LOC118965305


Basic Information

Item Value
gene id LOC118965305
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 68486914 ~ 68495090 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036983666.1
CCGGTTAGGCTACGTTTCAAAGATAATGAAAGTGAAAGAGTATTGTCTAACGTAGGCTAGATAGGTTAACCTACACGACATATTGTTCTGCAGTCCCTATACGTTTTCTTCAAGcATGGATAAATTGAGAAAGATAAGGATAGTTCTGACAGAAATATTGTCAGCGGACGCCAGTTACATCCTTCAGCATGTACACCAGGAGGACCTGGTGACTCCACGCGAATACAGGAACCTGCACAATGACAGTAAATTACATCCAGAAGGTTCCATCGTCGATCTGCTGGATTCACTCCTAACGAAAGGAGGAGATGAGAAATGCACTAGATTCTTGACCCTGTTGCAGCAGCCAGTCATCAGATCAACCTACTACAAACTGGGAGAAATCAAACACATCGACATAGCTCCGGCACCCAGTAGCCCAGCACCCCCAGACGCTGTCCCAACCTCTGCCTCCTCCACAGTCCACACCCATCGCCCAACCACATCAGGTTCAAAAATTCCAACTACTCCTGTGAAAAAGAATAACCGGAGAAGGACCACTGCGTGTGGAACCATCACAGACGTTTCTGAAGTGAAGATGGGGAAGGCGGGGGGGAAATACTACCAAGCTGTTCTAAACCAAGAGGATGGGCCCATGGTCATTCTCATTTTGGATCTAGAGAAACGAAATATCTTTCTAGGAGCAGAGAAGAGAAGGTCTTCTGTAAAGTTGAAGAGAATCTCATTCGAGAAACTTGGAATGAACAAGTACCAAGAGGGGATAAAGTTCACAAACAAATCCGAATTGACTTACACAAGAGCCAAAAACACTATAAAGATGGAACCCACTGCTGATGAAAAagaataaacacatttttttttaactagaa

Function

NR:

description
uncharacterized protein LOC109888777

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036983666.1 True 869 mRNA 0.44 5 68486914 68495090

Neighbor

gene id symbol gene type direction distance location
LOC118966747 NA coding upstream 32021 68454837 ~ 68454893 (+)
inaa ina coding upstream 49375 68434566 ~ 68437539 (+)
borcs7 borcs7 coding upstream 78626 68405497 ~ 68408288 (+)
fbxw4 fbxw4 coding upstream 90513 68339037 ~ 68396401 (+)
fgf8a LOC106576696 coding upstream 163977 68316332 ~ 68322937 (+)
LOC110527930 LOC106576683 coding downstream 24704 68519794 ~ 68548397 (+)
LOC110528033 NA coding downstream 150682 68645772 ~ 68647556 (+)
LOC110528049 LOC106576681 coding downstream 267703 68762793 ~ 68769165 (+)
LOC110528057 LOC100136798 coding downstream 357348 68852438 ~ 68874903 (+)
LOC110528130 pla2g4f coding downstream 724632 69219722 ~ 69243901 (+)
G75893 NA non-coding upstream 26527 68459323 ~ 68460387 (+)
G75888 NA non-coding upstream 41262 68445398 ~ 68445652 (+)
G75745 NA non-coding upstream 108580 68377717 ~ 68378334 (+)
G75702 NA non-coding upstream 201288 68232213 ~ 68285626 (+)
G75167 NA non-coding upstream 384258 68099714 ~ 68102656 (+)
G75948 NA non-coding downstream 1511 68496601 ~ 68497921 (+)
G76016 NA non-coding downstream 59523 68554613 ~ 68554908 (+)
G76025 NA non-coding downstream 75758 68570848 ~ 68571060 (+)
G76029 LOC106576682 non-coding downstream 78546 68573636 ~ 68574210 (+)
G76028 NA non-coding downstream 79629 68574719 ~ 68575049 (+)
G75747 NA other upstream 111985 68374505 ~ 68374929 (+)
G74139 NA other upstream 1701945 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 1727930 66756207 ~ 66758984 (+)
LOC118965274 LOC106576739 other upstream 2062833 66417495 ~ 66424081 (+)
G73515 NA other upstream 2198445 66287679 ~ 66288469 (+)
G78121 NA other downstream 2076575 70571665 ~ 70654961 (+)
ccdc85a ccdc85a other downstream 2541380 71036440 ~ 71076239 (+)
G82111 LOC106577091 other downstream 5056526 73551616 ~ 73571737 (+)
G83836 NA other downstream 6414135 74909225 ~ 74909806 (+)
G83829 NA other downstream 6617570 75112660 ~ 75114190 (+)

Expression


Co-expression Network