Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110526701 |
| gene name | LOC106576791 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 63225088 ~ 63239237 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| coiled-coil and C2 domain-containing protein 2A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036982496.1 | False | 3524 | mRNA | 0.47 | 22 | 63225088 | 63239237 |
| XM_036982500.1 | False | 3383 | mRNA | 0.47 | 21 | 63225088 | 63239237 |
| XM_036982510.1 | False | 3108 | mRNA | 0.48 | 18 | 63226984 | 63239237 |
| XM_036982519.1 | True | 3400 | mRNA | 0.47 | 17 | 63227131 | 63239237 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526678 | LOC106576796 | coding | upstream | 79544 | 63075377 ~ 63145544 (+) |
| ide | LOC106576795 | coding | upstream | 194467 | 62983943 ~ 63030621 (+) |
| LOC110526643 | LOC106576799 | coding | upstream | 277016 | 62923989 ~ 62948072 (+) |
| LOC110526628 | LOC106576800 | coding | upstream | 350433 | 62864201 ~ 62874655 (+) |
| cyp1b1 | cyp1b1 | coding | upstream | 485096 | 62735771 ~ 62739992 (+) |
| LOC110526727 | LOC106576790 | coding | downstream | 44090 | 63283327 ~ 63292127 (+) |
| LOC110526770 | LOC106576788 | coding | downstream | 84665 | 63323902 ~ 63499450 (+) |
| LOC110526778 | LOC106576786 | coding | downstream | 326266 | 63565503 ~ 63598806 (+) |
| LOC110526795 | NA | coding | downstream | 381000 | 63620237 ~ 63621429 (+) |
| LOC118965254 | NA | coding | downstream | 741896 | 63980371 ~ 63998531 (+) |
| G69829 | LOC106576794 | non-coding | upstream | 4116 | 63220026 ~ 63220972 (+) |
| G69745 | NA | non-coding | upstream | 143202 | 63081685 ~ 63081886 (+) |
| G69743 | NA | non-coding | upstream | 148754 | 63076115 ~ 63076334 (+) |
| G69705 | NA | non-coding | upstream | 170089 | 63033351 ~ 63054999 (+) |
| G69692 | NA | non-coding | upstream | 241367 | 62983502 ~ 62983721 (+) |
| G69835 | NA | non-coding | downstream | 9730 | 63248967 ~ 63249306 (+) |
| G70003 | NA | non-coding | downstream | 28908 | 63268145 ~ 63268349 (+) |
| G70006 | NA | non-coding | downstream | 31671 | 63270908 ~ 63271209 (+) |
| G70008 | NA | non-coding | downstream | 32607 | 63271844 ~ 63272163 (+) |
| G70012 | NA | non-coding | downstream | 38132 | 63277369 ~ 63277799 (+) |
| G67930 | mcmbp | other | upstream | 1491700 | 61729765 ~ 61733388 (+) |
| G67806 | LOC106581772 | other | upstream | 1909836 | 61314874 ~ 61315252 (+) |
| G66188 | NA | other | upstream | 3283024 | 59941486 ~ 59942064 (+) |
| G65442 | NA | other | upstream | 3899959 | 59324636 ~ 59325129 (+) |
| G64338 | NA | other | upstream | 4524709 | 58699296 ~ 58700379 (+) |
| G70011 | NA | other | downstream | 35726 | 63274963 ~ 63275296 (+) |
| LOC110526969 | stk32c | other | downstream | 1570352 | 64809255 ~ 64946164 (+) |
| LOC110527164 | LOC106576754 | other | downstream | 2676498 | 65915581 ~ 65922285 (+) |
| G73515 | NA | other | downstream | 3048442 | 66287679 ~ 66288469 (+) |
| LOC118965274 | LOC106576739 | other | downstream | 3181258 | 66417495 ~ 66424081 (+) |
