XLOC_019794


Basic Information

Item Value
gene id XLOC_019794
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 39359151 ~ 39362176 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039688
AGTCTGATCCTCTTTTCTTTCTACCTGGGTCACAGCGAGGGTTGTCTGCTCAGAGTGCTGCAGTGATAACCCTGAGCTCTGCTTTAGCACTTCCAAATCCCACTGCGTCTGTTCTACTTCCTTATTCCAAACAAAACCCTGGTCTATCTGTGAAGGGCTTTGCTTCATCTCCCCAAACTCTTGCTCCTCCAGCCCAGAGCTCATGTCAGCAATGTCTGGTTGCTCTACAAGAGACGTTTCCTTCTCAGTAGCATGCTCGTGTTTAATAATTCGCATCTCTAGTATCTCAGAAGCCTGTGCATCTATTTTGAAGTCTAGTTTTTCATCAGGTTGTGCTGTGAGTTCTGAAGTTTGTGCTTCCCTTTGCGACTTTTGAAGCAAAGGCCATTCAGTTGGAATGCCATAAGCAGGTTGCATCTTTATCGCATCTAGATGTGCTTGTGCTGCACTGTTTGGACCACTTTCGTTTAGTTTCTTTTTGTCCTGTTTCTTCTCGGCGTGTAATTGCTCCTTTGGGGTTTTGAGTTCATTGTACTGCTCTGTTTGAGTCGTGCCATCTTCTCTCTGACTGATGTCAAAATCGCATTTTGAGACATCTAGTGAAGATGCAGCAAACATGGAAGAAACGTCTGTCCCATGAGCAAAGACAGGTTTACAAGTGTCTGCTTCTAATCCATGGGTGCATATTCGGTTTTGAGCAGCAGGTGCTTGGTAGAGGGATGACAGAAGAGGCCATTCATCCTCTATGGAGCGTGATTGATTTGTGCCTGTGATGTTTGTGCTTGGCGGCCCCACCAGCCCTCTATTTCTTTCTCCTCCATTTCGTGGATTGCTTTCATCAAATCCATCTTCTCTGCTGGCCTCTTGCCCGCTTGTTGCCAATAAGAGCTCCAAAGCCTCAGTTGAGTCTCCTCTGATGTGAAGGTTGCTGCTGAGCACAATGTCAGGAAACAAAAGGTGATCTTGGTCCAGAACTGGGGAGTCCAGCAGATCAGCTGAGGTCCTTGAAGGAGAGACACTTTCTCCATCGCTGTTTTCCTGGGATAAGAGCGCCGAGTGCTCTTCAGTCTGATCAGCAGCTCCCTTGGTGGTAATATATTCTGACACTTTACGGCAACAATAAAGTATGTTTCCCATGCTGTCTGTTTGATTGCCAAAGAGTAAAAGAGCTGTAATCTGAAAGTCCCAAAACTCAAGTACGCCCAAAATCAGCTACTAGAGCTTATTTGGATTTAAAATGAgctagaaaatgttgctttataCGTAAATCTAAAGACATGCCTGACAGATAGTTGACAGACCCAATTACCAAGTCTGGCACTTGGCCTGTGCATTTCTTAGCTGTAGATAGTAAAGACATGTGACTGTTTGCATGCCAGAATACAATTATGATTTATGCATAGATAAACTGCCTGACTGGATGAAAGTTTGTCCTATATATTAATGCACGTATATAAAACAGTTAATGGAAGATCAGAAAATTGCATAGgttaaaataaatctgatttaacgatcaaaacattttaatatatgttAAACTAGTGcattaataaatcataataaacatGCAGACATCTTCTCACAGTTTTGTACTTGTACTCCATATGCCTCAAAAATCTCTACAGAATCATAGATAGGCAGAAGAGCTCGTCCCAAGCAGGATATGTCCATGTTTTCCAACCAAACGCAACACATTTCAGTTCTAGTGTGTTCTCTAATGTCCTTCACTCGGGGTCTCGTGAACCGCTCCATCCCTCCAACACATTCAGTCCCGGGCGGAGGAGTATCGGCGGAGTTTCCTGCATCCCATCCCTCTTCCAGAGAAACCGCAACTCATTTCTTCGGTTTCATTAAAGAAAAAACACGCGTCATGACTTCTTCAGTCTATGCCAGTGCATGTTTCCCCCAGGAGTCTGCGTGTTTTCTGCGAGCTGTCCGCTTTGAATCAGCTGCTGCTGCAGTACTGGCAGAATGTGCAGGAGATGCTTTAAAAGCACACACTAGTGGGAGAAGTGCAAGGATTAGCCCACAGCACAATAAGAATAGGCTACCAAGCCAAACGAAGTAGAAAACGTTATTATTGCTGTAAGCTTGTCGAAGCTCTTCACTGCGGTCAAAACAGCAAGTCGCTGCGCTGCTTGAAAATTACGTTACAAGGAAAGCCTGAGGCGAGATGAGCGCGTATTACTGCAATTACGGTAATGACAGAAACAATTTACAGGTATTTGCATGCAAAACATGCAATCCACTGTTTTGATGTTATCTAAGGCACTACACCTTGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039688 True 2282 lncRNA 0.44 2 39359151 39362176

Neighbor

gene id symbol gene type direction distance location
XLOC_019793 NA coding downstream 22055 39328103 ~ 39337096 (-)
XLOC_019792 aifm5 coding downstream 31928 39302793 ~ 39327223 (-)
XLOC_019791 CU442763.1 coding downstream 91845 39267225 ~ 39267306 (-)
XLOC_019790 trarg1b coding downstream 105504 39240897 ~ 39253647 (-)
XLOC_019789 unc119b coding downstream 181587 39121453 ~ 39177564 (-)
XLOC_019795 sept4a coding upstream 150261 39512437 ~ 39546737 (-)
XLOC_019796 dynll2b coding upstream 195257 39557433 ~ 39566854 (-)
XLOC_019797 srsf1b coding upstream 205329 39567505 ~ 39577517 (-)
XLOC_019798 pigs coding upstream 221282 39583458 ~ 39604628 (-)
XLOC_019799 aldocb coding upstream 246461 39608637 ~ 39639954 (-)
XLOC_019782 NA non-coding downstream 726244 38629308 ~ 38632907 (-)
XLOC_019779 NA non-coding downstream 896005 38457283 ~ 38463146 (-)
XLOC_019777 BX530030.1 non-coding downstream 1295837 38063197 ~ 38063314 (-)
XLOC_019801 NA non-coding upstream 543727 39905903 ~ 39912107 (-)
XLOC_019802 NA non-coding upstream 561594 39923770 ~ 39924444 (-)
XLOC_019814 NA non-coding upstream 1166611 40528787 ~ 40579807 (-)
XLOC_019825 CU570984.1 non-coding upstream 1889255 41251431 ~ 41251548 (-)
XLOC_019828 CABZ01034722.1 non-coding upstream 1989369 41351545 ~ 41351665 (-)

Expression


Co-expression Network