dnajc12 (djc12)


Basic Information

Item Value
gene id dnajc12
gene name djc12
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 61544678 ~ 61548916 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036938063.1
TGCTTGTGAccaagtagttgaacatgttattactccaacgtCGTGAAAGTCACAAACAgacacgttttcattttcgtGAAAAATAACTTTATATCGAAGGAGTGCGGTTTGAGTTAACGGCATTCACATGCGCAGTTCGGCGCAAGAGCCGTTTCTGCGCATGCACGTAGCTAGCCAATGTGACACCTACAAGTGTGATCGGGGAGAAGCAATTTTAGCTTATCTTCATACTGTACCTACTGTCTGTCATCTTTGGTTGCGGCGGGAGCGACACTTCAGCACATCGATgacgtcaacaacaacaaaatgtatcGTACAGAACAGATTGCCAATGAATACAGAGTAAGGGCCTTGGCATGCCATCCAGACAAGCACCCTGATAATCCAAGAGCAGtgGAAGAGTTTCAGAAGTTGCAGGAAGCCAAGGAGGTTTTGTGCCATGAAAAGAGCAGAAGAAACTATGATGTATGGAAAAGAAGTGGAATTACCATACCATTCCATGGCTGGCTAGCCCTTGGCGACTCTGTCAAAACTTCAATGCATTGGGCTGTGAGGACCAAAAAGGAGCCCATGCTGGAGAGCTCTAAAGTAACATTCCCTAACAGTTCCCAAGACAGAGACTGTACTGACCACGAGTCACCAGAGATGCCTTCCCCAGATGCAGTGCCATCTTCAAGTGACTACTGCCATCGCCATTTTCGCTGGGCTTCCGACTCTCCATCCAGTCTTCTGCGGAAATTCAGAAATTATGAAATCTAAATGGAAAGATAAAATTATCAGCCCTGTCTATTTCCTTGTGAATAATGTTGCTTGTTGGTTCCCACACTCACATTAATTGTATGGAATTGCTAAACTAATTGTCTTTTATCTATCAGGTGTAACTTATTAGACCCTCTATAGAAAATGTATACTGAAAATACCCTAGTTTTGCCATGGCCTAGGCTCTAGGGTATGGGGCATATATATTATTTGTGTACGGTCTATGGCATGGAGCCTGGAATGGACCTATTTAGCTCTTTATCAAAATGTCCCAATAGATGTCATTATGTGAAGTATAATATTTTTGTAGTGTTGTATCCTTGTACATGGTTGCCTTTTTAAAATTATGTAAATGCTCTGGATGGTATTTTCACATCTAATAAATGTTATGTATTCAATATGC
>NM_001160542.1
GGCGGGAGCGACACTTCAGCACATCGATgacgtcaacaacaacaaaatgtatcGTGTGCGTATTTATGTTTAGCTGTGAAATGGTCATTGATTGATATTAAATCAGCAAATTGCGCATTTTAAATCAACTAAAGCTATTAGCGTTAGCTGGATAATATTGCAATATTCAGTGACATATCGTGGTTCTTCTCCGGTTCTTTAGACTTCTAGCTGTGCCGCGCCGTTAAAATAAAGTCGACCTGGAACGCGCAACACCGCAGCCATCAGACCAGTCAGGCTAGCTAAATCAGTTATTTTCAAAGCTTATATAGCTAATATAAATCAGAATGGATGATATTTTAAATTGCAAACCAGAGGACTTGGACGATTATTACGGGTTACTCGGATGCGATGAGTTATCTTCGACAGAACAGATTGCCAATGAATACAGAGTAAGGGCCTTGGCATGCCATCCAGACAAGCACCCTGATAATCCAAGAGCAGtgGAAGAGTTTCAGAAGTTGCAGGAAGCCAAGGAGGTTTTGTGCCATGAAAAGAGCAGAAGAAACTATGATGTATGGAAAAGAAGTGGAATTACCATACCATTCCATGGCTGGCTAGCCCTTGGCGACTCTGTCAAAACTTCAATGCATTGGGCTGTGAGGACCAAAAAGGAGCCCATGCTGGAGAGCTCTAAAGTAACATTCCCTAACAGTTCCCAAGACAGAGACTGTACTGACCACGAGTCACCAGAGATGCCTTCCCCAGATGCAGTGCCATCTTCAAGTGACTACTGCCATCGCCATTTTCGCTGGGCTTCCGACTCTCCATCCAGTCTTCTGCGGAAATTCAGAAATTATGAAATCTAAATGGAAAGATAAAATTATCAGCCCTGTCTATTTCCTTGTGAATAATGTTGCTTGTTGGTTCCCACACTCACATTAATTGTATGGAATTGCTAAACTAATTGTCTTTTATCTATCAGGTGTAACTTATTAGACCCTCTATAGAAAATGTATACTGAAAATACCCTAGTTTTGCCATGGCCTAGGCTCTAGGGTATGGGGCATATATATTATTTGTGTACGGTCTATGGCATGGAGCCTGGAATGGACCTATTTAGCTCTTTATCAAAATGTCCCAATAGATGTCATTATGTGAAGTATAATATTTTTGTAGTGTTGTATCCTTGTACATGGTTGCCTTTTTAAAATTATGTAAATGCTCTGGATGGTATTTTCACATCTAATAAATGTTATGTATTC

Function

NR:

description
dnaJ homolog subfamily C member 12

GO: NA

KEGG:

id description
K09532 DNAJC12; DnaJ homolog subfamily C member 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036938063.1 False 1162 mRNA 0.42 5 61544678 61548916
NM_001160542.1 True 1244 mRNA 0.41 5 61544685 61548656

Neighbor

gene id symbol gene type direction distance location
LOC110526243 LOC106576835 coding downstream 431 61541684 ~ 61544247 (-)
LOC110526202 LOC106576840 coding downstream 115560 61418379 ~ 61429118 (-)
mlh1 mlh1 coding downstream 126604 61403030 ~ 61418074 (-)
abcc2 mrp2 coding downstream 232701 61246276 ~ 61311977 (-)
LOC118964986 LOC106576846 coding downstream 827378 60715944 ~ 60717300 (-)
tial1 tial1 coding upstream 103392 61652308 ~ 61676942 (-)
LOC110526339 mcmbp coding upstream 168538 61717454 ~ 61733606 (-)
csgalnact2 cgat2 coding upstream 197887 61746803 ~ 61755455 (-)
ret LOC106576823 coding upstream 209454 61758370 ~ 61789952 (-)
si:dkey-192p21.6 LOC106576822 coding upstream 248150 61797066 ~ 61840583 (-)
G68713 NA non-coding downstream 34960 61509003 ~ 61509718 (-)
G68705 NA non-coding downstream 44632 61499805 ~ 61500046 (-)
G68704 NA non-coding downstream 45229 61499231 ~ 61499449 (-)
G68703 NA non-coding downstream 45694 61498674 ~ 61498984 (-)
G68701 NA non-coding downstream 48087 61496261 ~ 61496591 (-)
G68742 LOC106576834 non-coding upstream 13009 61561925 ~ 61562283 (-)
G68744 NA non-coding upstream 15797 61564713 ~ 61564933 (-)
G68745 NA non-coding upstream 16317 61565233 ~ 61565457 (-)
G68746 NA non-coding upstream 16566 61565482 ~ 61565739 (-)
G68747 NA non-coding upstream 17637 61566553 ~ 61566831 (-)
LOC110526097 LOC106576849 other downstream 1083444 60430184 ~ 60495300 (-)
LOC110525695 LOC106576879 other downstream 2389533 59144373 ~ 59199471 (-)
G65147 NA other downstream 2759061 58784742 ~ 58785617 (-)
G63328 NA other downstream 4146190 57397194 ~ 57398488 (-)
G63093 NA other downstream 4481830 57035667 ~ 57062848 (-)
G68736 NA other upstream 133362 61682278 ~ 61686308 (-)
LOC110526417 LOC106576819 other upstream 432815 61981652 ~ 61983330 (-)
G69210 NA other upstream 862606 62411522 ~ 62418296 (-)
G70013 NA other upstream 1728292 63277208 ~ 63277752 (-)
LOC110526867 LOC100136521 other upstream 2820986 64369803 ~ 64384521 (-)

Expression


Co-expression Network