aifm2 (amid)


Basic Information

Item Value
gene id aifm2
gene name amid
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 67499187 ~ 67506681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567740.2
tagcgacttttaggacagccaatagctactttccttactgaggcgTTGACAACACTGAGAGAAGACGGGAAACCACGCTGGAAAGTAAGGACGACGAAGCGGTTGTAGCCTACATTTTGCCTACAGACAATGGGCAGCCAGGTATCTGTAGACAATGTTCATGTTGTGGTGGTTGGCGGGGGTTTCGGTGGCACTGCCGCCGCACAACAGCTCAAATCCAGGGGGATACCATTCACCCTCATTGACCTCCGTGACGCCTTTCATCACAATGTGGCTGCCCTCCGTGCCGCTGTTCAGAGTGGCTTTGCCCAGCAGACCTTCATCCCATATTTGAAGACGTTTGGAGAGAATTTCCTTCAGGGTCGAGTCATATGGGTGGACCCAGTGTCACAGACTGTAGCGTTGGATGGAGGaaagGAAGTTCATTACTCACACCTTATACTGTGCACTGGCACAGACGGCCCTTTCCCGGGGAAGTACAACATGGTGGCCTCCTATCAGACAGCCATCCAGAAGTATGAGGACATTGTGAAGGAGGTCCAGGCCGCAGGTTCGGTTCTTGTGGTAGGTGGGGGATCCACTGGTGTAGAGATGGCTGCAGAGATCAAAACAGAATATCCAGACAAGAAGGTGATCCTGATCCATTCCCGTGTTGGCCTAGCCGACCCAGAGCTGCTGCCCAGTGTCAGGCAACAGGCTAAGGAGGTGCTGCTGGAGAAAGGGGTGGAGCTGCTACTGGATGGATGCCTAGCAGAGAATGGGTCCCTGAAAGTGAATGTGCACCTGCAGGTGGAGGGCTATGACAATGTGTACGCTGTTGGGGACTGTGCTAATGTTAACGAGCCTAAGATGGCATACCATGCAGGTCTCCATGCTGGGGTTGCTGTTGCCAACATCACCAACAGTCTGATGGGGAAGCACCTGGAATCTTATCACCCAGGGAGTGTGACCATGTTGTTAGCCATGGGCCATAATGATGGAGTGGGCCAGTTCAATGGGCTGAGGCTTCCCCGTTGCCTTGTAACCCAGGGCAAGAGCAAGAACCTACTGCTGTGGAAAAGCTGGAAGGAAATGGGTCAGAAAGCTCCTTAATTAACGTGTGCCATACAGAACATTGTGGAGCGAAGACGTGTGTGTGCCAGCACCGCCTTGAGAGTGCCTTACTCAGGTGACAGCTTGCAGAAGTTTTGGCGTTCTGACATGACTATTGATATGAGACCATATATTTGTAAAATATTTCTACGCAAGGTAATGCAAACTTTGTACAATGTCCATTTTTGCCAATGAATGTTAATGTATGTcttgataaaaaatatatatatatatgacttaTGGTTAAa
>NM_001165245.1
GACGAAGCGGTTGTAGCCTACATTTTGCCTACAGACAATGGGCAGCCAGGTATCTGTAGACAATGTTCATGTTGTGGTGGTTGGCGGGGGTTTCGGTGGCACTGCCGCCGCACAACAGCTCAAATCCAGGGGGATACCATTCACCCTCATTGACCTCCGTGACGCCTTTCATCACAATGTGGCTGCCCTCCGTGCCGCTGTTCAGAGTGGCTTTGCCCAGCAGACCTTCATCCCATATTTGAAGACGTTTGGAGAGAATTTCCTTCAGGGTCGAGTCATATGGGTGGACCCAGTGTCACAGACTGTAGCGTTGGATGGAGGaaagGAAGTTCATTACTCACACCTTATACTGTGCACTGGCACAGACGGCCCTTTCCCGGGGAAGTACAACATGGTGGCCTCCTATCAGACAGCCATCCAGAAGTATGAGGACATTGTGAAGGAGGTCCAGGCCGCAGGTTCGGTTCTTGTGGTAGGTGGGGGATCCACTGGTGTAGAGATGGCTGCAGAGATCAAAACAGAATATCCAGACAAGAAGGTGATCCTGATCCATTCCCGTGTTGGCCTAGCCGACCCAGAGCTGCTGCCCAGTGTCAGGCAACAGGCTAAGGAGGTGCTGCTGGAGAAAGGGGTGGAGCTGCTACTGGGGCAGAAAGTTTCTAACCTGTCTGTACTGGAGCTCAATGTGACCAACAAGAACATGGTTATCATGACAGACAAGGATACCGAGATCACTGCAGACCTCGTCATCTGCTGCACAGGCATGAAGATTAACTCTGATGCCTATAGCTCCACCCTGAATGGATGCCTAGCAGAGAATGGGTCCCTGAAAGTGAATGTGCACCTGCAGGTGGAGGGCTATGACAATGTGTACGCTGTTGGGGACTGTGCTAATGTTAACGAGCCTAAGATGGCATACCATGCAGGTCTCCATGCTGGGGTTGCTGTTGCCAACATCACCAACAGTCTGATGGGGAAGCACCTGGAATCTTATCACCCAGGGAGTGTGACCATGTTGTTAGCCATGGGCCATAATGATGGAGTGGGCCAGTTCAATGGGCTGAGGCTTCCCCGTTGCCTTGTAACCCAGGGCAAGAGCAAGAACCTACTGCTGTGGAAAAGCTGGAAGGAAATGGGTCAGAAAGCTCCTTAATTAACGTGTGCCATACAGAACATTGTGGAGCGAAGACGTGTGTGTGCCAGCACCGCCTTGAGAGTGCCTTACTCAGGTGACAGCTTGCAGAAGTTTTGGCGTTCTGACATGACTATTGATATGAGACCATATATTTGTAAAATATTTCTACGCAAGGTAATGCAAACTTTGTACAATGTCCATTTTTGCCAATGAATGTTAATGTATGTcttgataaaaaatatatatatatatgacttaTGGTTAAatatatttctgtaattt

Function

symbol description
amid N-acetylmuramoyl-L-alanine amidase

NR:

description
unnamed protein product

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function

KEGG:

id description
K22745 AIFM2; apoptosis-inducing factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567740.2 False 1340 mRNA 0.50 8 67499187 67506665
NM_001165245.1 True 1417 mRNA 0.49 9 67499279 67506681

Neighbor

gene id symbol gene type direction distance location
gins1 gins1 coding upstream 52694 67443706 ~ 67446493 (+)
pygb pygb coding upstream 85902 67388041 ~ 67413285 (+)
LOC110532586 NA coding upstream 112180 67356070 ~ 67387886 (+)
cytf cytf coding upstream 271800 67223308 ~ 67227387 (+)
LOC110527498 syndig1 coding upstream 304461 67143452 ~ 67194726 (+)
psda LOC106576711 coding downstream 21930 67528611 ~ 67575049 (+)
glud1 gdh01 coding downstream 89996 67596677 ~ 67638420 (+)
mmrn2a mmrn2 coding downstream 199110 67705791 ~ 67724360 (+)
LOC118965297 NA coding downstream 609447 68116128 ~ 68117384 (+)
LOC110527784 LOC106576702 coding downstream 621184 68127865 ~ 68140839 (+)
G74778 LOC106581475 non-coding upstream 120263 67378576 ~ 67378924 (+)
G74776 NA non-coding upstream 121260 67377673 ~ 67377927 (+)
G74773 NA non-coding upstream 128231 67370715 ~ 67370956 (+)
G74772 NA non-coding upstream 129263 67369698 ~ 67369924 (+)
G74852 NA non-coding downstream 5748 67512429 ~ 67512806 (+)
G74851 NA non-coding downstream 7170 67513851 ~ 67514529 (+)
G74814 NA non-coding downstream 69977 67576658 ~ 67576949 (+)
G74799 NA non-coding downstream 79687 67586368 ~ 67586598 (+)
G74875 NA non-coding downstream 83555 67590236 ~ 67590560 (+)
G74139 NA other upstream 714218 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 740203 66756207 ~ 66758984 (+)
LOC118965274 LOC106576739 other upstream 1075106 66417495 ~ 66424081 (+)
G73515 NA other upstream 1210718 66287679 ~ 66288469 (+)
LOC110527164 LOC106576754 other upstream 1576902 65915581 ~ 65922285 (+)
G75747 NA other downstream 867824 68374505 ~ 68374929 (+)
G78121 NA other downstream 3064984 70571665 ~ 70654961 (+)
ccdc85a ccdc85a other downstream 3529789 71036440 ~ 71076239 (+)
G82111 LOC106577091 other downstream 6044935 73551616 ~ 73571737 (+)
G83836 NA other downstream 7402544 74909225 ~ 74909806 (+)

Expression


Co-expression Network