LOC110532522 (LOC106576846)


Basic Information

Item Value
gene id LOC110532522
gene name LOC106576846
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 60695135 ~ 60707046 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989748.1
AGACTTCTCTGGCCACCAGTACCAtgagtctgatgttggagagggGCATTGGGTGCCAGACCACCCTGAGTGGAACAGAATTCCAACCAGccatggaggagctggaggaagcACTGGCTCTGTCCAACCTGGCCACACCTAAACATGGCAAGAGACTCCACATCCCTGTGGTCCGGATCCTGGATGCTCAGgaGGTGCGTTccaggtctccctctctctgcagtctgaGAGCCAGGGAACAGCTTGTGGTGGAGCTGAAGAAGGCCAACGGCAGCCTGGGTATAAGTGTAGCTGGTGGAATGAACACCTGTGTTCGTTACGAGGGGATATACATCAAGAGTCTGGTGCCAGGGGCCGCTGCTGAGCAGGACGGGCGCATTCAGATAGGTGACCGACTGCTGGAAGTTGATGGGTCCAACCTACGAGGTGTAACACACAAACAGGCCGTGGAGTGCCTGAAGAAGACTGGAGAGgtggtGAGTCTGCTTTTAGAGAGGGAGCCCCAGGTGGTGTTGGGGGCGGGAGCGAATCGCCCCCGCTCAGCTTCACAGAGCCAATCAGGAAGTCTCAGGAGAGACAGCTCCATGGAGATGACCTTGAGTGGCAAGACCAAGGACTACAGCTTTGTCactgatgACAACACTCTGGAGGTGCTGTTGAAGAAGAGCCTGTGTGGTTTGGGCTTCAGCTTCTACATCAGTGAGTTGAACAGTGGTTGTGACCAGGGCAGCAGTGTGGTGCGGATCAAAACCCTTTTCCAGGGTCAACCAGCCAAGGAGTCAGGACAGATCAGAGAAGGAGACGTCATATTGGCTGTTAATGGACAATGGGTTAAAGGCCTCAGCTACCAGATATGA

Function

NR:

description
tyrosine-protein phosphatase non-receptor type 13-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989748.1 True 857 mRNA 0.55 7 60695135 60707046

Neighbor

gene id symbol gene type direction distance location
gdf10a LOC106576847 coding downstream 156214 60525419 ~ 60538921 (-)
LOC110526097 LOC106576849 coding downstream 199835 60430184 ~ 60495300 (-)
LOC110526081 NA coding downstream 345826 60342589 ~ 60349309 (-)
LOC110532500 NA coding downstream 358914 60334984 ~ 60336221 (-)
LOC110526047 LOC106576854 coding downstream 393822 60281672 ~ 60301313 (-)
LOC118964986 LOC106576846 coding upstream 8898 60715944 ~ 60717300 (-)
abcc2 mrp2 coding upstream 539230 61246276 ~ 61311977 (-)
mlh1 mlh1 coding upstream 695984 61403030 ~ 61418074 (-)
LOC110526202 LOC106576840 coding upstream 711333 61418379 ~ 61429118 (-)
LOC110526243 LOC106576835 coding upstream 834638 61541684 ~ 61544247 (-)
G67023 NA non-coding downstream 172907 60521813 ~ 60522228 (-)
G67099 NA non-coding downstream 189036 60505839 ~ 60506099 (-)
G67096 LOC106576848 non-coding downstream 195801 60499111 ~ 60499334 (-)
G67095 NA non-coding downstream 196434 60498493 ~ 60498701 (-)
G67094 NA non-coding downstream 197827 60497079 ~ 60497308 (-)
G67446 NA non-coding upstream 301421 61008467 ~ 61008711 (-)
G67459 NA non-coding upstream 313129 61020175 ~ 61020408 (-)
G67464 NA non-coding upstream 315275 61022321 ~ 61022524 (-)
G67641 NA non-coding upstream 316714 61023760 ~ 61216832 (-)
G67703 NA non-coding upstream 443432 61150478 ~ 61187828 (-)
LOC110525695 LOC106576879 other downstream 1539990 59144373 ~ 59199471 (-)
G65147 NA other downstream 1909518 58784742 ~ 58785617 (-)
G63328 NA other downstream 3296647 57397194 ~ 57398488 (-)
G63093 NA other downstream 3632287 57035667 ~ 57062848 (-)
G68736 NA other upstream 975232 61682278 ~ 61686308 (-)
LOC110526417 LOC106576819 other upstream 1274685 61981652 ~ 61983330 (-)
G69210 NA other upstream 1704476 62411522 ~ 62418296 (-)
G70013 NA other upstream 2570162 63277208 ~ 63277752 (-)
LOC110526867 LOC100136521 other upstream 3662856 64369803 ~ 64384521 (-)

Expression


Co-expression Network