mea1 (mea1)


Basic Information

Item Value
gene id mea1
gene name mea1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 66958838 ~ 66962136 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608674.2
GTCCTTTCGCCTTTTGGCGCCATCTCGTGGCACACATGCTGGCGCCAAAACGCGAACGCGATGACGTCAAATCCGCCTCGATTTCCGTTTCGTTGATTTAGGAACATCGACAGTGACTTGGTGGCCCAAAAACATTGAAGAAAATATAACTGTCAAGCCAGGGCTTGTGCCTGAGTCCGGCGTCTGTGAATGGAAGTGGAGATAGCATTCGAGATGGGTCCTGAGAGAATCTTACCAAACTCTGAGGAGGAGCTGGGCCAGGAGCGGCCGTCGGATGGTGGAGTGGgcggggagtggagtggagaggacatGGAGGAGGGCGGTGTGggagatgatgatgaggaggatgatgatggagGTTACTATTACCAGCCACTAAACCAGGACCCTGATGGACTAAATGCTGCACCTGGAGACCAGCCTGAGGATATGCCCCCAGTAGCAGAGCAACTGCATGAAGTTCAGGAGAGAATAGAGTCAATGGGCTTACATCTTCCCCAGCCCCCTCCCCTAgacagtgatgaggaggaggagccaGAAGGAGCCTCTGCCCTGAGCAGCGCAGCCTCCATCCCCATGGATGAAGACCACGTGGAGCTGGTGAAGAGGACCATGGCAGCAGTGGCCCTGCCCTCTCTGGCTATCCCAACCTGGGCTCAGGAGATCTCTGACGACCAATGGAAGGACATGGTCCAACAGACACTCCAGACTCGCCAAAGCTCTGGAGGCCTGATGCTAGAGCGCAAATAAGACTGAATGGGACTCCTTCCCACAGTCTGTCTAACTGTGCCATGCATTTCACCATCACATTTACCTCAGGGGAGTCTGAGCTGAGCTCCTCTGAGCGGGTCATGAGTTCTAGGTGTCTCAAATCTCAATTTCCAATTCCTATTAGATTAAGATATCTCTCCTAAATGTGTTTGATAGGAGCCTCTGGGTACTCACTACTTctaagggcggcaggtagctagtaaccgaaaggtttctggttcaaaccccaagccgactaggtgaaaagtcTCTGtgccctttgagcaaggcacttaaaacGAATTGCGCCTGTAAGTCACTcttgataagagcatctgctaaatgactaaaatgtaaacattTACTTGGTATTTGTAAAGTTTAATGTGAATGAGGTCAAATGAATGAGTATAGTATATTTTTCTCTCAGATCATGCAAACTCTACTGCTTCTGGAAGGAAGAACTTGAATCAGTGTACAGCAGTTTAAAGTATAATGAGGCTCAATGGTTATGACAGGTAAAGCCAATTGGCCTTGAGAACAGAAACACTATGTGAACTAGGAGTTCCCCCACCCTAAGCTTTTTGAAACGTTCCAGTGTACAGTCAAACCACCTTTCCAACACCAGATCGCCTTTGTTATTTTTGGGTGGTGATTACCATATTGCAATACTGTTTAATCATTGTCTTTGTTgagcattatatatatatatatatgggcatCCATAGGAAATGAACAATAATGTCCCTTGTCTCGTAACGTGTTAAtttcctggggacccaaaggagtgCACATTTTAGACACCTGATTCCACTCATATGTTTCTGATGAATGGAATCGGGTGTGTAGTGTTAGGGTAAAAACacaaatgtgcacccctttgggtccccaggatgATGGATATTGACTTGTTTTGTGTGTGAGGGCAACATATTTCCAAACTCGATGGATGTCAAACATGTCCACTTTATTTTTTGCCTTTTTCTTTTGTTCTGTACATACATGAACATCTGTACAAAATGATTTTCATACTATGTAATGCTCTAACTAATTAAAGTACAACCTATGTACATATGACATGGAA
>XM_021608682.2
TCTCGTGGCACACATGCTGGCGCCAAAACGCGAACGCGATGACGTCAAATCCGCCTCGATTTCCGTTTCGTTGATTTAGGAACATCGACAGTGACTTGGTGGCCCAAAAACATTGAAGAAAATATAACTGTCAAGGGCTTGTGCCTGAGTCCGGCGTCTGTGAATGGAAGTGGAGATAGCATTCGAGATGGGTCCTGAGAGAATCTTACCAAACTCTGAGGAGGAGCTGGGCCAGGAGCGGCCGTCGGATGGTGGAGTGGgcggggagtggagtggagaggacatGGAGGAGGGCGGTGTGggagatgatgatgaggaggatgatgatggagGTTACTATTACCAGCCACTAAACCAGGACCCTGATGGACTAAATGCTGCACCTGGAGACCAGCCTGAGGATATGCCCCCAGTAGCAGAGCAACTGCATGAAGTTCAGGAGAGAATAGAGTCAATGGGCTTACATCTTCCCCAGCCCCCTCCCCTAgacagtgatgaggaggaggagccaGAAGGAGCCTCTGCCCTGAGCAGCGCAGCCTCCATCCCCATGGATGAAGACCACGTGGAGCTGGTGAAGAGGACCATGGCAGCAGTGGCCCTGCCCTCTCTGGCTATCCCAACCTGGGCTCAGGAGATCTCTGACGACCAATGGAAGGACATGGTCCAACAGACACTCCAGACTCGCCAAAGCTCTGGAGGCCTGATGCTAGAGCGCAAATAAGACTGAATGGGACTCCTTCCCACAGTCTGTCTAACTGTGCCATGCATTTCACCATCACATTTACCTCAGGGGAGTCTGAGCTGAGCTCCTCTGAGCGGGTCATGAGTTCTAGGTGTCTCAAATCTCAATTTCCAATTCCTATTAGATTAAGATATCTCTCCTAAATGTGTTTGATAGGAGCCTCTGGGTACTCACTACTTctaagggcggcaggtagctagtaaccgaaaggtttctggttcaaaccccaagccgactaggtgaaaagtcTCTGtgccctttgagcaaggcacttaaaacGAATTGCGCCTGTAAGTCACTcttgataagagcatctgctaaatgactaaaatgtaaacattTACTTGGTATTTGTAAAGTTTAATGTGAATGAGGTCAAATGAATGAGTATAGTATATTTTTCTCTCAGATCATGCAAACTCTACTGCTTCTGGAAGGAAGAACTTGAATCAGTGTACAGCAGTTTAAAGTATAATGAGGCTCAATGGTTATGACAGGTAAAGCCAATTGGCCTTGAGAACAGAAACACTATGTGAACTAGGAGTTCCCCCACCCTAAGCTTTTTGAAACGTTCCAGTGTACAGTCAAACCACCTTTCCAACACCAGATCGCCTTTGTTATTTTTGGGTGGTGATTACCATATTGCAATACTGTTTAATCATTGTCTTTGTTgagcattatatatatatatatatgggcatCCATAGGAAATGAACAATAATGTCCCTTGTCTCGTAACGTGTTAAtttcctggggacccaaaggagtgCACATTTTAGACACCTGATTCCACTCATATGTTTCTGATGAATGGAATCGGGTGTGTAGTGTTAGGGTAAAAACacaaatgtgcacccctttgggtccccaggatgATGGATATTGACTTGTTTTGTGTGTGAGGGCAACATATTTCCAAACTCGATGGATGTCAAACATGTCCACTTTATTTTTTGCCTTTTTCTTTTGTTCTGTACATACATGAACATCTGTACAAAATGATTTTCATACTATGTAATGCTCTAACTAATTAAAGTACAACCTATGTACATATGACATGGAA

Function

symbol description
mea1 Predicted to act upstream of or within spermatogenesis. Orthologous to human MEA1 (male-enhanced antigen 1).

NR:

description
male-enhanced antigen 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608674.2 False 1834 mRNA 0.46 4 66958838 66962136
XM_021608682.2 True 1808 mRNA 0.46 4 66958860 66962136

Neighbor

gene id symbol gene type direction distance location
dlk2 LOC106576732 coding upstream 4747 66885437 ~ 66954091 (+)
lrrc73 lrrc73 coding upstream 156296 66793420 ~ 66802542 (+)
yipf3 yipf3 coding upstream 175183 66774868 ~ 66783655 (+)
LOC110527278 qki coding upstream 224186 66638925 ~ 66734658 (+)
LOC110527255 LOC106576738 coding upstream 390910 66550263 ~ 66567928 (+)
LOC110527498 syndig1 coding downstream 181316 67143452 ~ 67194726 (+)
cytf cytf coding downstream 261172 67223308 ~ 67227387 (+)
LOC110532586 NA coding downstream 393934 67356070 ~ 67387886 (+)
pygb pygb coding downstream 425905 67388041 ~ 67413285 (+)
gins1 gins1 coding downstream 481570 67443706 ~ 67446493 (+)
G74208 dnph1 non-coding upstream 260 66957120 ~ 66958578 (+)
G74195 NA non-coding upstream 92327 66865412 ~ 66866511 (+)
G74157 LOC106581475 non-coding upstream 106554 66851568 ~ 66852284 (+)
G74174 NA non-coding upstream 121224 66836504 ~ 66837614 (+)
G74146 NA non-coding upstream 166020 66792619 ~ 66792818 (+)
G74266 NA non-coding downstream 98334 67060470 ~ 67062188 (+)
G74259 LOC106576725 non-coding downstream 115507 67077643 ~ 67087690 (+)
G74262 NA non-coding downstream 127769 67089905 ~ 67090352 (+)
G74285 NA non-coding downstream 144223 67106359 ~ 67106890 (+)
G74630 NA non-coding downstream 256966 67219102 ~ 67219405 (+)
G74139 NA other upstream 173869 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 199854 66756207 ~ 66758984 (+)
LOC118965274 LOC106576739 other upstream 534757 66417495 ~ 66424081 (+)
G73515 NA other upstream 670369 66287679 ~ 66288469 (+)
LOC110527164 LOC106576754 other upstream 1036553 65915581 ~ 65922285 (+)
G75747 NA other downstream 1412369 68374505 ~ 68374929 (+)
G78121 NA other downstream 3609529 70571665 ~ 70654961 (+)
ccdc85a ccdc85a other downstream 4074334 71036440 ~ 71076239 (+)
G82111 LOC106577091 other downstream 6589480 73551616 ~ 73571737 (+)
G83836 NA other downstream 7947089 74909225 ~ 74909806 (+)

Expression


Co-expression Network