LOC110526097 (LOC106576849)


Basic Information

Item Value
gene id LOC110526097
gene name LOC106576849
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 60430184 ~ 60495300 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606720.2
GAAAGAGGCACTTTCTTGTGCATAGTGAAATGTGAGTTGTTTCCTATATCTTTGTTGCCTATTTAACTTCCCAACCTATTATAGGGCTATCGGGATATTCATTATGATGATTTTTATCCCGGAAATGGGAAGTATTCTGGCTGATTGGTGCCTGTCTAAGAAATCTTGAGCTGAGTCCTGTCCTCCACAACACCACCAGGAGCTGCTTGAGGCGAGAAATCCGGAGTGAAGAGGGACTTGGGACTGACGGCTGTTTATCGCGTCACCGTGGACTACCGATCAAATGACCACCATATCGAAATTTGCGCACCGTTACATTGTCCTGGAGTGAATCATTATCATCAAGACTATAATGTGAGAGACATTTCGGACTCGGTGATGTTTTGAGGTGTTAGTCTACACAGCTGTCCGGGAAAGATGGCGAGAGCTGCCATTAGCGTGTCTATAGCCGTGGTGTTTTTGGGATTAGCGATTTTTACTGTCAAACTTCCCTCCGTAAAAGGAGAGATGCAAGAAGAACAGCAGGAGGAGAGGTCCTGTCAAGGTGCCTTCGATTTATACTTTGTCCTCGACAAATCTGGCAGTGTCAAACACCACTGGATAGAGATCTACTCCTTCGTGGAGCAGCTGGCTGAGAAGTTCCTCAGCCCCATGTTACGGATGTCCTTCATCGTCTTCTCCACTAGAGGAACCACCATCATGAAACTGACAGAGAGCAGGGAGTCCATTAACAGAGGTCTAACCACGCTGAGGAGGGAGGCGCCAGGAGGAGACACCTTCATGAACCTTGGCCTGGAGAAGGCCAACGAACAGATACACTATGAGAACCATGGGACAGCCAGTGTGATCATTGCACTGACTGATGGAGAACTGAATGAGTGGCAGTTTGCTACTGCACAACGAGAGGCGCAGAGGGCACGGTCGCTTGGAGCCATAGTTTACTGTGTGGGCGTCAAAGAGTTTAATGAGACGCAGcTGGCTACCATAGCAGACACCCTGGAGCATGTGTTCCCTGTCTGGGGGGGTTTCCAAGCCCTCAGGGGCATCATCAACTCGATCATTAAGAAGTCCTGCATTGAGATTCTAGCTGCTGAaccgtccagtgtgtgtgcaggagaGTCGTTTCAGGTGGTAGTTCGAGGGAACGGTTTTCTCCACGCCAGAAACACCGACCAGGTCCTCTGTAGCTTCAAACTcaacgacacacacactcaggatGAGAGGCCTGCTGGTGTAGAGGAAACTttcctgctctgtcctgctcctgTTATAAAGGAAGTAGGAAGggtgaTCTATCTACAGGTCAGTATGAATGAAGGACTCTCCTACATCACCAGTTCTGTTCACATCACCACCATCGAATGTTTTGATGGGACCCTCCTGCTGATCTCATTGCTAGTTCTGACACTTTTGTTGGGCTTGCTGTTCATGTGGTGGTTCTGGCCCCTCTGCTGCACCTTGGTCATTAAAGAGcccccaccacctcctcccccagAGCCAGAGTCTGATGATGAAGATGGTATGCCCAAAATGCGATGGCCCACAGTGGATGCATCCTACTacggagggagaggggtggggggcatCAAACGCATGGAGgtgcgttGGGGGGATAAAGGCTCTACAGAGGAAGGGGCTAAGCTAGACAAGCCTAAGAATGCAGTGGTGAAGATGCCTGAACAGGAGTATGAAGCGTACCAACCCAAACCACGCACACCCAAGCCCTGGAAACCTCCTCAGGACAGAAGGTGGTACACacctatacagGGGAAGTTGGATGCTCTGCGGGCTCTGTGTCGTCGAGGATATGATCAGGTGTCCCTGATGAGACCTCAGCCTGGAGACAAGGGTCGTTGTATCAACTTCACACGCGTAAAAAACAAGGAGTCCATTCGACCCCCTTCTGCCCGTCGCTCTCAAACCCTTCCCCCTCCTCCAGTTCAGAGGCCTCTAGTCCAAccgccctctcctcccccacactccactcctccctccgtctccatccctccctcccgtgCCCCCCCGTCCAGCCGACTTCCCCCAGGCCCCCCTCCAGCCCGTGCACCCCCAGGCCCCCCTCCCTCTCGCCCGCCACCCAGGCCTTGAGGACAAGACAAACCCCTATTACGCCCTCACAGTAGTAACACCCCCCAAAAACACTCTCCTCACACCACCAAGAGCAAAGGTATTTATTTAATACACGGGTTCAGGCTTTGATCTCAAAGGTTTGTTGCTGGACAGCAAATATCATATTTTGGTGAATACCAAATCAACTACTGAGTTCACAGTAAATGCCTCTGGTCTTTAGGAGGTGCAGACAAATTCTGTTTCCTCAAATTGTGTTGTCTTATGAACAGAAATCCAATTGTAATGGTATTGAATCGTACATGGATTGAATCGTAAATAGGTCAACTCGGCCACAGAGGGATATTGTGAACCTTGACATTGGAAGTTTACAATATCCCTCTGCTGGCCGAGTTGACATATTTAAAGAAATGCCATTGGTTGGTGGAGAAAAAGTTGAATATCTTTGATAGGCTGATGAGGAATTAAATGTAACCTCAAACTTAAACTTTATAATGTTTGTCTGGAGGCCAGGCTAAAGGTCCCTCACTAGAGACTAAAATGATAATCTGCTTTGTGTTCATCTGTTAACAGTGAAAAACATTTTTGTCCATCATTAAAGCATTTTCTTTCCAA
>TU74240
GCTAAGCTAGACAAGCCTAAGAATGCAGTGGTGAAGATGCCTGAACAGGAGTATGAAGCGTACCAACCCAAACCACGCACACCCAAGCCCTGGAAACCTCCTCAGGACAGAAGGTGGTACACacctatacagGGGAAGTTGGATGCTCTGCGGGCTCTGTGTCGTCGAGGATATGATCAGGTGTCCCTGATGAGACCTCAGCCTGGAGACAAGGGTCGTTGTATCAACTTCACACGCGTAAAAAACAAGGAGTCCATTCGACCCCCTTCTGCCCGTCGCTCTCAAACCCTTCCCCCTCCTCCAGTTCAGAGGCCTCTAGTCCAAccgccctctcctcccccacactccactcctccctccgtctccatccctccctcccgtgCCCCCCCGTCCAGCCGACTTCCCCCAGGCCCCCCTCCAGCCCGTGCACCCCCAGGCCCCCCTCCCTCTCGCCCGCCACCCAGGCCTTGAGGACAAGACAAACCCCTATTACGCCCTCACAGTAGTAACACCCCCCAAAAACACTCTCCTCACACCACCAAGAGCAAAGGTATTTATTTAATACACGGGTTCAGGCTTTGATCTCAAAGGTTTGTTGCTGGACAGCAAATATCATATTTTGGTGAATACCAAATCAACTACTGAGTTCACAGTAAATGCCTCTGGTCTTTAGGAGGTGCAGACAAATTCTGTTTCCTCAAATTGTGTTGTCTTATGAACAGAAATCCAATTGTAATGGTATTGAATCGTACATGGATTGAATCGTAAATAGGTCAACTCGGCCACAGAGGGATATTGTGAACCTTGACATTGGAAGTTTACAATATCCCTCTGCTGGCCGAGTTGACATATTTAAAGAAATGCCATTGGTTGGTGGAGAAAAAGTTGAATATCTTTGATAGGCTGATGAGGAATTAAATGTAACCTCAAACTTAAACTTTATAATGTTTGTCTGGAGGCCAGGCTAAAGGTCCCTCACTAGAGACTAAAATGATAATCTGCTTTGTGTTCATCTGTTAACAGTGAAAAACATTTTTGTCCA

Function

NR:

description
anthrax toxin receptor 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606720.2 False 2700 mRNA 0.49 18 60430184 60495300
TU74240 True 1042 TUCP 0.49 3 60430207 60461234

Neighbor

gene id symbol gene type direction distance location
LOC110526081 NA coding downstream 80875 60342589 ~ 60349309 (-)
LOC110532500 NA coding downstream 93963 60334984 ~ 60336221 (-)
LOC110526047 LOC106576854 coding downstream 128871 60281672 ~ 60301313 (-)
LOC110525977 LOC106576859 coding downstream 257642 60130315 ~ 60172542 (-)
LOC110525964 LOC106576862 coding downstream 306042 60089990 ~ 60124142 (-)
gdf10a LOC106576847 coding upstream 30119 60525419 ~ 60538921 (-)
LOC110519525 LOC106576846 coding upstream 165167 60660467 ~ 60695525 (-)
LOC110532522 LOC106576846 coding upstream 199835 60695135 ~ 60707046 (-)
LOC118964986 LOC106576846 coding upstream 220644 60715944 ~ 60717300 (-)
abcc2 mrp2 coding upstream 750976 61246276 ~ 61311977 (-)
G67056 rrp12 non-coding downstream 8636 60417294 ~ 60421548 (-)
G67011 NA non-coding downstream 58803 60369797 ~ 60371381 (-)
G66969 NA non-coding downstream 113944 60316038 ~ 60316240 (-)
G66966 NA non-coding downstream 117128 60312810 ~ 60313056 (-)
G66967 NA non-coding downstream 121281 60308645 ~ 60308903 (-)
G67094 NA non-coding upstream 1779 60497079 ~ 60497308 (-)
G67095 NA non-coding upstream 3193 60498493 ~ 60498701 (-)
G67096 LOC106576848 non-coding upstream 3811 60499111 ~ 60499334 (-)
G67099 NA non-coding upstream 10539 60505839 ~ 60506099 (-)
G67023 NA non-coding upstream 26513 60521813 ~ 60522228 (-)
LOC110525695 LOC106576879 other downstream 1275039 59144373 ~ 59199471 (-)
G65147 NA other downstream 1644567 58784742 ~ 58785617 (-)
G63328 NA other downstream 3031696 57397194 ~ 57398488 (-)
G63093 NA other downstream 3367336 57035667 ~ 57062848 (-)
G61978 NA other downstream 3896209 56524970 ~ 56533975 (-)
G68736 NA other upstream 1186978 61682278 ~ 61686308 (-)
LOC110526417 LOC106576819 other upstream 1486431 61981652 ~ 61983330 (-)
G69210 NA other upstream 1916222 62411522 ~ 62418296 (-)
G70013 NA other upstream 2781908 63277208 ~ 63277752 (-)
LOC110526867 LOC100136521 other upstream 3874602 64369803 ~ 64384521 (-)

Expression


Co-expression Network