lrrc73 (lrrc73)


Basic Information

Item Value
gene id lrrc73
gene name lrrc73
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 66793420 ~ 66802542 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608559.2
AGCACAGCCCCGGTCAGACCAACGCCAGCACTGCACGTGATCAATAGCAATAACCTACTCTGTACTGAGACCACAGCTATATATATATTCGCCCTCGACTTGCATTTTTTACTCCTGAAGAAACATTTGCTCAGACCAGCAATATTTCCCGAGGTCTGCAGCCACACATATTCTTTGAGGAGGCTGCACGCGCCCTTGACGACTGAGGAAAACGAGCATTAGTAAACTAATTAGAGAGCAACATGTGACAGTCAGAAAAGGACTGATTGCAAAGATGTTTCTGATGACATTGAGAAGAGGGTGTCCATAGTAACCGCTACCTGCCGCAAAAGGGGCAAACAAACGATCGCCTTTGCTCCGGTGCCAAGCTCAAAACATGACTGGAATGCAACCCGTTTGTTCTGCATGAGGACCTGGAAAACTGCACGACATTCAATTTTATTGGAGCCTGGCTAATATGTATCGACGAATGTACCCATTCACGGCCTGTGTAAGAAGAATCGCGAAGGGTTTAGCGAGCTACGTGGTAGCAGGAGGTTATGTCAGCGCTTGAAACGGCGCATGGGGGTTTAGGAACGATTTAACTTCAGAACACCTACCTCGTGTGCTCTTTTCCTATGCATAGCCTAATAAGAAATGCTCAATTAAACCAGCTACAATACAGACAGTCTTGTAAATATCGGATATCGTAAATAGCCTATTGACTTTGAAATGTAATTTAACAGCCTACCGACGTTGGATAATTGTATGCCTACAATGCATGTCCATCTCTGCTGGGCACAAACCTTGAATGTAATGTAGGCCTAGTAGACAAACATTTACCAAAATGCTACCAGGTTCTATTCAAATAACGGGAGAGGCACTGTCGGGAGCTGAGATCAAGGATATTTGTGAAAGCCTAAAAGAGAACAGTGTGAGGCTTTTGTCTATCAGGGGATGTCAGCTTTCAGACCGAGACTTCGGACGGGTGTGTCGCGGAGTGACGGAGTCCCACTCACTGGCGCAACTCAACCTGAACCTCGGTGTGGTCTCCACCATCAACCGAACCAAGCATCTTGCCGATGCACTCAAGACCAACAGATCGATCCAGACCCTTTTTCTCCACGGAAGCCCCCTCCTGGATGCAGGATTGGTCACACTTAACACTGCTCTTTCCACTCACCCTTTACTGGTCTCTCTGGACCTGGGGGACTGTATGCTGGGGGACGAGGCACTGCGGCTAATCTGTGGCATGCTGCCTCCGGACGGGGCCAAATCAGGTCTTAGGGAGCTGACTCTGAGTGCAAACCCCAGCATCACCACAAAGGGCTGGGCCCGCTTGGCCATCGCTGTGGCCCACAGCTCCCAGCTCCGAGTCCTCAACCTGGACTACAACCCCCTGGGGGACCAGATTGCTGGTATGCTAGCCGTGGCTGTGGCATCCAGCAGAACTCTGGAGGTGTTAGATCTGGAGGGAACAGGCCTCACAAACCAGTCAGCACAGGTATTCCTGGACGTGGTGGAGAACTACCCCACCTGTCTGCGCATGCTGGTCCTGGCTGAGAACGCCATCAACCCCGAGCTGCAGCAGCAGATCTCAGACCTGCTCTCCGAGGGAGAGGAGGACGACGACAAAGAGAGCGAGGCCCGATGCAGCGCTGGCATCCCCACCAGGGAGAAAACCACCTGGGTCCCCCATAGTAACTCCCAACCCCAGAGGGTCCTGCTGACGTCAGGTCTAGGCGAGAGCCTACTAGCAGAGACTGAGATGTGATTCCACAGCCttcctaccttttttttttttaatacctcTTTTCCTTTTGCTAGTCTGCACATAATTGTGTTAAAGATCACCTAGTAGCCTGCAACCAATTACACTTTTTGCATGACCTGTAGCACTTTtacataacacaatacattttGGAGCAGGCACAAAATCCTTAAAACCCACACCAAGTGACTTATAGGCAatagtgaattatttattttaaacatgCACAGTCTATTTATAGTTCCGATTGTGAAGGTTATGTAACCAATACAAGTCTGTATGCTCTGATATGATAGATCGACTATATATGATTGTTGTGATGGTCTGATGTCAGAATAAATCTGTTTACATCTTCTTAAA

Function

symbol description
lrrc73 Orthologous to human LRRC73 (leucine rich repeat containing 73).

NR:

description
leucine-rich repeat-containing protein 73

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608559.2 True 2110 mRNA 0.48 6 66793420 66802542

Neighbor

gene id symbol gene type direction distance location
yipf3 yipf3 coding upstream 9765 66774868 ~ 66783655 (+)
LOC110527278 qki coding upstream 58768 66638925 ~ 66734658 (+)
LOC110527255 LOC106576738 coding upstream 225492 66550263 ~ 66567928 (+)
LOC118965274 LOC106576739 coding upstream 370533 66417495 ~ 66424081 (+)
prph2b LOC106576743 coding upstream 437526 66351411 ~ 66355894 (+)
dlk2 LOC106576732 coding downstream 82895 66885437 ~ 66954091 (+)
mea1 mea1 coding downstream 156296 66958838 ~ 66962136 (+)
LOC110527498 syndig1 coding downstream 340910 67143452 ~ 67194726 (+)
cytf cytf coding downstream 420766 67223308 ~ 67227387 (+)
LOC110532586 NA coding downstream 553528 67356070 ~ 67387886 (+)
G74146 NA non-coding upstream 602 66792619 ~ 66792818 (+)
G74140 NA non-coding upstream 7850 66785084 ~ 66785570 (+)
G74131 NA non-coding upstream 22288 66770907 ~ 66771132 (+)
G74128 NA non-coding upstream 23032 66768928 ~ 66770388 (+)
G74127 NA non-coding upstream 39569 66753518 ~ 66753851 (+)
G74174 NA non-coding downstream 33962 66836504 ~ 66837614 (+)
G74157 LOC106581475 non-coding downstream 49026 66851568 ~ 66852284 (+)
G74195 NA non-coding downstream 62870 66865412 ~ 66866511 (+)
G74208 dnph1 non-coding downstream 154578 66957120 ~ 66958578 (+)
G74266 NA non-coding downstream 257928 67060470 ~ 67062188 (+)
G74139 NA other upstream 8451 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 34436 66756207 ~ 66758984 (+)
G73515 NA other upstream 504951 66287679 ~ 66288469 (+)
LOC110527164 LOC106576754 other upstream 871135 65915581 ~ 65922285 (+)
G75747 NA other downstream 1571963 68374505 ~ 68374929 (+)
G78121 NA other downstream 3769123 70571665 ~ 70654961 (+)
ccdc85a ccdc85a other downstream 4233928 71036440 ~ 71076239 (+)
G82111 LOC106577091 other downstream 6749074 73551616 ~ 73571737 (+)
G83836 NA other downstream 8106683 74909225 ~ 74909806 (+)

Expression


Co-expression Network