dnph1 (dnph1)


Basic Information

Item Value
gene id dnph1
gene name dnph1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 66957113 ~ 66958777 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608693.2
AGTTATAAACCCCTCCCATTTCTGCGAAGAATCTTCttaaaatgtaattttaaaactaaccctaaccgtaacttAAACCTTAACCGCATTGCTAACCTTGTgtcctaaccttaaattaagacaaaaaagcaaaaataaataaataaatacatttttacgaTATAAACCATTTGACTTTGTGCCTGTGCTATCTAGTGGACACTGGATTTATTTTTTAGGCATCATTTTCACTCGACTCAATCAAAAACGTTTTCAGACACCTACCTATAAGTTAGCAAGCTAAAAGGAAAGCTATGCAAATTTACTTCTGTGGCAGTATTCGTGGAGGAAGACAGGATGTGGTTATTTATCAGAAAATTGTGCAGAAACTACAGCAATATGGAGAAGTTCTGACGGAGCACGTGAGTCACTGTGATCTGTCAGAGAAAGGTGAGGATGCTGTGCAGGACGGCGATACATTTATCCATGACCGAGATATGGAATGGCTTATGATGTCTGATGTGATAATAGCTGAAGTGACACAGCCCTCTCTTGGAGTTGGGTATGAGCTGGGAAGGGCCCTGGACATGCACAAGAAAATCCTCTGTCTTTTCCGGCCCTCCTCTGGAAAATCACTGTCTGCCATGATCAGAGGGGCGGTTGACGGGTCCCTGTTCCAGGTGCGAGActacaaagaggaggaggtggagggcatCCTGGAAGAATACTTCAACGGACTCGTCAAAGTCTGAGATGGTCTAACTGCACATCTATGGTGCCTTCAACAGTAAAAGAAGAGATATGGTTAGGATTCCTTAAGTTTCTCAATTAAGGATCTATGTTTGTCAAAAATGGTTATGAATCCATTTTTTTTGAGAGCGATTTTATAGATATGACATGTTTTGAATACATTTTCTACATACACCGTAAGCAAATGTCTTGTCTTTTTACTGATTGCATATCAGTTTGTTGAATGCTTATAAAGCTATATCATAAGGTCACA

Function

symbol description
dnph1 Predicted to enable deoxyribonucleoside 5'-monophosphate N-glycosidase activity. Predicted to be involved in deoxyribonucleoside monophosphate catabolic process and positive regulation of cell growth. Predicted to be located in nucleus. Orthologous to human DNPH1 (2'-deoxynucleoside 5'-phosphate N-hydrolase 1).

NR:

description
2'-deoxynucleoside 5'-phosphate N-hydrolase 1

GO:

id name namespace
GO:0009116 nucleoside metabolic process biological_process
GO:0009117 nucleotide metabolic process biological_process
GO:0009159 deoxyribonucleoside monophosphate catabolic process biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0050144 nucleoside deoxyribosyltransferase activity molecular_function
GO:0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity molecular_function

KEGG:

id description
K22928 DNPH1; 2'-deoxynucleoside 5'-phosphate N-hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608693.2 True 982 mRNA 0.40 4 66957113 66958777

Neighbor

gene id symbol gene type direction distance location
tjap1 tjap1 coding downstream 73382 66806836 ~ 66883731 (-)
ncoa4 LOC106576735 coding downstream 187739 66756214 ~ 66769374 (-)
LOC110527294 LOC106576736 coding downstream 210862 66741091 ~ 66746251 (-)
prkn park2 coding downstream 406928 66426789 ~ 66550185 (-)
LOC110527220 LOC106576739 coding downstream 530476 66403407 ~ 66426637 (-)
LOC110527436 ppp2r5d coding upstream 6887 66965664 ~ 67010646 (-)
znf318 znf318 coding upstream 55688 67014465 ~ 67038832 (-)
si:dkeyp-121d4.3 LOC106576728 coding upstream 82419 67039268 ~ 67096685 (-)
LOC110527477 LOC106576725 coding upstream 109919 67068696 ~ 67135789 (-)
LOC110527505 apmap coding upstream 267952 67226729 ~ 67235434 (-)
G74445 NA non-coding downstream 168911 66787911 ~ 66788202 (-)
G74386 NA non-coding downstream 222466 66663962 ~ 66734647 (-)
G74382 NA non-coding downstream 235570 66647427 ~ 66721543 (-)
G74414 NA non-coding downstream 274795 66680072 ~ 66682318 (-)
G74688 NA non-coding upstream 266625 67225402 ~ 67225691 (-)
G74692 NA non-coding upstream 277339 67236116 ~ 67236327 (-)
G74693 NA non-coding upstream 278332 67237109 ~ 67237567 (-)
G74699 NA non-coding upstream 312957 67271734 ~ 67271956 (-)
LOC110526867 LOC100136521 other downstream 2575757 64369803 ~ 64384521 (-)
G70013 NA other downstream 3679361 63277208 ~ 63277752 (-)
G69210 NA other downstream 4538817 62411522 ~ 62418296 (-)
LOC110526417 LOC106576819 other downstream 4974718 61981652 ~ 61983330 (-)
LOC110527584 LOC106576720 other upstream 427732 67386509 ~ 67389299 (-)
LOC110527687 sncg other upstream 710812 67669589 ~ 67681775 (-)
sdhaf4 LOC106576700 other upstream 1199184 68157900 ~ 68162024 (-)
G75682 NA other upstream 1251403 68210180 ~ 68211706 (-)

Expression


Co-expression Network