Gene
RNA
| Item | Value |
|---|---|
| gene id | gins1 |
| gene name | gins1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 67443706 ~ 67446493 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| gins1 | Predicted to be involved in DNA strand elongation involved in mitotic DNA replication. Predicted to act upstream of or within DNA replication. Predicted to be located in nucleus. Predicted to be part of GINS complex. Is expressed in proliferative region. Human ortholog(s) of this gene implicated in immunodeficiency 55. Orthologous to human GINS1 (GINS complex subunit 1). |
| description |
|---|
| DNA replication complex GINS protein PSF1 |
| id | name | namespace |
|---|---|---|
| GO:0006260 | DNA replication | biological_process |
| GO:0005634 | nucleus | cellular_component |
| id | description |
|---|---|
| K10732 | GINS1, PSF1; GINS complex subunit 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021608956.2 | True | 1294 | mRNA | 0.40 | 7 | 67443706 | 67446493 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pygb | pygb | coding | upstream | 30421 | 67388041 ~ 67413285 (+) |
| LOC110532586 | NA | coding | upstream | 56699 | 67356070 ~ 67387886 (+) |
| cytf | cytf | coding | upstream | 216319 | 67223308 ~ 67227387 (+) |
| LOC110527498 | syndig1 | coding | upstream | 248980 | 67143452 ~ 67194726 (+) |
| mea1 | mea1 | coding | upstream | 481570 | 66958838 ~ 66962136 (+) |
| aifm2 | amid | coding | downstream | 52694 | 67499187 ~ 67506681 (+) |
| psda | LOC106576711 | coding | downstream | 82118 | 67528611 ~ 67575049 (+) |
| glud1 | gdh01 | coding | downstream | 150184 | 67596677 ~ 67638420 (+) |
| mmrn2a | mmrn2 | coding | downstream | 259298 | 67705791 ~ 67724360 (+) |
| LOC118965297 | NA | coding | downstream | 669635 | 68116128 ~ 68117384 (+) |
| G74778 | LOC106581475 | non-coding | upstream | 64782 | 67378576 ~ 67378924 (+) |
| G74776 | NA | non-coding | upstream | 65779 | 67377673 ~ 67377927 (+) |
| G74773 | NA | non-coding | upstream | 72750 | 67370715 ~ 67370956 (+) |
| G74772 | NA | non-coding | upstream | 73782 | 67369698 ~ 67369924 (+) |
| G74852 | NA | non-coding | downstream | 65936 | 67512429 ~ 67512806 (+) |
| G74851 | NA | non-coding | downstream | 67358 | 67513851 ~ 67514529 (+) |
| G74814 | NA | non-coding | downstream | 130165 | 67576658 ~ 67576949 (+) |
| G74799 | NA | non-coding | downstream | 139875 | 67586368 ~ 67586598 (+) |
| G74875 | NA | non-coding | downstream | 143743 | 67590236 ~ 67590560 (+) |
| G74139 | NA | other | upstream | 658737 | 66784335 ~ 66784969 (+) |
| G74067 | LOC106576735 | other | upstream | 684722 | 66756207 ~ 66758984 (+) |
| LOC118965274 | LOC106576739 | other | upstream | 1019625 | 66417495 ~ 66424081 (+) |
| G73515 | NA | other | upstream | 1155237 | 66287679 ~ 66288469 (+) |
| LOC110527164 | LOC106576754 | other | upstream | 1521421 | 65915581 ~ 65922285 (+) |
| G75747 | NA | other | downstream | 928012 | 68374505 ~ 68374929 (+) |
| G78121 | NA | other | downstream | 3125172 | 70571665 ~ 70654961 (+) |
| ccdc85a | ccdc85a | other | downstream | 3589977 | 71036440 ~ 71076239 (+) |
| G82111 | LOC106577091 | other | downstream | 6105123 | 73551616 ~ 73571737 (+) |
| G83836 | NA | other | downstream | 7462732 | 74909225 ~ 74909806 (+) |
