Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964446 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 68705693 ~ 68742071 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051486.1 | True | 572 | mRNA | 0.46 | 4 | 68705693 | 68742071 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527951 | coda1 | coding | downstream | 15350 | 68575379 ~ 68690343 (-) |
| LOC110527939 | LOC106576682 | coding | downstream | 130571 | 68555998 ~ 68575122 (-) |
| hells | LOC106576686 | coding | downstream | 229238 | 68466950 ~ 68476455 (-) |
| LOC118965304 | calhm3 | coding | downstream | 240621 | 68463919 ~ 68465072 (-) |
| calhm2.1 | calhm2 | coding | downstream | 241919 | 68460100 ~ 68463774 (-) |
| LOC110528038 | LOC106576680 | coding | upstream | 27154 | 68769225 ~ 68848669 (-) |
| LOC110528072 | NA | coding | upstream | 168027 | 68909178 ~ 68923306 (-) |
| LOC110528078 | LOC106606490 | coding | upstream | 199501 | 68941572 ~ 68989407 (-) |
| shtn1 | shtn1 | coding | upstream | 304874 | 69046945 ~ 69095234 (-) |
| atp6v1ba | LOC100136607 | coding | upstream | 354810 | 69096881 ~ 69141094 (-) |
| G76341 | NA | non-coding | downstream | 4348 | 68701094 ~ 68701345 (-) |
| G76134 | NA | non-coding | downstream | 152261 | 68553217 ~ 68553432 (-) |
| G75916 | NA | non-coding | downstream | 268238 | 68435565 ~ 68437455 (-) |
| G76491 | NA | non-coding | upstream | 157583 | 68899654 ~ 68899916 (-) |
| G76492 | NA | non-coding | upstream | 158557 | 68900628 ~ 68900878 (-) |
| G76499 | NA | non-coding | upstream | 189166 | 68931237 ~ 68938082 (-) |
| G76500 | NA | non-coding | upstream | 197465 | 68939536 ~ 68939755 (-) |
| G75682 | NA | other | downstream | 493987 | 68210180 ~ 68211706 (-) |
| sdhaf4 | LOC106576700 | other | downstream | 543691 | 68157900 ~ 68162024 (-) |
| LOC110527687 | sncg | other | downstream | 1023963 | 67669589 ~ 67681775 (-) |
| LOC110527584 | LOC106576720 | other | downstream | 1317649 | 67386509 ~ 67389299 (-) |
| LOC118965321 | LOC106576963 | other | upstream | 1340769 | 70082835 ~ 70088715 (-) |
| G78414 | NA | other | upstream | 1612845 | 70354916 ~ 70355591 (-) |
| G79616 | NA | other | upstream | 2579879 | 71321950 ~ 71386523 (-) |
| G79700 | NA | other | upstream | 2727611 | 71469435 ~ 71470755 (-) |
| G79904 | NA | other | upstream | 3000974 | 71743045 ~ 71743809 (-) |
