abhd12 (LOC106576716)


Basic Information

Item Value
gene id abhd12
gene name LOC106576716
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 67415739 ~ 67443770 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608934.2
CCAGGGGAAAGGTTGATTTGATCAGCTGGTCTCTGCAGATATCGGACTTCTACAAACAATGTAGCTAGCAAAAGTGCTGATAGTCAGCGGTGCTGGGGAGAAAACAACGGCACCCTGACCTCATCTTTACCCGGCTTCTTACCGAGAATTCGTTGCCAAACTACATCACCGGCGCTGCCTAGTATTGCTGTCAAATCAAATGCAATAGTGATAGACGGTGTTTCACATCCTTTGTCGCTTTTCTTTCACATTGTGCTTTTACATTTCAGTGATGCGAAAGCGAAATAACTCGCTCACCGTGGACCATGACAGCTCTTCCACCAACACATTGCTGGACAGCAGTCCGGATATAAACTACTGTCACAAGAGAGGGGAAGGGGTTCCTGAGCCTTGTGTACCATCTAGCTCGGAATCAGACAAAAAAATGGGCAGACCATTTCGAAGATATGGCCTAATGGGCAGATTGAAGAGGATCCTCCTGTGGGTGCTGGGAGTCTACATAACCATCCCCTTCCTCGTCAAACTATGCCCCTCAATTCAGGCAAAACTAGTATTTTTAAATTTTGTGCGGCTGCCCTATTTCATTGACTTGAAAAGGCCACAAGACCATGGGTTGAACCACACCTATAACTTCTACCTGCAGCCAGAGACTGGTGTCAACATTGGTGTATGGCACACAGTCCCAGACCAGATGTGGAAAGAGGCGCAGGGGAAGGACAGAGAGTGGTATGACAGTACCTTTAAATCGCCCTATCCAGTCATGCTGTACCTTCACGGCAACGCTGGGACAAGAGGAGGGGACCATAGAGTTCAGCTCTACAAGGTCCTTAGTTTATTAGGCTACCACGTAGTCACATTTGATTATAGAGGTTGGGGTGATTCAGACGGGAGCCCCTCTGAGAGCGGAATGACGTCAGATGCCCTGTTCCTCTACCAGTGGATGAAGGAGAGGGTGGGGAGCAAACCCCTCAACGTCTGGGGCCACTCACTGGGGACAGGGGTGGCCACTAACCTAGTCCGACGTCTGTGTGACAGAGGGACGCCCCCAAACTCCTTAGTCTTGGAATCTCCATTCACCAACATCCGAGAGGAGGCCAAGAGCCACCCCTTCTCTATGGTCTACCGGTACCTTCCAGGCTTTGAATGGTTCTTTTTAGATACCATTTCAGCAAACGACATTCGATTTGCCAGTGACGAAAATGTGGACCACATATCCTGTCCATTGCTTATCCTTCATGCCGAGGATGACTCAGTCGTGCCCTTCCATCTAGGGAAGAAGctgtaCAACATTGCTTCCCAGTCCAAGAGCCTGAGTGGACACAAGCTTCAGTTCATcccctttcctgtctctctggccTACAAGCACAAGTTCATCTACAGGAGTCCTGAGCTGCCACACATACTCAGTGACTTCCTTGGCACGACTCATCCCCATGCATAACCGACAAGAACATTTCCACCTGTCCATTGTTTCCTCTTacaacccccacccaccccccacacacgcgcacacacacacactgaaactctTTGACTGTATGCTTTATGGTTGGTGTGTACATATCTCATAAAACATTGAAATGTACACGCATGGACTGAAGATGATGCATCCATTCCTTTATTTAGCATTCCTTTGACACCTAAAATTCCTGCAAGACATAAACGGAACACTGGCAAAGAGCGAGGGATGGACAACTGGCTTGGCTTGTTGTCAAGGTTACACAAACCAAGAGGATGGCTTGAGCACAAAGATGAAATATGCACATATTTTAAGGAGCCAAGACAAACATCATGGAGTGGGAAGAACAGTGGATCGAGCAGGGAAGCAGTGTTTTTAATTGCACAATGTTTGGGGAATAGACATTCATACACAAGGCGAGGAAGGAGAACGTTTTTCATTTTACAACTCATCTGCAGCACAGAGCAAATTCTGTTTATACCAGTCCAGTTTATTTTCCCAATtttatttttgttacattacagatcATGATTTAAAAGTATCTATTATATTTGACTGATCTCAGATGAGACATTTTGGATTCTAGCTTTTCTCTATTAAAGGAAATGTATAACTTGAATTAAATATTATACATTTGACCTAACATTGATATTGGTTTTGGGCTTGTCAGTCTTATTATTGTCCGCCTTAAAGAGAAGACTAGTCGCTTTATTTTAGAACCCCTTAGGACACTTCAGGGCAAGCTCATGAATTTTAACATTTCA
>XM_021608942.2
CGGAAACTATGGGTACCGATGAAAGACAAATtgtaccaacccaccacacctgCTGCTGTCACCGCTGGCGGACAGCACATTACCGGTGTCCTCGCTTGTCATGTTGTcagtttaataaaaaaataacaacaaaGTGATGCGAAAGCGAAATAACTCGCTCACCGTGGACCATGACAGCTCTTCCACCAACACATTGCTGGACAGCAGTCCGGATATAAACTACTGTCACAAGAGAGGGGAAGGGGTTCCTGAGCCTTGTGTACCATCTAGCTCGGAATCAGACAAAAAAATGGGCAGACCATTTCGAAGATATGGCCTAATGGGCAGATTGAAGAGGATCCTCCTGTGGGTGCTGGGAGTCTACATAACCATCCCCTTCCTCGTCAAACTATGCCCCTCAATTCAGGCAAAACTAGTATTTTTAAATTTTGTGCGGCTGCCCTATTTCATTGACTTGAAAAGGCCACAAGACCATGGGTTGAACCACACCTATAACTTCTACCTGCAGCCAGAGACTGGTGTCAACATTGGTGTATGGCACACAGTCCCAGACCAGATGTGGAAAGAGGCGCAGGGGAAGGACAGAGAGTGGTATGACAGTACCTTTAAATCGCCCTATCCAGTCATGCTGTACCTTCACGGCAACGCTGGGACAAGAGGAGGGGACCATAGAGTTCAGCTCTACAAGGTCCTTAGTTTATTAGGCTACCACGTAGTCACATTTGATTATAGAGGTTGGGGTGATTCAGACGGGAGCCCCTCTGAGAGCGGAATGACGTCAGATGCCCTGTTCCTCTACCAGTGGATGAAGGAGAGGGTGGGGAGCAAACCCCTCAACGTCTGGGGCCACTCACTGGGGACAGGGGTGGCCACTAACCTAGTCCGACGTCTGTGTGACAGAGGGACGCCCCCAAACTCCTTAGTCTTGGAATCTCCATTCACCAACATCCGAGAGGAGGCCAAGAGCCACCCCTTCTCTATGGTCTACCGGTACCTTCCAGGCTTTGAATGGTTCTTTTTAGATACCATTTCAGCAAACGACATTCGATTTGCCAGTGACGAAAATGTGGACCACATATCCTGTCCATTGCTTATCCTTCATGCCGAGGATGACTCAGTCGTGCCCTTCCATCTAGGGAAGAAGctgtaCAACATTGCTTCCCAGTCCAAGAGCCTGAGTGGACACAAGCTTCAGTTCATcccctttcctgtctctctggccTACAAGCACAAGTTCATCTACAGGAGTCCTGAGCTGCCACACATACTCAGTGACTTCCTTGGCACGACTCATCCCCATGCATAACCGACAAGAACATTTCCACCTGTCCATTGTTTCCTCTTacaacccccacccaccccccacacacgcgcacacacacacactgaaactctTTGACTGTATGCTTTATGGTTGGTGTGTACATATCTCATAAAACATTGAAATGTACACGCATGGACTGAAGATGATGCATCCATTCCTTTATTTAGCATTCCTTTGACACCTAAAATTCCTGCAAGACATAAACGGAACACTGGCAAAGAGCGAGGGATGGACAACTGGCTTGGCTTGTTGTCAAGGTTACACAAACCAAGAGGATGGCTTGAGCACAAAGATGAAATATGCACATATTTTAAGGAGCCAAGACAAACATCATGGAGTGGGAAGAACAGTGGATCGAGCAGGGAAGCAGTGTTTTTAATTGCACAATGTTTGGGGAATAGACATTCATACACAAGGCGAGGAAGGAGAACGTTTTTCATTTTACAACTCATCTGCAGCACAGAGCAAATTCTGTTTATACCAGTCCAGTTTATTTTCCCAATtttatttttgttacattacagatcATGATTTAAAAGTATCTATTATATTTGACTGATCTCAGATGAGACATTTTGGATTCTAGCTTTTCTCTATTAAAGGAAATGTATAACTTGAATTAAATATTATACATTTGACCTAACATTGA

Function

NR:

description
monoacylglycerol lipase ABHD12-like isoform X2

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component
GO:0047372 acylglycerol lipase activity molecular_function

KEGG:

id description
K13704 ABHD12; abhydrolase domain-containing protein 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608934.2 False 2223 mRNA 0.46 13 67415739 67443275
XM_021608942.2 True 1973 mRNA 0.46 14 67415854 67443770
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110527584 LOC106576720 coding downstream 26440 67386509 ~ 67389299 (-)
LOC110527518 vsx1 coding downstream 124521 67288562 ~ 67291218 (-)
acss1 acss1 coding downstream 144500 67252292 ~ 67271239 (-)
LOC110527505 apmap coding downstream 180305 67226729 ~ 67235434 (-)
LOC110527477 LOC106576725 coding downstream 279950 67068696 ~ 67135789 (-)
ninl ninl coding upstream 2671 67446441 ~ 67499228 (-)
LOC118966711 LOC106606039 coding upstream 70990 67514760 ~ 67515221 (-)
LOC118965291 NA coding upstream 71516 67515286 ~ 67516815 (-)
LOC110527634 nfkb2 coding upstream 131284 67575052 ~ 67593740 (-)
LOC110527672 NA coding upstream 194961 67638731 ~ 67642121 (-)
G75246 pygb non-coding downstream 2483 67402541 ~ 67413256 (-)
G75254 NA non-coding downstream 30364 67385119 ~ 67385375 (-)
G75237 NA non-coding downstream 41020 67374499 ~ 67374719 (-)
G75236 NA non-coding downstream 41645 67373883 ~ 67374094 (-)
G75234 NA non-coding downstream 47338 67368186 ~ 67368401 (-)
G75314 NA non-coding upstream 75044 67518814 ~ 67519037 (-)
G75315 NA non-coding upstream 76143 67519913 ~ 67520212 (-)
G75319 NA non-coding upstream 80946 67524716 ~ 67524946 (-)
G75322 NA non-coding upstream 84769 67528539 ~ 67529102 (-)
LOC110527436 ppp2r5d other downstream 405152 66965664 ~ 67010646 (-)
tjap1 tjap1 other downstream 592923 66806836 ~ 66883731 (-)
LOC110526867 LOC100136521 other downstream 3034383 64369803 ~ 64384521 (-)
G70013 NA other downstream 4137987 63277208 ~ 63277752 (-)
LOC110527687 sncg other upstream 225819 67669589 ~ 67681775 (-)
sdhaf4 LOC106576700 other upstream 714191 68157900 ~ 68162024 (-)
G75682 NA other upstream 766410 68210180 ~ 68211706 (-)
LOC110527951 coda1 other upstream 1131823 68575379 ~ 68690343 (-)
LOC118965321 LOC106576963 other upstream 2639070 70082835 ~ 70088715 (-)

Expression

abhd12(LOC106576716) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 200.
End of interactive chart.

abhd12(LOC106576716) Expression in each Bioproject

Bar chart with 21 bars.
abhd12(LOC106576716) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
End of interactive chart.

Co-expression Network