XLOC_019793


Basic Information

Item Value
gene id XLOC_019793
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 39328103 ~ 39337096 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039686
GTGGTACTGGAGTCTGAGAGTCTGAGCAAGGCAGAAGCTTAAGGGGCACTGAAGAATCTGTGCTAGGCTGAATGTAAAAAGCATTGGAATGTCTGTGCTATTGAAGAAACCGAATGGCACTGGAGAGGCAGTGCTTGGCTGTGCTAGAGGGGCACTAGAAAGTCTGCACTTGGCAGCACAGTGGGGGCACTGCAAAGTCTGTGACTGAAGAAACAGGAGGAGCACTGGAGAGTCTGTGCTATGGGAGAACTAGAGAGCATGTGCTAGGTAGAACCAGCAGGGGCGAATCTATGGGAGAACTAGAGCAGGCACTGAAGAGTCTGGAATAGGTAGAACCATTGGGTGGATTGGTCTGTGCTATGGGAGAATTGGTGGGGGAACTGGAGAGTCTCCGCTAGGCAGAACCAGAAGGGGCAATGAAGAGTCATTGCTCGGCAGAACCAGGAGAGGCACTGGAGAGTCTGTGCTATGGGAAAACAATAAGGGGCACTAGAGAGTCTGTGCTAGGCAGAACCAGAAGAGGCACAGAGGAATCTGTGCTAGGCAGAACAAAAGGGGCACTGGAAAGTCTGTGCTATAGGAAAACCAGAGGGTACACTGGGGAATCTGTGCTATAGCAGAACTATAGAAGGCACTAAAAATTCTGTGATAGGCAGCACCTGCGCGGGCACCAGAGATTCTGAGCTAGGCAGAACCTGAATGAGCATGGGAGAGTCTGTGCTATGAGACTAGTTGGGGCTTTAGAGAGTATGCGCTAGGCAGAACCAGGAGAACCACTAAAGAGGCTGTGCTGGGCAGAATGAGAGGGGCACTGAAAAGTCTGTGCCATGAGAAAACCAGAGGTGAAACTCAACTAGGGACAACCAGCGTTGGTACTAAAGAGTAGGAGCTATGCAGAACCAGCAGGGGCTATGGAGAGCCTAAGCTTGACAAAACCAGAGGGAGCTCTTGAAAACATGTGCTAGGGAGAACCAGTGGTGTTACTGGAGAGAATTTTTCTGTGCTCTCCAAAACCTGGAAGGCACTGGAGAGTCAGAACTTATTAGAACCAGCAGAAGCACTAAAAAGTCAGagctttatgttttatgtttcatttatgtTCATTTGAGTATCATTATTAAGTTTCATTTAAGTATCAGTAGGCTATTTTTTATACTTTCGCCCAGCTCTACTGGTTCTCTGCTTTAGTCAAAATCATTTACAAAGTTGCAAAGTTCAGTGTTTAATCATATCCATATATCCATATGTTCTGACTAACCAAAACCAGGATGTGTAACTCATATGCACAGGTAAGTGTACAATGCACGGTTTAAACAAGCAAACATTTGTCTACTTGCACTGaccatttcattaatttaaatcaGAATGtgccatttaaataaaaactcaatattattaaAAGAAAGCTTATTtgcaaaatgaaaaaacaaatttgcttaaataaaattatgattttaaactttattttagtattattgttaGCATTGTATTGCtattattgtaaagaaaataaatcattttaactaTTGGACATTGGAGGCAGCACCAGAGGGGGTACTGGTGAGTCAAAGCTAGGCAGAACCAGGGTGGCACTGGAAAGTCTGTGCCGGGTAGGACCAGCTGGGAAATTAGAGGGTCTGTACTAGGCGGCACCAGTGGGTACTGGAGGCTCTGTGATAGGCAGAACCAACTGGGGCATTGGAAGGTCTGTGCTGATTAACCCCAGAGGGGCACTATACTGCTGGCAGAACTGGAGGGGAGAGGGGTTGGCATTGTGTGGGGTACTAGAGAGTCTGTGCTAGGCAGAACTAGGAGGGGCACTGGAGACTGGAGAGTCTGTTCTATGGGAGAATTAGAGGGACACTAGACAGTCTGTGCTAGGCAAAACCAGGAAAGGCAGTGGAGAGTCTGTGCTATGGGAGAATTAGAGGGAGACTGGCAGATCCAGCAGAGGGGTACTAGAGAGCCTGTACTGGGCGGAACTAAAAGGGCCACTGGAGAATCTGTTTTATGGGTGAATTAGAGGGACACTGGAGAGACTGTGCTAGGCAGAACCATGAGAGGCACTGGTGAGCCTGTGCTTTGGGAAAACTGTAAGGCACACTAGAGAGTCTGTGATAGGCAGAACCAGAAGAGGCACAGAAGAGTTTGTTCTAGGCAAAACGAAAGGGGCACTGGAAAGTCTGTGCTATGAGAGAACCAGAGAAAGCACTAGAGAGTCTGTGCTAGGCAGAACCAGCGGGGGCATTTGAGGGTTTGTGCAAGGCAGCACAGTGGAGAAACTCGAGAGTCTGTGATAGGCAGAACCAGAAGGGGCACTTGAGAGCCTATGTTAATGCAAACTTGAAGGTGACACTAGAGAGTCTGTGCTAGGCAGAACCAGGAGAGACACTGTAGATTCTGTGCTAGACAGAATAAGAGGGGCACTGGAAATACTGTGCTATGAAAGAACTAGAGCTGCACTGGAGAGAGGGTGTGCTAGGCAGAACCAGGAGGGGCACTGGAGAGTCTTAGGCATAACCAAAGTGCACACTTGAGAGTATGTTCTAGGCAGAACCAGAGAGGGCACTGAAGATTCTGAGATAGGCAGAACCAGTGGGAATACTAAAAAGTCAGAGCTAAGCAGAACATAGAGGTGTACTGGTGAGTCTGTGCTAGCAAGAACCAGGAAGGCCAATGGAGAGTCTGTGCTATGAGAGAACTAGAGGGGGCACTGAAGATTCTGTGAGAGGCAGAAAAAGCAGTAGCACTGGAGACACTGTGCTAGGCAGAGCCAGAGGGGAAAGTTTGTGCTCGACAAAACCAGAGGGGGCATTGGAGAGTCTGTGCTAGGGAAAACCAGAGGTGGCACTGGAGTCTGACCAATTTCTGACTATAAGGAAAGTAGATTAATTTCTTTGTGAGATTAGGCTGAGTTATATCACTCATTAAACCAAATAATTATGCTCTTTACTTGCTGCTCCACAAACAGCGATATTTGAACCATTTATAAATGATGAATCACTGTCTGATATCTGACAATCTAAGATCAGACATAGATATAAACTTTAAGTGTATTACAGTACACTGCAAAAGTGTATTTCTTCTTGCCGTTTATTAATAACTTTGACATCCCAGAATTAGCAAGCATGATCAGCTTAAAGGGTCAGTTTACcccgaaaatgaaaattctataaaCATATCACATTATCAAAAGacgacgaggcagtggcgcagtaggtagtgctgtcacctcacagcaag
>TCONS_00039687
CTACATTCTCTGTTTTGTGTGGACTTATACAACCATATGTAATTAGTTTTTCTTAAAAGCATTTGTAAATGCTGCTTTCAAATAAACTATATTACATTCTATTTCTGTTATACTGTGCAAAGAGAAATACTTTcgccattttaaaaacaaacaacagtacTTCAGAAGGCTCGGAATAATTTTCTGGGCTTTAAAATGGCTCATCCCCCTACTTCAGCATCAGGAGACTCCAGTTAAGAATGAGCATTATGTCATTGTTTCATCCGGGATATTCTCTCATCCAGGAAATGCGTAAGGTTGACAGGCGAATGTAAACACGCAATATATGGTTTTGAGCCAAACAAATGTTGGCAAACAACGTCTTTTTCTTGACAGAAAGCACAAAATCTTGCTGTCGATGTCTTAATGATGCTGTATCTTTATGGCACGATGACAACAAAACTAACCGACGCGTATTGATCTTTGGAATGTGTCGTCAAATAACGATTATCTAAATGAATACGACACTCTAAATATTGACAGATGCATCTACTGAATGCTATTAAAACGATATATTATCGGTTATGTTTTCCACACAAGCGCTGCtttaattctgactttttaaagCACACATCCTATCTGTATCGTGTTGAAATCAGTGCGCCgcgttttaaggtcaataatctCAATGACATAAACATGCCGATATTACCTCATGCTTCTCAGAGCTACTTACGATGGGCAGATGAATGATGCAGGACACATCCAGTGCAAAGCATCGCCACCAAATCTCTGCGTCAGGGACAcgaaaggGTGGAACCAGGAGAGGCACTGAAGAGCCTGTGCTAGGCCGAACCAGGAGAGGCACTGGGGAGTCTGTGCTGGCAGAACCGGCGGGGGCATTGGAGGGTCTGTGCTGGCAGACCCAGAAAGGCACTGGAGAGCTTATGTTATGGGAGAACCATATGAGACATTGGAAAATCTGTGCTTTAGCAGAACTGAAGATTTTGTGCTAGGCAGAACCAGGATGGCACTGGAGAGTATGTGCTATGGGACAACTAAAGGGGGCATTAGAGAGTCTGTACTAGGCAGAACCAGGAAAGGCACTGACGAGTCTGCGCTAGGCAGAATGAGAGGGGTACTGGAAAGTCTGCCCTATGAGTGAACCAGAGGGCCACTAGAGAGTCTATGCTAGGCAGAACCAGCTGGAGAGTCAAAGCTAGGGAGAACAAGAAGGGGTACTAAAGAGTAGGAGCTAAGCAGAACCAGCAGGGACACCAGAGACTATGCAAAGTGCTGGGCAAAAAAGATAAAAAGCACTAGAGATTCAGTTCTAGGTAGAACAAGAGAGTGCACTGGAGATTCTGAGCAAGGTAGATGCTTCAGAGGCACTGAAGAGTCTGTGCTAGGCAGAACTAGTAGGGCACAGGAACGTTTGTACTGTGAAAGAAACAGAGGGGCATTGGAAAGGCTGTGCTAGGCAGAGCCAGGGGGCACTAGAGAGTCTGTGCTAGGCAGCACTAGAGGTGGCACTAGAGAGTCTGTGCTAGGCAGCACAGTGGGGGCACTGGATAGTATGTGATAGGCAGAACCAGCAGAGGCACTGGAGAGTTTATTCTAAGGGAGAACTAGATGGGACACTGGGTAATCTGTGCTGTAGCAGAACTGAAGATTCTGTGCTAGGCAGCACCTGCAGGGGCACTAGAGAGTCTGTGCTGGGCAGAACCAGGAGGGTTGTAGAGAGTCCGTGCTATGGGAGAACTATAAAGAGCATTATAGTGTCTGTGCTAGACTGAACGAGGAGAGGCACTCATGATTTTGTGCTAGGCAGAACAAGAGGGGAGAGTGTGAAGAAACTAACAAAACCAACAAGGGCACTTGAGAGTCTAAGCTTTGCAGAACTAAAGGGGACACTAGAAATTCTGTGCTAGGGAGAACCAGTGGTGGTACTGGAGTCTGAGAGTCTGAGCAAGGCAGAAGCTTAAGGGGCACTGAAGAATCTGTGCTAGGCTGAATGTAAAAAGCATTGGAATGTCTGTGCTATTGAAGAAACCGAATGGCACTGGAGAGGCAGTGCTTGGCTGTGCTAGAGGGGCACTAGAAAGTCTGCACTTGGCAGCACAGTGGGGGCACTGCAAAGTCTGTGACTGAAGAAACAGGAGGAGCACTGGAGAGTCTGTGCTATGGGAGAACTAGAGAGCATGTGCTAGGTAGAACCAGCAGGGGCGAATCTATGGGAGAACTAGAGCAGGCACTGAAGAGTCTGGAATAGGTAGAACCATTGGGTGGATTGGTCTGTGCTATGGGAGAATTGGTGGGGGAACTGGAGAGTCTCCGCTAGGCAGAACCAGAAGGGGCAATGAAGAGTCATTGCTCGGCAGAACCAGAGAGGGCACTGCAGTCTGAGCTAGGCAGAACCAGAAGGGGCACTGAATAGTCTATTTTTTGCAAAACCAGGGTGGCACTCAAGAGTCTGTGCCAGGGAGAACCATCTGGAAAATTAGAGGGTCTGTACCAGGCAGCACCAGCGGGTACTGGAGACTCTGTGATAGGCCGAACCAATGGGGTCATTGGAGGGTCTGTGATATGGGAAGCTAGAGAGGGCACTGAAGGTTCTGTGCTAAGTAGCACCTGTAGGGGGACTAGGGAGTATGTGCTAGGCAGAACCAGGAGAGGCACTGGAGAGTCTGTGCTATGGGAAAACAATAAGGGGCACTAGAGAGTCTGTGCTAGGCAGAACCAGAAGAGGCACAGAGGAATCTGTGCTAGGCAGAACAAAAGGGGCACTGGAAAGTCTGTGCTATAGGAAAACCAGAGGGTACACTGGGGAATCTGTGCTATAGCAGAACTATAGAAGGCACTAAAAATTCTGTGATAGGCAGCACCTGCGCGGGCACCAGAGATTCTGAGCTAGGCAGAACCTGAATGAGCATGGGAGAGTCTGTGCTATGAGACTAGTTGGGGCTTTAGAGAGTATGCGCTAGGCAGAACCAGGAGAACCACTAAAGAGGCTGTGCTGGGCAGAATGAGAGGGGCACTGAAAAGTCTGTGCCATGAGAAAACCAGAGGTGAAACTCAACTAGGGACAACCAGCGTTGGTACTAAAGAGTAGGAGCTATGCAGAACCAGCAGGGGCTATGGAGAGCCTAAGCTTGACAAAACCAGAGGGAGCTCTTGAAAACATGTGCTAGGGAGAACCAGTGGTGTTACTGGAGAGAATTTTTCTGTGCTCTCCAAAACCTGGAAGGCACTGGAGAGTCAGAACTTATTAGAACCAGCAGAAGCACTAAAAAGTCAGagctttatgttttatgtttcatttatgtTCATTTGAGTATCATTATTAAGTTTCATTTAAGTATCAGTAGGCTATTTTTTATACTTTCGCCCAGCTCTACTGGTTCTCTGCTTTAGTCAAAATCATTTACAAAGTTGCAAAGTTCAGTGTTTAATCATATCCATATATCCATATGTTCTGACTAACCAAAACCAGGATGTGTAACTCATATGCACAGGTAAGTGTACAATGCACGGTTTAAACAAGCAAACATTTGTCTACTTGCACTGaccatttcattaatttaaatcaGAATGtgccatttaaataaaaactcaatattattaaAAGAAAGCTTATTtgcaaaatgaaaaaacaaatttgcttaaataaaattatgattttaaactttattttagtattattgttaGCATTGTATTGCtattattgtaaagaaaataaatcattttaactaTTGGACATTGGAGGCAGCACCAGAGGGGGTACTGGTGAGTCAAAGCTAGGCAGAACCAGGGTGGCACTGGAAAGTCTGTGCCGGGTAGGACCAGCTGGGAAATTAGAGGGTCTGTACTAGGCGGCACCAGTGGGTACTGGAGGCTCTGTGATAGGCAGAACCAACTGGGGCATTGGAAGGTCTGTGCTGATTAACCCCAGAGGGGCACTATACTGCTGGCAGAACTGGAGGGGAGAGGGGTTGGCATTGTGTGGGGTACTAGAGAGTCTGTGCTAGGCAGAACTAGGAGGGGCACTGGAGACTGGAGAGTCTGTTCTATGGGAGAATTAGAGGGACACTAGACAGTCTGTGCTAGGCAAAACCAGGAAAGGCAGTGGAGAGTCTGTGCTATGGGAGAATTAGAGGGAGACTGGCAGATCCAGCAGAGGGGTACTAGAGAGCCTGTACTGGGCGGAACTAAAAGGGCCACTGGAGAATCTGTTTTATGGGTGAATTAGAGGGACACTGGAGAGACTGTGCTAGGCAGAACCATGAGAGGCACTGGTGAGCCTGTGCTTTGGGAAAACTGTAAGGCACACTAGAGAGTCTGTGATAGGCAGAACCAGAAGAGGCACAGAAGAGTTTGTTCTAGGCAAAACGAAAGGGGCACTGGAAAGTCTGTGCTATGAGAGAACCAGAGAAAGCACTAGAGAGTCTGTGCTAGGCAGAACCAGCGGGGGCATTTGAGGGTTTGTGCAAGGCAGCACAGTGGAGAAACTCGAGAGTCTGTGATAGGCAGAACCAGAAGGGGCACTTGAGAGCCTATGTTAATGCAAACTTGAAGGTGACACTAGAGAGTCTGTGCTAGGCAGAACCAGGAGAGACACTGTAGATTCTGTGCTAGACAGAATAAGAGGGGCACTGGAAATACTGTGCTATGAAAGAACTAGAGCTGCACTGGAGAGAGGGTGTGCTAGGCAGAACCAGGAGGGGCACTGGAGAGTCTTAGGCATAACCAAAGTGCACACTTGAGAGTATGTTCTAGGCAGAACCAGAGAGGGCACTGAAGATTCTGAGATAGGCAGAACCAGTGGGAATACTAAAAAGTCAGAGCTAAGCAGAACATAGAGGTGTACTGGTGAGTCTGTGCTAGCAAGAACCAGGAAGGCCAATGGAGAGTCTGTGCTATGAGAGAACTAGAGGGGGCACTGAAGATTCTGTGAGAGGCAGAAAAAGCAGTAGCACTGGAGACACTGTGCTAGGCAGAGCCAGAGGGGAAAGTTTGTGCTCGACAAAACCAGAGGGGGCATTGGAGAGTCTGTGCTAGGGAAAACCAGAGGTGGCACTGGAGTCTGACCAATTTCTGACTATAAGGAAAGTAGATTAATTTCTTTGTGAGATTAGGCTGAGTTATATCACTCATTAAACCAAATAATTATGCTCTTTACTTGCTGCTCCACAAACAGCGATATTTGAACCATTTATAAATGATGAATCACTGTCTGATATCTGACAATCTAAGATCAGACATAGATATAAACTTTAAGTGTATTACAGTACACTGCAAAAGTGTATTTCTTCTTGCCGTTTATTAATAACTTTGACATCCCAGAATTAGCAAGCATGATCAGCTTAAAGGGTCAGTTTACcccgaaaatgaaaattctataaaCATATCACATTATCAAAAGacgacgaggcagtggcgcagtaggtagtgctgtcacctcacagcaag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039686 False 3243 lncRNA 0.46 2 39328103 39331628
TCONS_00039687 True 5448 lncRNA 0.46 2 39328103 39337096

Neighbor

gene id symbol gene type direction distance location
XLOC_019792 aifm5 coding downstream 880 39302793 ~ 39327223 (-)
XLOC_019791 CU442763.1 coding downstream 60797 39267225 ~ 39267306 (-)
XLOC_019790 trarg1b coding downstream 74456 39240897 ~ 39253647 (-)
XLOC_019789 unc119b coding downstream 150539 39121453 ~ 39177564 (-)
XLOC_019788 vtnb coding downstream 246996 39067512 ~ 39081107 (-)
XLOC_019794 NA coding upstream 22055 39359151 ~ 39362176 (-)
XLOC_019795 sept4a coding upstream 175341 39512437 ~ 39546737 (-)
XLOC_019796 dynll2b coding upstream 220337 39557433 ~ 39566854 (-)
XLOC_019797 srsf1b coding upstream 230409 39567505 ~ 39577517 (-)
XLOC_019798 pigs coding upstream 246362 39583458 ~ 39604628 (-)
XLOC_019782 NA non-coding downstream 695196 38629308 ~ 38632907 (-)
XLOC_019779 NA non-coding downstream 864957 38457283 ~ 38463146 (-)
XLOC_019777 BX530030.1 non-coding downstream 1264789 38063197 ~ 38063314 (-)
XLOC_019769 NA non-coding downstream 1695395 37594351 ~ 37632708 (-)
XLOC_019801 NA non-coding upstream 568807 39905903 ~ 39912107 (-)
XLOC_019802 NA non-coding upstream 586674 39923770 ~ 39924444 (-)
XLOC_019814 NA non-coding upstream 1191691 40528787 ~ 40579807 (-)
XLOC_019825 CU570984.1 non-coding upstream 1914335 41251431 ~ 41251548 (-)

Expression


Co-expression Network