LOC110526969 (stk32c)


Basic Information

Item Value
gene id LOC110526969
gene name stk32c
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 64809255 ~ 64946164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608144.2
GCTGCAGAGAGGCTGGGTTCTTCACATGCATGACAGTGAGACTCAAACGTCGACTAGAGAACTGTCACACACGGCTCCGCGAACATAAGTCAGTTGAGGACGGGAAGAGAAAAATAGGAAAGCCGattgtttatatttttaaaaCAGTATTGAGGCTCACTATCCGATCTAATCTATCGTCTTTGTTGTTTTAGTGAGGCAAAGTCGCAGTGCGTAAATGagataaaaaacaaacattttttttaagaaTCAATAACAGGAGGGAGCGATGCATTTGTTCAACGTGTCCAACACACagctgtagtttttttttttttttttaacgagCGAGGAATGCTATCTGAGCTCGCGCATCAATGTTTCACTGGGGCAAGTGGAAGAAGAGGATGGGCGCGAATAGTTCTTCTAAGAGACCGGTCTACGATGAAAAGGAAGATGTAACCTTTGACCACTTCCAGATTCTCCGGGCCATTGGGAAGGGAAGCTTCGGAAAGGTGTGCATTGTGCAGAAGAGGGACACAGAGAAGATGTACGCCATGAAGTACATGAACAAACAGCAGTGCATAGAGAGAGACGAGGTCCGAAACGTCTTTAGAGAGCTAGAGATCCTACAGGaaattgaacatgtttttttAGTAAACCTCTGGTACTCGTTCCAGGATGAGGAGGACATGTTCATGGTGGTGGATCTGCTGCTGGGAGGGGACCTGCGCTACCACCTCCAACAGAACGTCCATTTCAATGAGGACGCTGTCAAACTCTACCTGTGTGAGATGACCCTGGCACTGGACTACCTGCAGAGCCAGCACATCATCCACAGGGATATCAAACCAGACAACATCTTGTTAGATGAGCAAGGCCACGCCCACCTGACAGACTTCAACGTTGCTACAATAatcaaggatggagagagggccaCGGCCTTAGCTGGAACCAAGCCCTACATGGCCCCAGAGATCTTCCAGTCCTTTGTGAGCGGGGGGGTGGGTTATGCCTTTGAGGTGGATTGGTGGTCACTCGGCGTGACGGTTTTTGAGGTGCTGCGTGGATGGagGCCCTATGAGATCCATGCCAGTAACTCAGTGGAGTCTTTAATGCAGCTCTTcagtacagtcagtgtgcagtacaACTCCACCTGGCCCAAGGATCTGGTTCATCTCATGAGGAAGcTGCTGACGGTGAACCCAGAGCATCGTTTCTCCAGCCTGTCTCACATGCAGACAGCTCCCTACCTCTCTGACATCAACTGGGACGCTGTGTACGAGAAGAAGATAGAGGCTGGCTTTGTCCCTAACAAGGGCCGTCTGCATTGCGACCCCACCTTTGAGCTGGAGGAGATGATACTAGAATCTCGTCCCCTccacaagaagaagaagaggctGGCCAAAAACAGGTCACGGGAAGCCAGCAAGGATTCCCAGTCTGAGAACGACTACCTACAGGAGTGCCTTGAAGTCGTGCAGTCAGAGTTCATGATCTTCAACCGCGAGAAGTTGAAAAAGAGTCAGGAGGAGGGTGCAGAGGGAGGGGAGTGTGAAGGAGCTGCCGAGgggggtgatgatggtgatggagacGGATCCGGAGAGGCTGAGGGAGGCACAGAGGATGAGGATCCCGAACCCGAACCTGAGTCCTCCTCCAAACTGAGCATGTGCGGATCGGTCTGCTCCTCTCCTGGAAGCTCCTAGCACCGCACCGCCACCTGGTGGTCTCacaggctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaccatgcCTATAACCTCTCCTATGTAGCCATGATGACTGTGGGAACAGGGACGCACAGCAGGACACAAAACAATACACAGCAGGACACAAAATGGCTCCCCTATTTCGTCTTCTGTAGCATCCGTCGTTAAGGCATGAATGGGACTGCAGGTTCCAGAGCGGTCCTGCCCTCCGCGCCCCTAGAGTAAGCGCTAACTCTCTTCTATGCAACGTACAGTATAGCatgaaggtagggaggggatAGCAAGCAGCAGTAGCCGCAGACACAGTATATGAGCCTGATGACATACAGAGCAATAGGAGCCAGGTTTAAGAGTGTAAGATATTTTTTTAGCAGAGCCTCCCTGCTCTTTCAGCCTCGACTAGATGTAGCTCCCACTGCAAACTCACATGCTGAATTATTCAAATAGAGTTAGGCACTCTTTGTTTTCTTTGCCTGTGTAGCTCTTTCaatccctctcattctctctgtgcaCCCTATTCGGAACTACAATAGTACTGTTGGGTTACCTTCCCCAAATGCCTTTCATTTCAATGATAATATATAATTGTATCACAATGCCAATATACAGTGTAGTGCACATAGAAATAGgattactattatattattatgttcTATGTGATTCTATTTCTAAGGTAGTGCAGTGGATAGAGACTTTAAGAGGTTAATACTGTTTCCAGTCTCAGAGAGTGAGCCTTATTAGCAAATAATACTGTATGGGCCATTAAGGATAAGGAGTTTTTGCAAGTGTAAATAAATCACTAGTTCAATACTGTAAAACCACTTTAAATGGTGTTGATTGTTAATCAATAGCCATTCATCACACGTAATTATATCTACATTATGCATCAGCATGCCAGTTTGATTTTCCTACAGCGATTACGCTCCTCCACCAAAACATATTCCCCTACGGTGTTAGATTTCCAAAGGCCCTAAGTACAACTGCGGTGTAAATGGAAGGTTTCCCTCACCATCGATCTCTGTGACTGTTGCCAAGATGCTGTTCTTCTCACACTGTTCCATTGTGGGCTACATGCTCGTACTGCTTTAGTTCTTATCTGTTAAACACAAACCTTGTCACTAGCAGGGGATCAGTcgttctagtcattctatttctatggatcAGAAATGATCAACTTCTTTTGAATAGCTACAAAAGAATCCCGTAATTGATTATTATCCTTTAATAGACAACAATAGCTATAACCTAGTGGAATTTGACAATTGTCTCGATCATTTCATATCGAAAATTATCATTGGGCAGTGTTTTGAGTTGTGTAGTTGAAACTTTCACCTAGTAGAGACAGTGGTACATTTAAGGTGGTGCCATTTACTCTCAGCATGGGCATCTGGGAACATGTAGCATAGTCCGCCTTAAAACCCTAAGGCCTAACAAAGTAACACGTGTAAATAGACTAGCCTAACTCTCCACAGTTTTATGTGGGACTTCTTACTAAATTAACGTAAATGTTACTAAATTAAGAGTTGTAtgaagccaaaccttcatacatTGTTGTACTGATCTTATTTCCAAGTGTGCAGGCACAACTTGTAGGCACATATGCCAAAGCTTTTCTACCATTTGCATAGCCATTTCTTAGGAACTTTGAGTGTGTGAATGTATGTTTCCTCTCTGTTGTGCATAGAACCACTGTTCCTTCAGCAAGtgaaaatacaatcatttgtatACAACCATTTTATTGTGATTATAGATAAATGAATGTTTTTTGGGAGGAATTAAATAGTATTTAATTATATAATAAAAAATCAAGATGCCTCTTAAAGGTGAGGTGGGAAAAAAGTGCAGTTTTCCTATAAAAATAAGCGCATTAACTACAACGATAGTGTCTCGAACCCTGCATGTACCTCTATTCAAGGTTTTATTCTGATTTTGTAGGAGAGCCAAATGCTAGGGTTTTCATGGCTTACAGTATGTGCACATGCAAGCTTCggccatagagatggatagagatctTTACTTGGCAATAATCTGTTTTTTCATGGACATTGCTATTGAGGGCTTCCtcaattttaaagtagtcaactgggtggggattcctatgctTGG
>TU79281
TGCTATCTGAGCTCGCGCATCAATGTTTCACTGGGGCAAGTGGAAGAAGAGGATGGGCGCGAATAGTTCTTCTAAGAGACCGGTCTACGATGAAAAGGAAGATGTAACCTTTGACCACTTCCAGATTCTCCGGGCCATTGGGAAGGGAAGCTTCGGAAAGGTGTGCATTGTGCAGAAGAGGGACACAGAGAAGATGTACGCCATGAAGTACATGAACAAACAGCAGTGCATAGAGAGAGACGAG

Function

symbol description
stk32c Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation.

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608144.2 False 3827 mRNA 0.45 12 64809255 64946164
TU79281 True 244 TUCP 0.46 3 64809589 64901624

Neighbor

gene id symbol gene type direction distance location
LOC110526912 LOC106576775 coding upstream 25518 64773915 ~ 64783737 (+)
LOC110526877 LOC106576777 coding upstream 338171 64468523 ~ 64471084 (+)
LOC118965254 NA coding upstream 810954 63980371 ~ 63998531 (+)
LOC110526795 NA coding upstream 1187826 63620237 ~ 63621429 (+)
LOC110526778 LOC106576786 coding upstream 1210449 63565503 ~ 63598806 (+)
LOC110526991 LOC106576769 coding downstream 26230 64972394 ~ 64984304 (+)
LOC110532561 LOC106576767 coding downstream 46906 64993070 ~ 65016685 (+)
LOC110527002 rhoq coding downstream 75039 65021203 ~ 65041610 (+)
LOC110527013 socs5 coding downstream 121924 65068088 ~ 65120931 (+)
prop1 LOC100192335 coding downstream 215494 65161658 ~ 65167877 (+)
G71472 NA non-coding upstream 348886 64460165 ~ 64460369 (+)
G71468 NA non-coding upstream 350345 64458532 ~ 64458910 (+)
G71464 NA non-coding upstream 353122 64455663 ~ 64456133 (+)
G71456 NA non-coding upstream 361561 64447482 ~ 64447694 (+)
G71449 NA non-coding upstream 366785 64441931 ~ 64442470 (+)
G71654 NA non-coding downstream 41064 64987228 ~ 64991904 (+)
G71826 NA non-coding downstream 58121 65004285 ~ 65037581 (+)
G71935 NA non-coding downstream 248654 65194818 ~ 65256475 (+)
G71945 NA non-coding downstream 284000 65230164 ~ 65231403 (+)
G70011 NA other upstream 1533959 63274963 ~ 63275296 (+)
G67930 mcmbp other upstream 3075867 61729765 ~ 61733388 (+)
G67806 LOC106581772 other upstream 3494003 61314874 ~ 61315252 (+)
G66188 NA other upstream 4867191 59941486 ~ 59942064 (+)
G65442 NA other upstream 5484126 59324636 ~ 59325129 (+)
LOC110527164 LOC106576754 other downstream 969571 65915581 ~ 65922285 (+)
G73515 NA other downstream 1341515 66287679 ~ 66288469 (+)
LOC118965274 LOC106576739 other downstream 1474331 66417495 ~ 66424081 (+)
G74067 LOC106576735 other downstream 1810043 66756207 ~ 66758984 (+)
G74139 NA other downstream 1838171 66784335 ~ 66784969 (+)
G71779 NA non-coding downstream 4375 64905999 ~ 64932480 (+)
G71653 NA non-coding downstream 41710 64943334 ~ 64985289 (+)

Expression


Co-expression Network