Item | Value |
---|---|
gene id | psda |
gene name | LOC106576711 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048565.1 |
NCBI id | CM023219.2 |
chromosome length | 95772356 |
location | 67528611 ~ 67575049 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PH and SEC7 domain-containing protein 1-like isoform X2 |
id | description |
---|---|
K12494 | PSD; PH and SEC7 domain-containing protein |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021609014.2 | False | 8119 | mRNA | 0.52 | 17 | 67528611 | 67575049 |
XM_021609023.2 | False | 8442 | mRNA | 0.52 | 18 | 67528611 | 67575049 |
XM_021609030.2 | True | 4919 | mRNA | 0.48 | 13 | 67552536 | 67575049 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
aifm2 | amid | coding | upstream | 21930 | 67499187 ~ 67506681 (+) |
gins1 | gins1 | coding | upstream | 82118 | 67443706 ~ 67446493 (+) |
pygb | pygb | coding | upstream | 115326 | 67388041 ~ 67413285 (+) |
LOC110532586 | NA | coding | upstream | 141604 | 67356070 ~ 67387886 (+) |
cytf | cytf | coding | upstream | 301224 | 67223308 ~ 67227387 (+) |
glud1 | gdh01 | coding | downstream | 21628 | 67596677 ~ 67638420 (+) |
mmrn2a | mmrn2 | coding | downstream | 130742 | 67705791 ~ 67724360 (+) |
LOC118965297 | NA | coding | downstream | 541079 | 68116128 ~ 68117384 (+) |
LOC110527784 | LOC106576702 | coding | downstream | 552816 | 68127865 ~ 68140839 (+) |
slc2a15a | LOC106576697 | coding | downstream | 700330 | 68275379 ~ 68295406 (+) |
G74851 | NA | non-coding | upstream | 14082 | 67513851 ~ 67514529 (+) |
G74852 | NA | non-coding | upstream | 15805 | 67512429 ~ 67512806 (+) |
G74778 | LOC106581475 | non-coding | upstream | 149687 | 67378576 ~ 67378924 (+) |
G74776 | NA | non-coding | upstream | 150684 | 67377673 ~ 67377927 (+) |
G74814 | NA | non-coding | downstream | 1609 | 67576658 ~ 67576949 (+) |
G74799 | NA | non-coding | downstream | 11319 | 67586368 ~ 67586598 (+) |
G74875 | NA | non-coding | downstream | 15187 | 67590236 ~ 67590560 (+) |
G74879 | NA | non-coding | downstream | 20474 | 67595523 ~ 67595887 (+) |
G74880 | NA | non-coding | downstream | 21320 | 67596369 ~ 67596592 (+) |
G74139 | NA | other | upstream | 743642 | 66784335 ~ 66784969 (+) |
G74067 | LOC106576735 | other | upstream | 769627 | 66756207 ~ 66758984 (+) |
LOC118965274 | LOC106576739 | other | upstream | 1104530 | 66417495 ~ 66424081 (+) |
G73515 | NA | other | upstream | 1240142 | 66287679 ~ 66288469 (+) |
LOC110527164 | LOC106576754 | other | upstream | 1606326 | 65915581 ~ 65922285 (+) |
G75747 | NA | other | downstream | 799456 | 68374505 ~ 68374929 (+) |
G78121 | NA | other | downstream | 2996616 | 70571665 ~ 70654961 (+) |
ccdc85a | ccdc85a | other | downstream | 3461421 | 71036440 ~ 71076239 (+) |
G82111 | LOC106577091 | other | downstream | 5976567 | 73551616 ~ 73571737 (+) |
G83836 | NA | other | downstream | 7334176 | 74909225 ~ 74909806 (+) |