Gene
RNA
| Item | Value |
|---|---|
| gene id | glud1 |
| gene name | gdh01 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 67596677 ~ 67638420 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| glutamate dehydrogenase 1, mitochondrial |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0006520 | cellular amino acid metabolic process | biological_process |
| GO:0016639 | oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | molecular_function |
| id | description |
|---|---|
| K00261 | GLUD1_2, gdhA; glutamate dehydrogenase (NAD(P)+) |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037742.1 | False | 3179 | mRNA | 0.46 | 14 | 67596677 | 67638420 |
| NM_001172529.1 | True | 1890 | mRNA | 0.52 | 13 | 67596711 | 67637115 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| psda | LOC106576711 | coding | upstream | 21628 | 67528611 ~ 67575049 (+) |
| aifm2 | amid | coding | upstream | 89996 | 67499187 ~ 67506681 (+) |
| gins1 | gins1 | coding | upstream | 150184 | 67443706 ~ 67446493 (+) |
| pygb | pygb | coding | upstream | 183392 | 67388041 ~ 67413285 (+) |
| LOC110532586 | NA | coding | upstream | 209670 | 67356070 ~ 67387886 (+) |
| mmrn2a | mmrn2 | coding | downstream | 67371 | 67705791 ~ 67724360 (+) |
| LOC118965297 | NA | coding | downstream | 477708 | 68116128 ~ 68117384 (+) |
| LOC110527784 | LOC106576702 | coding | downstream | 489445 | 68127865 ~ 68140839 (+) |
| slc2a15a | LOC106576697 | coding | downstream | 636959 | 68275379 ~ 68295406 (+) |
| fgf8a | LOC106576696 | coding | downstream | 677912 | 68316332 ~ 68322937 (+) |
| G74880 | NA | non-coding | upstream | 85 | 67596369 ~ 67596592 (+) |
| G74879 | NA | non-coding | upstream | 790 | 67595523 ~ 67595887 (+) |
| G74875 | NA | non-coding | upstream | 6117 | 67590236 ~ 67590560 (+) |
| G74799 | NA | non-coding | upstream | 10079 | 67586368 ~ 67586598 (+) |
| G74814 | NA | non-coding | upstream | 19728 | 67576658 ~ 67576949 (+) |
| G74790 | NA | non-coding | downstream | 31251 | 67669671 ~ 67671554 (+) |
| G74945 | NA | non-coding | downstream | 61549 | 67699969 ~ 67702937 (+) |
| G74956 | NA | non-coding | downstream | 155361 | 67793781 ~ 67795363 (+) |
| G75004 | NA | non-coding | downstream | 161755 | 67800175 ~ 67800581 (+) |
| G75034 | NA | non-coding | downstream | 225151 | 67863571 ~ 67871124 (+) |
| G74139 | NA | other | upstream | 811708 | 66784335 ~ 66784969 (+) |
| G74067 | LOC106576735 | other | upstream | 837693 | 66756207 ~ 66758984 (+) |
| LOC118965274 | LOC106576739 | other | upstream | 1172596 | 66417495 ~ 66424081 (+) |
| G73515 | NA | other | upstream | 1308208 | 66287679 ~ 66288469 (+) |
| LOC110527164 | LOC106576754 | other | upstream | 1674392 | 65915581 ~ 65922285 (+) |
| G75747 | NA | other | downstream | 736085 | 68374505 ~ 68374929 (+) |
| G78121 | NA | other | downstream | 2933245 | 70571665 ~ 70654961 (+) |
| ccdc85a | ccdc85a | other | downstream | 3398050 | 71036440 ~ 71076239 (+) |
| G82111 | LOC106577091 | other | downstream | 5913196 | 73551616 ~ 73571737 (+) |
| G83836 | NA | other | downstream | 7270805 | 74909225 ~ 74909806 (+) |
