59891511 ~ 59891866 (+)
G66214 NA non-coding downstream 26826 60020477 ~ 60020701 (+)
G66225 NA non-coding downstream 33586 60027237 ~ 60091030 (+)
G66269 LOC106576859 non-coding downstream 136668 60130319 ~ 60141209 (+)
G66308 NA non-coding downstream 182327 60175978 ~ 60176307 (+)
G66310 NA non-coding downstream 186245 60179896 ~ 60180249 (+)
G66188 NA other upstream 27448 59941486 ~ 59942064 (+)
G65442 NA other upstream 644383 59324636 ~ 59325129 (+)
G64338 NA other upstream 1269133 58699296 ~ 58700379 (+)
G64315 NA other upstream 1303606 58665334 ~ 58665906 (+)
G64292 NA other upstream 1381927 58586858 ~ 58587585 (+)
G67806 LOC106581772 other downstream 1321223 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 1736114 61729765 ~ 61733388 (+)
G70011 NA other downstream 3281312 63274963 ~ 63275296 (+)
LOC110526969 stk32c other downstream 4815938 64809255 ~ 64946164 (+)
LOC110527164 LOC106576754 other downstream 5922084 65915581 ~ 65922285 (+)

Expression


Co-expression Network