LOC110526424 (LOC106576817)


Basic Information

Item Value
gene id LOC110526424
gene name LOC106576817
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 62006400 ~ 62027537 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981964.1
CTTATCGCAGGGGCAGGTCTCACATGTCACATCTGTTTTAAAGGAAGTGACAGAGTGTCACCCAATAAGCAGGAAACAAACTGTTTCTATTACTATGACAGTGCAGGGGAGTTATTTGGCGAAAGCTGTTCATGAGAAGAGTCTAAATTCTGTGGGGTAGAAAGAAAGGCTTTAACTCCAAAAAGTAAGACGAGCCTTTCAAAAAAGGGCAGATGCTTTGTGCTGTGGGGTGAGTTGATGCAACCGTTCTCAAACGTCACAATTATGGATGGAGTTGTCTCACCCTCAGAATCAGCAATGTCTGGATTCCACTACATGTGTGAGCTGTTGATTGTCCATTCTAGCGAGGCTCAGGAATGGGCTACATATCTGCAGAAGATCTTGAAGTCGTCACGCAAGTTTCCCAAAAGGTCTATCGTATTGTATGCAGTTGACAGTGCTGACCAGCTACATGGATGCGAACTCAACATTTTCTATAATAGTAAATGCATCGTGCTGCTGCTGACAACAGCAATCCTGGACATTCTAAATGACCCTGAAGTCCTGGGAACTTTTCAGAGACTCCTTCATCCTCCACACAGAGTGGTGGCGCTGTTGTGTGGGATGTCGGGCGATGACGTGCCCACTGAATGGTTTGAAAACTGGCAGAGCTGGAGAAAACTGTATGCTGAAGACGAACCTGCTCTTTACATCTCCACCATTCTAGAATCTATCGCTGACTGTAATACAGAAGAGGCTGAACATGAGGCGGAAGCTACAGCAAAAACAGAAGCAAAAACAGAGCGCGAAATCCCTGTGGTTATGAACCCCAAAgctgaggggacagaggaagagtcAGTGACAGAACCAGAGTGTGTCCAGGACGACAATGACGATGTGAGAACAGAGATCCACCAAAACCAGGAAATGAGCCCCACACAACCCACCTGCCTCACTGTTCAACCAAACAGAGTTTTATGCGGGGACCATGCAACTATTTTTATAATCTTTTCTAATAAACTGGACAACCAGTTGAAAATGGAGGTGGTGTTTGCCTCTGAAGATTCAACTGCAAAACGGGTTCTAGGGATTTTGGAGAATGCATACACTATCAGTATTAATGCGCCTGATATGCCAGCAGGAGAGGTGTCACTCACTCTGTATAGCAACGACTCACCAGTCTGTTTGATGCCTGTAACATACTACACAGCCATGGGAGAAATCAGCCGTTATCTTGAACATGCAGCTGCTCCCCTGAACTTTATGTGTCAGGCATTCAATTTAACATCCAATACCACAGAGTCACTTGACAATTTGCTGACAGACTCATTACAATGCAGGATCCCTGCAAGTGGACTTCATGTGTTTGGAATCAGACAGCTAGAGGAAGACAATATGGCTGCATATCAGCGAAAGGAGGAGCTTCCCACTCTGCTTCATTTTGCAGCAAAGTACGGGCTGAAGAAGCTGACAACAGTCCTGCTACAGTGTCCAGGTGCCTTACAGGCCTACAGCGTGATGAATAAGAATGGAGATTACCCAAATACACTGGCAGAGAGGAGTGGCTTCTCTGAACTGAGACAGTTCATAGATTACTTTGTGGAGACAGCTGGCACGGCGGAAGAAGATGAGGAGGTGTACGAGTCCAACTCTTCTCAAGACATCATGAACGACTCCCTAAACCCTGGGTGTCAAGAAGACATCTACGAGACCATGTCCAACTCTTCTCAAGACATCATTAACGACTCCCTAAACCCTGGGTGCCAAGAAGACATCTATGAGACCATGACCGAGTTAAACCATGACTCCGGGGAAGACCTATATGAGGACATGGAGAAGGCATTAGGAGAGTCTCATAACCCGGAGGAAGTCATACTTAGAACATTTTTTCAAGGTAAACCTGATGCAGGTGTGCCCCAAGTTGGGGAGGATACAACTGATGAAGAGGTGGGAGACCAGGTGGAAGAACCAGAGGGGTTTGAGGACGAAGAACTTTACAACATGTGTGTTTCTGATCAAATCTATGACACGTTGGACGAGAGTGCAAGCTATCTCCCGGAAATTGTCAACCGTCCACCAGCCCCCATTCCAAGACCTGTAACATTTTCAGAGCCTGAGGAGTCCAAGACGTACATTTCAAGAGTGTTTTCAGCAAAAGAAGAATCAAGTCCACAGACGGACCTCAGAGAAACAGAGTCGTCCACTGTGAGGCCTGTGAGAGATGgagcctccacctcctcttcccacGACCCCTATGCTGAGGTGAAGACCCAAGGCCAGAGGCAGCTCATTGCCTTGCAGGAGAAGGTGAAGGTGGGGGTCCTGAGTGTGGATGATGCTGTCAAGGAATTCAAGGCCTGGCAGTTTGATCAGGATAGGAGATCTCAGTCTCTGCGTAATCAACAGGAAAATTTGAAGAGATTACGAGGCAGCATCACCAGACGccacaaagagagggagaagattgGGAAGGAGATCGGTCTGGAGATAACCGCCCCACTACAGAGGAACCTTCCCTGGGGCGCCAACATGGCTGTGGAGTGTTCTGTGTACGAGCCCACCCCACGGGTCATTGCCCAACCCCCTCCTGTGATCCGGTCAAGCCAGAGAGACACCTGGAAGACTGGCAGTACCTCCAGCACATCCAGTACTGGCAGTAACAGACTCAGCACACATAGTACGATTAGCTACAGCAGCGGAACTGAGCCTGACTTTGAGGACACAGCAGACttcctccctctacccccactCCCTCTACCCCCACGGCCCGCTGAGGCCgcacctctacctcctccccccAGAATCCCACCACGACTCCCAGACCGGGCTGTTGAGAGTTTGCTGGAGGAGCGTTACGTGGCATACCCCTCCCGAGCTCTCCCTCAGAGACCACCTCAGAGGAACAACTCTCCCCCTCTCATACCCCGGAGAACACGATGACACACAGTTCTGCTGTCATAACATTTCAAATGACTGCCCTCTAAAATATCTGTCAGGAACAAATCAGGCAGTGTTACTtacagtattcaaaccccttgacttattccacatgttgttgtgttcccGCCTGAattcaactttttttttaaccatctacatacaataccccataatgacaaagcgaaaacatgtttttggaaatgttttgaaagggaaatacagaaatatctcatttacataagtagtcacacccccgagtcaatactttgtag

Function

NR:

description
phosphoinositide 3-kinase adapter protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981964.1 True 3191 mRNA 0.48 17 62006400 62027537
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110526377 LOC106576818 coding downstream 1783 61920972 ~ 62004617 (-)
LOC110526417 LOC106576819 coding downstream 23070 61981652 ~ 61983330 (-)
pdlim1 pdli1 coding downstream 89821 61902276 ~ 61916579 (-)
sgpl1 LOC106576820 coding downstream 120298 61852311 ~ 61886102 (-)
si:dkey-192p21.6 LOC106576822 coding downstream 165817 61797066 ~ 61840583 (-)
LOC110526449 LOC106576814 coding upstream 282946 62310483 ~ 62315483 (-)
LOC110526460 eif3a coding upstream 295896 62323433 ~ 62351491 (-)
LOC110526498 NA coding upstream 339702 62367239 ~ 62375476 (-)
LOC110526503 LOC106576812 coding upstream 362756 62390293 ~ 62403103 (-)
LOC110526516 LOC106576811 coding upstream 378971 62406508 ~ 62421062 (-)
G68965 NA non-coding downstream 25487 61980609 ~ 61980913 (-)
G68962 NA non-coding downstream 34483 61971519 ~ 61971917 (-)
G68910 NA non-coding downstream 70002 61935513 ~ 61936398 (-)
G68949 NA non-coding downstream 100506 61905474 ~ 61905894 (-)
G69071 NA non-coding upstream 143413 62170950 ~ 62173859 (-)
G69149 NA non-coding upstream 377016 62404553 ~ 62405932 (-)
LOC110526526 LOC106576810 non-coding upstream 394373 62421910 ~ 62436080 (-)
G69215 NA non-coding upstream 408649 62436186 ~ 62436564 (-)
G68736 NA other downstream 320092 61682278 ~ 61686308 (-)
LOC110526097 LOC106576849 other downstream 1545166 60430184 ~ 60495300 (-)
LOC110525695 LOC106576879 other downstream 2851255 59144373 ~ 59199471 (-)
G65147 NA other downstream 3220783 58784742 ~ 58785617 (-)
G69210 NA other upstream 383985 62411522 ~ 62418296 (-)
G70013 NA other upstream 1249671 63277208 ~ 63277752 (-)
LOC110526867 LOC100136521 other upstream 2342365 64369803 ~ 64384521 (-)
tjap1 tjap1 other upstream 4791307 66806836 ~ 66883731 (-)
LOC110527436 ppp2r5d other upstream 4967145 66965664 ~ 67010646 (-)

Expression

LOC110526424(LOC106576817) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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LOC110526424(LOC106576817) Expression in each Bioproject

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LOC110526424(LOC106576817) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network