hells (LOC106576686)


Basic Information

Item Value
gene id hells
gene name LOC106576686
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 68466950 ~ 68476455 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609541.2
GCCCCACCTCCTTAATTCTACAGTCAGTCATCACACAGACAGACTGTTGCTTGCTTGTGTAACTTCTTTGTATAACTTGCTATATCTAGCTAGTTCTTCCTAAAATAAATATCCCAGGGAAATAGTTTATTTTGCTACATATCTAGTTTGGAAGGTTTTCCCAATATGAGTTGCGTAAAGGAAGAAACCCGAAGCATGTCTCCTCATTGTCCAAAGCCTAACGAATCTGAAGAACCGCTGGGTACAGCTATGGAGGAGACTTTGCCTGAAAATGCTGCAAGTGTGGAAGCTGAAGCTGTAGTGTCTGCAGTTGtcatcacaaaagagatggaggaagaggagaaacaattgatggagaaaggagagaaacaaGAAGAGGAGATAATGAAAAAGGCTCGAGAAGCTCGGGAGAAGGAATCTCATGACATTCGCTTCAAGAGGCTGCAACACTTGCTGGAGAAAAGTAACATCTATTCCAAATTCCTTCTTACCAAGatggagcaacagcagcaggagGAAATGCTGAagaaagagagactgaaaaagaCACACAAGGGCACTGACAAAAAGACTGGAAGAGttgaaagaaagaaaagggagagggaggaagattaCAAAATCGCTGATGTCATGTCTAAAGAGGAAATTATGTCCAAGGCCAAGAAACCTAAAGTGGAGGATGAGGAGGTCCTTGGGAAGAAGAAGCTGGAAGCGGCGGACATTGAAAAGATGAGTGACTCAAATGCTGACATCAAGGGCCGTCTGTCGGAGGCTGTGAGAGACAATGCCAAACAACTGCTGGACCCAGACAGGAAAGTGAACGGGCAGGCCGTGCCCGCCCAGCAGCCCCTGCTCTTTACTGGGGGAGTCATGAGGTCGTACCAGATAGAGGGCGTGGAGTGGCTCAGGATGTTGTGGGAGAATGGTATTAATGGGATCCTGGCAGATGAGATGGGTCTGGGGAAGACCATCCAGTGCATCGCCCACGTGGCCATGATGCTGGAGAGAAAGGTGCTGGGACCCTTCTTGGTAGTGGCCCCCCTGTCCACTCTGCCCAACTGGATCAATGAGTTCAAGCGCTTCACtccagagGTGTCCGTACAGCTGTACCATGGGCCTGCTAAGGAGAGGATGTCGTTGTTAAAGCAGATTCGTAAGCCCCAGGGGCCTCACAACATGTGCCCTGTGGTGGTCACCTCCTTTGAGATTGCCATGATAGACAGGAAGTTTCTGCAGCGCTTCCAGTGGAAGTACCTGATCGTGGACGAGGGCCACAGGATCAAAAACCTGAACTGCCGACTGGTGAGGGAACTCAAGATGCTGCCCACGGACAACAAACTGCTCCTGACAGGCACGCCGCTGCAGAACAACCTGGCTGAGCTCTGGTCACTGCTCAACTTCCTCCTGCCTGAGGTCTTTGACGACCTCAAGAGCTTTGAGTCGTGGTTTGACATCGACACCATTGGATCGAATGCAAAACAAGTTGTGGCTAACGAACGAGAGCAGAACATCCTGCACATGCTCCACCAGATTCTGACGCCGTTCCTGCTACGACGCCTGAAGTCTGACGTGACGTTGGAGGTGCCGCCCAAGAAAGAGATTGTTGTTTACGCCCCACTCACTGCCAAACAGGAGTCTTTTTACACTGCTGTGGTCAACAAGACCATTGCCAAAATGCTGGGCCAGGAGAAGGGGGAGGCCCCAGTGGTGCTGACGACCGACGGCAGGCCTAAGCGCAGGACCAGGAGGCCTGTGGACTACAAAGAGACTGATGGTGACACGCCCTATGACCTGGAGAAATACCTGGAGAGGGTTCAGAAGGAGGCAGAGCTGAGccccGCCCCGGTGGTGGACGTGCAGATGCCCCTGGACTCCCAGATCAACCTGAAGCTGCAGAACATCCTCATGCTGCTGAAGAGGTGCTGTAACCACCCCTACCTCATAGAGTACCCACTGGACCCAGCCACTCAGGAGTTCAAGATTGACGAGCAACTGGTGCAGACCTCTGGGAAGTTCCTCATTCTGGACAGAATGCTGCCAGAGCTGAAGAGGAGGGGACACAAGGTGTTGATTTTCAGCCAGATGACGTCCATCTTGGATATCCTAATGGACTACTGCTACCTGCGTGGTTACCAGTACAGCCGACTGGACGGGACAATGGCTTATGCCGACAGAGAGGAGAACATGACAAAGTTCTCGTCTGACCCGGAGGTGTTCCTCTTCCTACTGAGCACCAGAGCAGGTGGCCTGGGCATCAACCTGACTGCTGCTGACACGGTCATCATCTTTGACAGTGACTGGAACCCCCAGGCAGACCTGCAGGCCCAGGATAGGTGCCACCGCATCGGGCAGACCAAACCCGTGGTGGTGTATCGCCTGGTCACTGCCAACACCATCGACCAGAAGATCCTGGAGAGAGCCTCAGCCAAGAGGAAACTGGAGAAGATGGTCATTCACAAGAACAAATTCAAAGGAGGAAAAGCTGAGCTCAAACAGACCAAGAGCTGTGTTGATGTGTCTGAGCTGATGGATCTTCTCAGCGCAAGAGATTACGAGAAGGAGGTGAAAAGCACCACGGGGAAGGTCATTAGTGACGAGGACCTGGAGTTTCTGCTGGACCGCAGTGACCTACTAGACAAGGCCAAGAGGAGCTCAAAACAGAAGGTTGGAGTCTTCAAGGTTATCGAAGCCAAGGAATCATCTGAGATCAACTTGACCAGAGTTTGAAAGAAGACGAGCTACTCCTAAAGTCGTAACCAAAAAGATCTTGAGCTAGATCCTAAGGGTCCACAACGCTGCTGTTGGTTATAATACTGAGACTGAAACCAGAAGACTTACTCAAGCCGTCCTCCTAAAACAACTGATTTAATACTTGAAGAAAGTGTATTTCATTGTAAAGTTTATGTCTGTTATTAACTGCCTTTTTGTTTAAGTTTATCAAATACTGTTGGTTATAGTGGAGTCTTTAACCAGGGAGACTGAAACTAAAGTATTCTAACAGCTTTGACATCTTTCTTACCTGCCATTGTTATTGTTGTAGAGTTGGATACTCTGGACTTTTTTTAACCACTTTAGGTGCAGTGATTCATTTACTTGGAAgttatttttttgtaaaaaaaaaacaaacctTTTTGCATTGGAACCAATTACTTTTCACAATACATGCTAAAGTAAATGCTGTACTCCTATCTTGTTCAGTTCACTAAATGGGTTAATTGATACTGTATGTTGGACCAGAACTCCAAGCACTTTTATGTAAGGAAAGGTATTTCTTTACAAGCTGAGAGCATTCCCTTTTAATTGTTTTGTATGCAACCCCTTTAAAAAATAAACCGTATCTCCTGAA
>XM_021609531.2
TCATGAAGCCCCACCTCCTTAATTCTACAGTCAGTCATCACACAGACAGACTGTTGCTTGCTTGTGTAACTTCTTTGTATAACTTGCTATATCTAGCTAGTTCTTCCTAAAATAAATATCCCAGGGAAATAGTTTATTTTGCTACATATCTAGTTTGGAAGGTTTTCCCAATATGAGTTGCGTAAAGGAAGAAACCCGAAGCATGTCTCCTCATTGTCCAAAGCCTAACGAATCTGAAGAACCGCTGGGTACAGCTATGGAGGAGACTTTGCCTGAAAATGCAGCTGCAAGTGTGGAAGCTGAAGCTGTAGTGTCTGCAGTTGtcatcacaaaagagatggaggaagaggagaaacaattgatggagaaaggagagaaacaaGAAGAGGAGATAATGAAAAAGGCTCGAGAAGCTCGGGAGAAGGAATCTCATGACATTCGCTTCAAGAGGCTGCAACACTTGCTGGAGAAAAGTAACATCTATTCCAAATTCCTTCTTACCAAGatggagcaacagcagcaggagGAAATGCTGAagaaagagagactgaaaaagaCACACAAGGGCACTGACAAAAAGACTGGAAGAGttgaaagaaagaaaagggagagggaggaagattaCAAAATCGCTGATGTCATGTCTAAAGAGGAAATTATGTCCAAGGCCAAGAAACCTAAAGTGGAGGATGAGGAGGTCCTTGGGAAGAAGAAGCTGGAAGCGGCGGACATTGAAAAGATGAGTGACTCAAATGCTGACATCAAGGGCCGTCTGTCGGAGGCTGTGAGAGACAATGCCAAACAACTGCTGGACCCAGACAGGAAAGTGAACGGGCAGGCCGTGCCCGCCCAGCAGCCCCTGCTCTTTACTGGGGGAGTCATGAGGTCGTACCAGATAGAGGGCGTGGAGTGGCTCAGGATGTTGTGGGAGAATGGTATTAATGGGATCCTGGCAGATGAGATGGGTCTGGGGAAGACCATCCAGTGCATCGCCCACGTGGCCATGATGCTGGAGAGAAAGGTGCTGGGACCCTTCTTGGTAGTGGCCCCCCTGTCCACTCTGCCCAACTGGATCAATGAGTTCAAGCGCTTCACtccagagGTGTCCGTACAGCTGTACCATGGGCCTGCTAAGGAGAGGATGTCGTTGTTAAAGCAGATTCGTAAGCCCCAGGGGCCTCACAACATGTGCCCTGTGGTGGTCACCTCCTTTGAGATTGCCATGATAGACAGGAAGTTTCTGCAGCGCTTCCAGTGGAAGTACCTGATCGTGGACGAGGGCCACAGGATCAAAAACCTGAACTGCCGACTGGTGAGGGAACTCAAGATGCTGCCCACGGACAACAAACTGCTCCTGACAGGCACGCCGCTGCAGAACAACCTGGCTGAGCTCTGGTCACTGCTCAACTTCCTCCTGCCTGAGGTCTTTGACGACCTCAAGAGCTTTGAGTCGTGGTTTGACATCGACACCATTGGATCGAATGCAAAACAAGTTGTGGCTAACGAACGAGAGCAGAACATCCTGCACATGCTCCACCAGATTCTGACGCCGTTCCTGCTACGACGCCTGAAGTCTGACGTGACGTTGGAGGTGCCGCCCAAGAAAGAGATTGTTGTTTACGCCCCACTCACTGCCAAACAGGAGTCTTTTTACACTGCTGTGGTCAACAAGACCATTGCCAAAATGCTGGGCCAGGAGAAGGGGGAGGCCCCAGTGGTGCTGACGACCGACGGCAGGCCTAAGCGCAGGACCAGGAGGCCTGTGGACTACAAAGAGACTGATGGTGACACGCCCTATGACCTGGAGAAATACCTGGAGAGGGTTCAGAAGGAGGCAGAGCTGAGccccGCCCCGGTGGTGGACGTGCAGATGCCCCTGGACTCCCAGATCAACCTGAAGCTGCAGAACATCCTCATGCTGCTGAAGAGGTGCTGTAACCACCCCTACCTCATAGAGTACCCACTGGACCCAGCCACTCAGGAGTTCAAGATTGACGAGCAACTGGTGCAGACCTCTGGGAAGTTCCTCATTCTGGACAGAATGCTGCCAGAGCTGAAGAGGAGGGGACACAAGGTGTTGATTTTCAGCCAGATGACGTCCATCTTGGATATCCTAATGGACTACTGCTACCTGCGTGGTTACCAGTACAGCCGACTGGACGGGACAATGGCTTATGCCGACAGAGAGGAGAACATGACAAAGTTCTCGTCTGACCCGGAGGTGTTCCTCTTCCTACTGAGCACCAGAGCAGGTGGCCTGGGCATCAACCTGACTGCTGCTGACACGGTCATCATCTTTGACAGTGACTGGAACCCCCAGGCAGACCTGCAGGCCCAGGATAGGTGCCACCGCATCGGGCAGACCAAACCCGTGGTGGTGTATCGCCTGGTCACTGCCAACACCATCGACCAGAAGATCCTGGAGAGAGCCTCAGCCAAGAGGAAACTGGAGAAGATGGTCATTCACAAGAACAAATTCAAAGGAGGAAAAGCTGAGCTCAAACAGACCAAGAGCTGTGTTGATGTGTCTGAGCTGATGGATCTTCTCAGCGCAAGAGATTACGAGAAGGAGGTGAAAAGCACCACGGGGAAGGTCATTAGTGACGAGGACCTGGAGTTTCTGCTGGACCGCAGTGACCTACTAGACAAGGCCAAGAGGAGCTCAAAACAGAAGGTTGGAGTCTTCAAGGTTATCGAAGCCAAGGAATCATCTGAGATCAACTTGACCAGAGTTTGAAAGAAGACGAGCTACTCCTAAAGTCGTAACCAAAAAGATCTTGAGCTAGATCCTAAGGGTCCACAACGCTGCTGTTGGTTATAATACTGAGACTGAAACCAGAAGACTTACTCAAGCCGTCCTCCTAAAACAACTGATTTAATACTTGAAGAAAGTGTATTTCATTGTAAAGTTTATGTCTGTTATTAACTGCCTTTTTGTTTAAGTTTATCAAATACTGTTGGTTATAGTGGAGTCTTTAACCAGGGAGACTGAAACTAAAGTATTCTAACAGCTTTGACATCTTTCTTACCTGCCATTGTTATTGTTGTAGAGTTGGATACTCTGGACTTTTTTTAACCACTTTAGGTGCAGTGATTCATTTACTTGGAAgttatttttttgtaaaaaaaaaacaaacctTTTTGCATTGGAACCAATTACTTTTCACAATACATGCTAAAGTAAATGCTGTACTCCTATCTTGTTCAGTTCACTAAATGGGTTAATTGATACTGTATGTTGGACCAGAACTCCAAGCACTTTTATGTAAGGAAAGGTATTTCTTTACAAGCTGAGAGCATTCCCTTTTAATTGTTTTGTATGCAACCCCTTTAAAAAATAAACCGTATCTCCTGAA

Function

NR:

description
lymphocyte-specific helicase-like isoform X1

GO: NA

KEGG:

id description
K19001 HELLS, DDM1; ATP-dependent DNA helicase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609541.2 False 3346 mRNA 0.48 23 68466950 68476448
XM_021609531.2 True 3356 mRNA 0.48 23 68466950 68476455

Neighbor

gene id symbol gene type direction distance location
LOC118965304 calhm3 coding downstream 1878 68463919 ~ 68465072 (-)
calhm2.1 calhm2 coding downstream 3176 68460100 ~ 68463774 (-)
LOC110527905 LOC106576688 coding downstream 6578 68448729 ~ 68460372 (-)
pcgf6 pcgf6 coding downstream 22095 68438073 ~ 68444855 (-)
nt5c2a nt5c2 coding downstream 33059 68409513 ~ 68433891 (-)
LOC110527939 LOC106576682 coding upstream 79543 68555998 ~ 68575122 (-)
LOC110527951 coda1 coding upstream 98924 68575379 ~ 68690343 (-)
LOC118964446 NA coding upstream 229238 68705693 ~ 68742071 (-)
LOC110528038 LOC106576680 coding upstream 292770 68769225 ~ 68848669 (-)
LOC110528072 NA coding upstream 433643 68909178 ~ 68923306 (-)
G75916 NA non-coding downstream 29495 68435565 ~ 68437455 (-)
G75854 NA non-coding downstream 86767 68379943 ~ 68380183 (-)
G75852 NA non-coding downstream 89195 68377255 ~ 68377755 (-)
G75848 NA non-coding downstream 94047 68372442 ~ 68372903 (-)
G75846 NA non-coding downstream 96007 68370738 ~ 68370943 (-)
G76134 NA non-coding upstream 76762 68553217 ~ 68553432 (-)
G76341 NA non-coding upstream 224639 68701094 ~ 68701345 (-)
G76369 NA non-coding upstream 250813 68727268 ~ 68727552 (-)
G75682 NA other downstream 255244 68210180 ~ 68211706 (-)
sdhaf4 LOC106576700 other downstream 304948 68157900 ~ 68162024 (-)
LOC110527687 sncg other downstream 785220 67669589 ~ 67681775 (-)
LOC110527584 LOC106576720 other downstream 1078906 67386509 ~ 67389299 (-)
LOC110527436 ppp2r5d other downstream 1456363 66965664 ~ 67010646 (-)
LOC118965321 LOC106576963 other upstream 1606385 70082835 ~ 70088715 (-)
G78414 NA other upstream 1878461 70354916 ~ 70355591 (-)
G79616 NA other upstream 2845495 71321950 ~ 71386523 (-)
G79700 NA other upstream 2993227 71469435 ~ 71470755 (-)

Expression


Co-expression Network