Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110527164 |
| gene name | LOC106576754 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 65915581 ~ 65922285 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cytochrome c oxidase subunit 7A-related protein, mitochondrial-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021608309.2 | False | 1377 | mRNA | 0.43 | 3 | 65915581 | 65922285 |
| TU80728 | False | 1223 | TUCP | 0.44 | 3 | 65915735 | 65922285 |
| TU80729 | True | 1198 | TUCP | 0.44 | 4 | 65915735 | 65922285 |
65,914,000
65,915,000
65,916,000
65,917,000
65,918,000
65,919,000
65,920,000
65,921,000
65,922,000
65,923,000
65,924,000
65,925,000
65,926,000
65,927,000
65,928,000
65,929,000
65,930,000
65,931,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527154 | LOC106576753 | coding | upstream | 4046 | 65898427 ~ 65911535 (+) |
| hcar1-3 | LOC106576755 | coding | upstream | 86838 | 65826347 ~ 65828743 (+) |
| LOC110527123 | NA | coding | upstream | 116179 | 65794987 ~ 65799491 (+) |
| LOC110527114 | LOC106576759 | coding | upstream | 218253 | 65680024 ~ 65697328 (+) |
| LOC110527092 | tisd | coding | upstream | 433356 | 65478933 ~ 65482225 (+) |
| LOC110532572 | LOC106576752 | coding | downstream | 71583 | 65993868 ~ 65999848 (+) |
| LOC110527177 | LOC106576750 | coding | downstream | 77972 | 66000257 ~ 66003340 (+) |
| wu:fj16a03 | LOC100135970 | coding | downstream | 91900 | 66014081 ~ 66019044 (+) |
| prph2b | LOC106576743 | coding | downstream | 429126 | 66351411 ~ 66355894 (+) |
| LOC118965274 | LOC106576739 | coding | downstream | 495210 | 66417495 ~ 66424081 (+) |
| G72960 | NA | non-coding | upstream | 83973 | 65831379 ~ 65831608 (+) |
| G72954 | NA | non-coding | upstream | 109296 | 65805959 ~ 65806285 (+) |
| G72858 | LOC100136012 | non-coding | upstream | 179717 | 65686749 ~ 65735864 (+) |
| G72866 | NA | non-coding | upstream | 253279 | 65657325 ~ 65662302 (+) |
| G73321 | NA | non-coding | downstream | 59384 | 65981669 ~ 65981892 (+) |
| G73334 | NA | non-coding | downstream | 83748 | 66006033 ~ 66006238 (+) |
| G73311 | LOC106576750 | non-coding | downstream | 90592 | 66012877 ~ 66013340 (+) |
| G73488 | NA | non-coding | downstream | 330836 | 66253121 ~ 66253342 (+) |
| LOC110526969 | stk32c | other | upstream | 1013957 | 64809255 ~ 64946164 (+) |
| G70011 | NA | other | upstream | 2640285 | 63274963 ~ 63275296 (+) |
| G67930 | mcmbp | other | upstream | 4182193 | 61729765 ~ 61733388 (+) |
| G67806 | LOC106581772 | other | upstream | 4600329 | 61314874 ~ 61315252 (+) |
| G66188 | NA | other | upstream | 5973517 | 59941486 ~ 59942064 (+) |
| G73515 | NA | other | downstream | 365394 | 66287679 ~ 66288469 (+) |
| G74067 | LOC106576735 | other | downstream | 833922 | 66756207 ~ 66758984 (+) |
| G74139 | NA | other | downstream | 862050 | 66784335 ~ 66784969 (+) |
| G75747 | NA | other | downstream | 2452220 | 68374505 ~ 68374929 (+) |
