gdf10a (LOC106576847)


Basic Information

Item Value
gene id gdf10a
gene name LOC106576847
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 60525419 ~ 60538921 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981581.1
ACTACTCCAGTGTTACCCCTCTAACCTCTGGCTGTAAAGGAGAAACAAGTGTTAAAGTAGCTCTGAGGagagttaactaacctccagCATCCACACGGCATAAAAGAGGAGTAAAAGCGGACGCCTTTATTACAGACACCATCATTACAAGTCATTCCTCGGATGTGCGTTTTCTCCCTTGAAGTAAAGGATTTTGTGTTTGGTTCTGAAATGGCAGTCTGGTTCGAGTTTACCGCGCACATGCTTTTTCTAATGCTAGGTTGTTGTCTTGGAACTTTGGAGGGTCGGACCTCGAGCCGAACCCCATGGGGCTTGCAGGGACAGGGCAGCGATGGAACCGATTCTCCGTTTGACCGAGACAGAGCTAATCAGGATGTGGTCTCACAGCACATGTACAGGCTGTATGAGAAATACAACAGAGATCTGAAACGACTCAGAGAGGGAAACACTGTCAGGAGTTTCAGAGCCAGCCAAGACTCGTCTGACCAGAGGACGATTTACCATCTGAACCTGACGTCTCTCCAGAACTCAGAGCTCATCCTCTCTGCCACGTTTCACTTCTTGTTCGACCGGTGCCCACGGCCAAGGGCCTGGTTGGGCAAACGCTACAAAATCCCGGCCTGTCGCTCTCTACACCTCCACCCTGCTCCCTACATCCACCTCTTCCTTCACTCCAACCCCTCTGGGTCAGGGTTCAATCCAGGGTCGCAGGTGTCATTGCTAGGCAACATGACATTTCACCCTAACCAGAAAGGGTTGTGGCAGATGCAGGACGTGACTGTGGCGATAAAAGAGGCCAGGGAAAAGGGCAGTCATTTTGTGTCGGTGGAGCTGGACTTTGGGCTGCAGTACCACAGACAGCCAGAGGACACACTGTCGGGGACAAGTCTACCTTATTTATTGATGTATGCTGATGACCATGCGCTAGATGAGCCCAACAGTGTGGCACAGACTTTACAGAGGTATGGCCCTGAGGCTGAGGTGAAGGAAAATTATTCTCACCCTTCTCGTCTTCCCCCTAAACAGGGGTCAAAGGGTCGTGTAAGAAGGGGGGTACCATCCCACCCAGACTCCATCCAGAACAACGAGCTACCAGAGGTGGAGTACAGGCCTAGCGGATCCAGGAAAGATGACCTGTTTGAAACCGCCTACCACACCCTGAAACCTATCAATCCCAAGcctgggaggaaggagaggatgaggaatggccaggatggagaggaagaagtgaaagatggagagagggatagagggagtcaATCGCCAGTTCTGAGCTTGGACGAGAGGACCCCAAAGAAGAGCAGCGATAGAGGGAGTAGGTTGCAAGACAACATTGAGGGAAGGAGTGATGAAAGAAACGATAGAGGGAAGGCAGGAGGAAGTAAGTCTCCAATGCTGAGTTTTGATGAGTGGACAATGCGCAAGGCGAAGAAGAGACAGTGGGGATCGGAACCCCAGATTAGGAGCTGCTCTAGGAGGACACTCAGGGTCGACTTTGCCGACATCGGCTGGAGTGAGTGGGTCCTGGCGCCTGAAGCCTTCGATACCTTTTACTGCGCTGGAACCTGTGGATTCCCCATGCCCAAGgTGCTGTATCCCTCTAACCATGCAACCATCCAGAGTATAGTCCGTGCGGTTGGGATAGTTCCAGGGGTCCCAGAGCCCTGCTGTGCCCCAGAGAAGATGAGCCCTCTGGTGGTTCTCTACCAGGACGAGGGAGGTAACCTGGTGCTCAAGGTCTACCCCAGCATGTCTGTGGAGAGCTGTGCCTGCAGATAGACCCAAAGGACAGAGGGGAACAATGTTGGACAAGACAGGATGGAATGGCAGGGATTTAAAaggaaaaaggaagaaaaaaaagggGAAGGAAAAAAAGACACAAGATATATTCATAAATGGACGGATGAGTTGAGGTGTCTGTCCATCTCTTCGTCCCTTGTTGTCCCTCAGGCGTTTGACGCTAAGATAGGTGAACGCAAAGAAGAGTTGAAGAGGCACGTTATCTGTCGTTGCAGCACCAGTCATGTCCTCCAGTAGCAGTAGACACACGCCACCACAATATTCTCCACATCTACCATACCCTCGACAAAGCAGCATCACCACTTCAAGGACTACAGGTACTGAGAGAGCTCTCTCCCTCCAAACAACTTTAATTAAAATTGTTACGTTCAAAAACCAGGGCTGCTTGACTGGCGCTGTGTTTATTTTTAGTTGTTTAGGCACTGATCATGCTTACTTTAATATACCCATTTCAGACAGAAGATGGGGCATGTgacctgtaaaaaaaaataccctgagtgtacaaaacagctTCCTAATACTGAGTAGCTCACCCCCTCCTCTTttccatcagaacagcctcaattcctcGTGGCATGGACTCTAGgagtcaaaagcgttccacagggatgctggcccatgttgactccaatggttcccacagttgtttcaagttggctggtggatcattcttgatacagacaggaaactgtcgagcgtgaaaaacccagcagcgtttcagttcttgacacaaagcggtgtctggcacctactaccataacccgttcaacagcacttaaatatttagtcttgccTAGGTCAAGTTAAGGTGACCATATTACTGCAACCGTGGCGGCACATCAtgacggcagtcaaattccacgtttagtcacggtaattaggcctACCAAACTAGTATCCTACCAAACTTGTCTTATcattctgacatcaatgcaattgTTATTGAAAATCAGGAGTATAACCTACCTGGCTGGTATGAAAATGAAACACAGGAAAAGCATCCTAAATtctctatttaagtgcatagatgacatgtaattttttcccctgcccctgtttccagacaggtgcatgataatggtctattctaaatcaaaacaaatttcacacatatattatttagtatatgtaaagacaagatcaAATCAATAATAGTCTGaatagcctatcacttgtgaatgatgcccagcctgtgtgcagtaaggcaagaaacagcgGGGGTTTTTTGCGATTTTTAAAATTCATAGTCTCACACCTCatgtatgttttgataaggtttgtatcacaactaaagtaacttcttaaaattaagcacattaatccgcttcaCACCGGGTGTA

Function

NR:

description
PREDICTED: growth/differentiation factor 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981581.1 True 3140 mRNA 0.48 3 60525419 60538921

Neighbor

gene id symbol gene type direction distance location
LOC110526097 LOC106576849 coding downstream 30119 60430184 ~ 60495300 (-)
LOC110526081 NA coding downstream 176110 60342589 ~ 60349309 (-)
LOC110532500 NA coding downstream 189198 60334984 ~ 60336221 (-)
LOC110526047 LOC106576854 coding downstream 224106 60281672 ~ 60301313 (-)
LOC110525977 LOC106576859 coding downstream 352877 60130315 ~ 60172542 (-)
LOC110519525 LOC106576846 coding upstream 121546 60660467 ~ 60695525 (-)
LOC110532522 LOC106576846 coding upstream 156214 60695135 ~ 60707046 (-)
LOC118964986 LOC106576846 coding upstream 177023 60715944 ~ 60717300 (-)
abcc2 mrp2 coding upstream 707355 61246276 ~ 61311977 (-)
mlh1 mlh1 coding upstream 864109 61403030 ~ 61418074 (-)
G67023 NA non-coding downstream 3191 60521813 ~ 60522228 (-)
G67099 NA non-coding downstream 19320 60505839 ~ 60506099 (-)
G67096 LOC106576848 non-coding downstream 26085 60499111 ~ 60499334 (-)
G67095 NA non-coding downstream 26718 60498493 ~ 60498701 (-)
G67094 NA non-coding downstream 28111 60497079 ~ 60497308 (-)
G67446 NA non-coding upstream 469546 61008467 ~ 61008711 (-)
G67459 NA non-coding upstream 481254 61020175 ~ 61020408 (-)
G67464 NA non-coding upstream 483400 61022321 ~ 61022524 (-)
G67641 NA non-coding upstream 484839 61023760 ~ 61216832 (-)
G67703 NA non-coding upstream 611557 61150478 ~ 61187828 (-)
LOC110525695 LOC106576879 other downstream 1370274 59144373 ~ 59199471 (-)
G65147 NA other downstream 1739802 58784742 ~ 58785617 (-)
G63328 NA other downstream 3126931 57397194 ~ 57398488 (-)
G63093 NA other downstream 3462571 57035667 ~ 57062848 (-)
G68736 NA other upstream 1143357 61682278 ~ 61686308 (-)
LOC110526417 LOC106576819 other upstream 1442810 61981652 ~ 61983330 (-)
G69210 NA other upstream 1872601 62411522 ~ 62418296 (-)
G70013 NA other upstream 2738287 63277208 ~ 63277752 (-)
LOC110526867 LOC100136521 other upstream 3830981 64369803 ~ 64384521 (-)

Expression


Co-expression Network