LOC110526075


Basic Information

Item Value
gene id LOC110526075
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 60305769 ~ 60308241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981519.1
gttgattcttcacaaaaaaatatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtacttacccATTGAGCATAACATAGTTCATTGAGAAGATATAGTCACCATCTTATCAGGATCTATGTACTTAACTGTTGTTACCTGCAGCCTAGATACTGTAACAAAGAGTCAGGTGCCACAAGTTGTTCCACAAGTTGTGTCTGAATGTAGGGGAGGTATGGCAGACCCTTTCTATACTTAATGGAAGTGCATTTCATTTTCTGACAAGAGAACACCAAACAACACTGGCTTTGCGAGTTTCACTTCATATTCCTTCAGGTGAGCAACACGTTGTTGATTTCCTTATGAGCTTGTGCAAGTTGCCGAGTCTTTTCACAACTTTTTAGATTTAATGACAGTCAGCCTATCTGTTTCTTTTTTCAGAGTTTATTGGAAATGGGAGCCAGTTACAGTGTTGACTTGTGAAAGTTATTTTCATATACCTTTTTAATGTGAGTACTTTTCACCTCTTTGTTTTGTATTTGCTGTTAATTTCAGCAGAGTGAGATCCCTGTATGGACAAAGACAACCCTGACCTGCCTCTGAGGTCAGGGGACCTTCTACCATTCTCTCCACACCCACCTGTCTCTTAGAACATGAACTCTCACTACTTTTACACATACACATCACCTCGACCTGCATCTACACACCACTTTTACAGATCGATGTGTCCCACCGTCATCACCCCACCTATGCAGTGGCCCAACAACTACAGTCTCTACCCTCCATGTATCCCCACCAAGTATCAATTCCCCTTAAACTTGGTCTCCAGGAGCACTAGGGGATTCCAGGGATCTGATCCCAGCGCGTTCCACCACTATCATCAAACTTCTCCCCTGCCCTGGTGCAACTATAGACTTGTGTCTAACCCTTACTGGCACTACCACCAGCGCCTGTATGCCAATCTTTCTGCTCCAGTGGCTCCTGTGGCCCCTACTCCAACCAGGCCCCAGAGGTTCCAGAACCAGGGAGGGACCTGGCCCGAGGGCTTCACCCTGAGAGGAGAGCTTCGCTGGGGCAGGCTGGAGAGGGTGTATGGCCCCCGCAGGGAGCTGCCTGAGTTTGTGAGGCAGGACCTGCGGAGAGTGTACGGTACCTATCCCCGGACGGATGTTAGTATCACCTACCAGGGAGGGGAGTACGTGGTGCGAGGGGACACCCATGTCGGGGAACAGGAGtacagagtggagaggaggatagTGAGGCAGCAGGAGAGTCCTGAGGGGGAAAGCATGAGTGAGGtagtagagaagaggaggagaaagatgaGATGATTGTAATGGAGGTATGGCTAATAAATGCCAACTTTGTTGACATatgaaaatgtatttacataAATGTGATGATTTTTCCCATAAGCATTGAACAAAAGTATAACTGTTATATAGTAGTCGCTGCATATTAGTAAATGTTAATAGTAGAAATGCTATTGATAAATATTCtacataaaattgtatttgtcacatgctgaatacaacaggtttagtagaccttactatgaaatgcttacttacaagcccttaaccaacaatgcagttttaagaaaatacaacaaCAGCAAAAAGTAAGAGATgagaaacaaataattaaagcgcAAACTCCAGATAAGTAGCATTTGACTGCTTTTGTATTAAACGTATTTGTTAATATTCTCCATCTCATTATATGGCGCTACCTCAGGCAACTACAATGCTGGAGTCATTCTGGTCTAGTGTTTTCATTAGGTGGTGTGCTACTGTGTAATACTATGATTTTCAGTATCAAGGTTCCTGTAACATTAGCATTAACAAGTTTGCTTCAGGAAAGTGCTTTCCCACTCTTGTTATAAACTCCTGTCATTTGCCTCTCATCTCTTACTGAAAAACCCATGTTAAGCAGTTAAAACTTCTCTCATAACATGCTGATGTTCTATCCATTGTCTATCATATTAGTCATTTCTCACCTCTTATACTATAACCCCGTGTCGTATTGTATCAAACCCGGTCCAATCTCTTGTATCTCATCACTATTGTCACAGTAGACTTTGTCCATcagcatagaaatataattactagaatggACATTCTCATTCAAGTCAACTGGTAACTCTGACAAGTATGACTAGTcattctgtttctgtctgtccgaCCAGTCATTGACGTTTATGGACCCTGCTcttctctctgtcgtctccgtgACTCCAGGTTCTATGGAACAGGCGTTTGGGTCTGAGTCACCTCTCGCAGTATAGAGTGATAAGACATAGCTGTGGCCAGGGTGTGTGGGTTGGGTATGCTGCATTCGATTGCTTCACTTTTGAATGTTCCTTGTACTGCACAATTTCCAGTAATATAGATGTGCTTGAGCACACATCCCGTTTCTCTATAAATAAGTGTCACATATGATTTTACAAAACATGGATGTCTGACTGTTATTTA

Function

NR:

description
uncharacterized protein LOC110526075

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981519.1 True 2473 mRNA 0.43 1 60305769 60308241

Neighbor

gene id symbol gene type direction distance location
LOC110526041 LOC106576856 coding upstream 41560 60229471 ~ 60264209 (+)
LOC110526033 LOC106576855 coding upstream 87097 60183215 ~ 60218672 (+)
LOC118966766 NA coding upstream 88507 60217121 ~ 60217262 (+)
LOC110525930 LOC106576864 coding upstream 287074 59999410 ~ 60018695 (+)
si:ch211-223a10.1 LOC106576865 coding upstream 312118 59969512 ~ 59993651 (+)
LOC110521558 LOC106576852 coding downstream 65811 60374052 ~ 60391626 (+)
rrp12 rrp12 coding downstream 94840 60403081 ~ 60427711 (+)
prdm8 LOC106576848 coding downstream 188729 60496970 ~ 60501618 (+)
LOC110526122 LOC106576844 coding downstream 809009 61117250 ~ 61227125 (+)
LOC110526134 NA coding downstream 821865 61091580 ~ 61132005 (+)
G66310 NA non-coding upstream 125520 60179896 ~ 60180249 (+)
G66308 NA non-coding upstream 129462 60175978 ~ 60176307 (+)
G66269 LOC106576859 non-coding upstream 164560 60130319 ~ 60141209 (+)
G66225 NA non-coding upstream 214739 60027237 ~ 60091030 (+)
G66214 NA non-coding upstream 285068 60020477 ~ 60020701 (+)
G66370 NA non-coding downstream 3265 60311506 ~ 60312165 (+)
G66372 NA non-coding downstream 8064 60316305 ~ 60316536 (+)
G66375 NA non-coding downstream 12352 60320593 ~ 60320833 (+)
G66435 NA non-coding downstream 186492 60494733 ~ 60495095 (+)
G66475 NA non-coding downstream 197341 60505582 ~ 60505809 (+)
G66188 NA other upstream 363705 59941486 ~ 59942064 (+)
G65442 NA other upstream 980640 59324636 ~ 59325129 (+)
G64338 NA other upstream 1605390 58699296 ~ 58700379 (+)
G64315 NA other upstream 1639863 58665334 ~ 58665906 (+)
G64292 NA other upstream 1718184 58586858 ~ 58587585 (+)
G67806 LOC106581772 other downstream 1006633 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 1421524 61729765 ~ 61733388 (+)
G70011 NA other downstream 2966722 63274963 ~ 63275296 (+)
LOC110526969 stk32c other downstream 4501348 64809255 ~ 64946164 (+)
LOC110527164 LOC106576754 other downstream 5607494 65915581 ~ 65922285 (+)

Expression


Co-expression Network