LOC110527505 (apmap)


Basic Information

Item Value
gene id LOC110527505
gene name apmap
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 67226729 ~ 67235434 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608822.2
AAAAAAATGCGTATTGCGTAAAAACTGTCCACGGCCGGGAAAGCCCGTCGTTGAATGCTGTAGCTATCACTACGATGTCCTGCATGTGTCTGTCTTTACAAGCAATCGAATTATCAACCTTCTCATGTAGCAAGCTGCTTACCTGAAACCTCATTTTTGGATAGAGTGATAGTAGAAGTCTCATTTCAGTATGAATGAGCCAGAGGGACTGCGGTTCAGGAGGCTGAACAGACCACAGATTATCACGGACGAATTACAGGAACCCCAATACAAGGGCACCAGTACCTACAGTGGAAAGGTATTCCGTGTGACCCTGGTGACCCTGGGAGGATGCCTGATCCTTCCATTGCTTGTAGTCTTTTTTCTGCTCGAGTCTCCTATTCACCCTGAGCTGCTCAGccTCAATGAGCCTCCCCTTATGTCTGGGTGTTACGAGCCCAACTTTAAGCTGAGGGAAGCACAGCGGCTGTTTGAGGACCAGCTTGTTGGCCCAGAGTCCATTGCCAACTTCGGAGATGTCATTTACACAGGTACGGCTGACGGGAAGATAGTGAAGATTGAAGGCAAGAGCATCACTGTTATAGCCAGACTTGGCAAGCCACCGTGTGATGGATCCCGTGAGCAGGAGCCTAGCTGTGGACGACCCCTGGGTATCAGAGTGGGTCCTAACGGTACCCTTTTTGTAGCTGACGCCTATCTGGGGCTGTTCGAGGTTAACCCTGTCACAGGTGAGGTGACCAACCTGGTGTCGGCTGGGCAGATGGTTGGGGGCCGGAGGCTCTCCTTCGTCAATGACCTGGATGTAACACAGGATGGGAGAAAAGTGTACTTCACAGATTCTAGCAGCAGGTGGCAGCGCAGAGACTACCTTCATCTCATCATGGAGGCCACAGCAGATGGACGTGTGTTAGAGTACGACACAGAGACCAAGGAGGTAACCGTGTTGATGGAGAACCTTCGTTTTGCCAACGGGATCCAGCTTTTCCCTGATGAGGAGTCTGTGCTGGTGACTGAGACTACCATGGCTAGGATTCGCAGGGTCCATGTGTCAGGTCTAAATAAAGGAGGAATGGACACATTTGTTGACAACCTGCCTGGTTTCCCTGACAATATCCGTCGCAGCTCTTCTGGAGGGTACTGGGTGGCCATGTCAGCGGTGCGGCCCAACCCTGGCTTCTCCATGCTGGACTTCCTGTCCCAGAAGCCCTGGATCAAGAAGCTCATCTTTAAGcTCTTCAGCCAAGACATGCTGATGAAGTTTGTGCCTCGCTACAGCCTGGTGATAGAGCTGCAGGAGAGCGGGACGTGCGTGCGTAGCTTCCATGACCCCCACGGCATGGTGGCGGCCTACGTCAGTGAGGCACACGAGCACGACGGCCACCTCTACTTAGGCTCTTTCCGCTCCCCTTACCTCTGCAAGCTGGATCTCAGCAAGGTGTGAGCTGAGAGCTGAGCACAACCACTTTCTCAGACACGACCCATATATGAGACTGCTGTCTGCCTACCTAACACCTCACTACCTAGTCTGTTTTCCAATAACAGCAAAAACATCAGAATTGAAAAGAATGGCTTCATGCTTGATATGCTGCATTTGCATTGCTTTTCACCAGCTTCAGGAAAAAATGGACTAGTCTTCATTAAGTATCTGCACTATTAAGGCGCATTTGACTGGGATGCATATCCATCGTTTCTAGTCTTATCAGCCTACAATTAACTATTAACCCTTTAATTTCTGTTGACAGTGCATCTCAGTAGTTTCTCAaggaatgttttttatttaaccaaaCAGTCTTTGGGCCAAATAGTTTGCCCAAAAATCCCCATGTAAGTACATTGTCTTTCAGGtctgtgttttaggttgttgaaATGTGCCAaatttgttcttatttttgttttgtttgtttaaacCATTCAGTATCTCAACTTTTAATTTCATTTTTGCAATAAAGCTCTCATCTCACCCTTAAATATAACTGACAATGTTATTATTGTACTTGGAGAATTTCAAAGAGTTAATTTTATCAGTTGAAATACACACCGAGTATTATTTTAAGAGTGCCACTTTGAACTGATTTATTTTGTGTGTATTTAGAAATCCAAGATCTTGTTCATCATAATAAAGGTGATGCAAAAAGATTCCAAAATAAGTATGAATCATTTCCCCTTGTTGTGATACATTTCATCTGCTTTTGTATATTGCACTGTCAACTACCTTACGTAATGTAAATGTTTTGCTCGATGTTGAATGCTGCTGGCCTTCAGCTGAGTTTCCTTTGAATTAAAACAGTAA

Function

symbol description
apmap Predicted to enable strictosidine synthase activity. Predicted to act upstream of or within biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in pronephric duct. Orthologous to human APMAP (adipocyte plasma membrane associated protein).

NR:

description
PREDICTED: adipocyte plasma membrane-associated protein

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016844 strictosidine synthase activity molecular_function

KEGG:

id description
K21407 APMAP; adipocyte plasma membrane-associated protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608822.2 True 2290 mRNA 0.46 9 67226729 67235434

Neighbor

gene id symbol gene type direction distance location
LOC110527477 LOC106576725 coding downstream 90940 67068696 ~ 67135789 (-)
si:dkeyp-121d4.3 LOC106576728 coding downstream 167762 67039268 ~ 67096685 (-)
znf318 znf318 coding downstream 187897 67014465 ~ 67038832 (-)
LOC110527436 ppp2r5d coding downstream 216083 66965664 ~ 67010646 (-)
dnph1 dnph1 coding downstream 267952 66957113 ~ 66958777 (-)
acss1 acss1 coding upstream 16858 67252292 ~ 67271239 (-)
LOC110527518 vsx1 coding upstream 53128 67288562 ~ 67291218 (-)
LOC110527584 LOC106576720 coding upstream 151313 67386509 ~ 67389299 (-)
abhd12 LOC106576716 coding upstream 180305 67415739 ~ 67443770 (-)
ninl ninl coding upstream 211007 67446441 ~ 67499228 (-)
G74688 NA non-coding downstream 1038 67225402 ~ 67225691 (-)
tjap1 tjap1 non-coding downstream 343042 66806836 ~ 66883731 (-)
G74445 NA non-coding downstream 438527 66787911 ~ 66788202 (-)
G74386 NA non-coding downstream 492082 66663962 ~ 66734647 (-)
G74692 NA non-coding upstream 682 67236116 ~ 67236327 (-)
G74693 NA non-coding upstream 1675 67237109 ~ 67237567 (-)
G74699 NA non-coding upstream 36300 67271734 ~ 67271956 (-)
G74711 NA non-coding upstream 57702 67293136 ~ 67293369 (-)
G74715 NA non-coding upstream 62796 67298230 ~ 67298971 (-)
LOC110526867 LOC100136521 other downstream 2845373 64369803 ~ 64384521 (-)
G70013 NA other downstream 3948977 63277208 ~ 63277752 (-)
G69210 NA other downstream 4808433 62411522 ~ 62418296 (-)
LOC110527687 sncg other upstream 434155 67669589 ~ 67681775 (-)
sdhaf4 LOC106576700 other upstream 922527 68157900 ~ 68162024 (-)
G75682 NA other upstream 974746 68210180 ~ 68211706 (-)
LOC110527951 coda1 other upstream 1340159 68575379 ~ 68690343 (-)

Expression


Co-expression Network