si:ch211-125o16.4 (LOC106576941)


Basic Information

Item Value
gene id si:ch211-125o16.4
gene name LOC106576941
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 69386236 ~ 69400573 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021610006.2
TTCTCCAGCTCAGGTGGTGGTCAGAGAAGGCATTTAACTGACAGATCCTCTTAAATTGACAGAACAGCTGAGGTACAGAGGAGACAACATTGCCTGGGCTTTTGGAGGACTCTAAGACGTTGACAAGgTTATAGTGAACATTTTTCTTGATATGCTGCTGTAAATATACTTCAGAAATCATGAATGGGGAAAGTCAGCAAAGACGTTATTCCGAAAGCTTGGTCCTGGAGGATTCAGACAGAGGAGGAGTTGTCATCACTGGAATCACAGACCCTAGAGTCACTAATAAGAGTGGCTTGAAAGAAGGCGATGAGATTGTCGCTGCCACCATACATCTTAACCACCTTAATAAAGATGACCTGATGAAAATACTTAAGATCATGGAGCCTTATGAAGACAACATGAGTTTTGTGACAAAGCCGGATCTGAATGCCAGCGTCAGTCTCAGCTCACTGGACAGTGGTCTCAAAAGTCCCGGGGATATGCTCAAAGATACCTACAGCAGAATGCAGCGAGCAGTTGAGGCACCATCTATTGAGGTTAATGGCCTCAATGGACAATTAAATGCAGAAGGCTGGTTGAAGAATGAAATCAATGGTCCCGCTTTGAATGGGGTATTGCCCAATGTGACATTGGACACACCTGGACCTGATGGAGGTGCAAAGTTCCCCACCATTGGAATGTCTGGACCAGTAATGAAAGGAGCAGATCAGGAAGGCACCCTCACACACCCTAAAGTCAGTCTATCAACACCAGAGTTCAGCACTCCAGATGCTTCACTTGACTTGGAGAAACCTGAGGTTAAGACAAGTGGATTGATGTACAAGCCTCCAAAATTCAAAATGCCTCACTTCAAACTACCACACGTAAAAGCCAACGCGCCAAAGGGAGATGTGAATGTATCAGCAGATTTAGAAGGCCCTGGTTTCAGTGGAGAGCTAGAGAAACGAGACCTGAACCTCTCATCCCCTGATGTGGAAATCAAATGCCCAGATTTGAATGGGCCAAATGCTGTCTTGAAAGCTCCAGCTGTTGACATAGAGGCTCCTTCTGGCAAATTCAAATGGCTTACTCTCACAAAGCCCAAGTTTGGATTATCTGGACCAAAAATGAAGGGACATGAAGTGGACATAGATGCTGACCTGTCTGCACCTGACATGAATCTCTCCACTCTAAACATTGATGGAGAGATAAGCGCATCAGATGTAGACTTGAGTATACCAAAAGCTGAGGTAGATCTGCAAGCTCCAGATATCGACATTGAGGCTCTCTCGAGTAAATTTAAATGGCCTCATTTAAATAAACACAAATTTGGTCTTCATGGGCCCAAAGTCAACTCCCCTGGTGTGGATGTTAAGGCAGATCTGGAGAAACCAACAGTTGATCTTTCTGTCCCAAAGATTGAGGCTGAAATGAGCAACCCAGATTTAGAACTGAATTTACCCAAAGCAGACCTCAGCAGCCCTGAGGTAGATGTGAAGGCCCATGTTGTTGATATTCATCCTCCCACTGGGAAACTTAAGTTCCCAACACTCAAAAAGCCCAATTTCAGGCTCTCTGGACCAAATATAAAAGCTCCAGACATTGATGTTGATGCAGATCTGAAGGCACCTgacctcagtctctctgtccctgaagTTGAGGCAGGGCTTAACATGCCTGATTTGCACACCAATTTGCCAAATGCAGATATCAAAGGCCCTGAAGTAGACCTGAACGCATCAGAAGTGGACATTGAGCCCGTTTCAGGGAAATTAAAATGGTTTACTCTAAAAAAAACAAAGTTTGGTCTCTCTGGACCCAAGGTTAAGGGTCTTGAAGAATTGAATCTCGCCCCTCCAAACGTTGATGGAGAAATAAATGCACCAGATGTAGATCTTATTTTACCCAAATCTGACCTGGAAGGCCCAGAGGTAGATGTTGACACTGATGCCCATTCTGGAAAATTCAAGTGGTTCAACCTAAAGAAGCCCACAGCTGATTTGAAAGGTCCAGATGTAGATCTTCAAGCACCAGAGGTCGACATTAAGACACCCTCTGGAAAGCAAAGATTTCCAACTTTAAAAATGCCCACAATTAACTGGACTGGACATAAGGTGAAGGGACCAAAGCTTGATGGTGATCTGAAGAGAGCAGAATTGGACCTATCAGCTCCCAAGTTTGATGTGAATTTACCAGGAGCAGATCCCCAAGGCCTTGATCTTAACCTCTCCACACCATCAATTACAGCAGACATTGCTGTTCCAGATGTAGATCTTCAGGCACCAGAAGTTAACATGGAGGCACCCACTGGAAAGAAACGATTTCCAACTTTAAAAATGCCCAAAATTAACTGGTCTGGACATAAGGTGAAGGGACCAAACCTTGATATTGATGCTGATCTAAAGAAAGCAGATTTGGACCTCTCAGCTCCGGAGGTTGATGTGAATTTACCAGAAGCAGATCTCCAAGGCTCTGATCTCAACCTCTCAGCACCAGCAATTGAAGGAAACATCGCTGTTCCAGATATCAATGTCAGTTTGCCTGAAGCTAACCTCAAAGGACCAGATGTAGATTTAGACCTTGATGCTCCCTCTGGAAAATTTAAGTTGCCAAAACTAAAATGGACAAAAATAAGAAAAGTAAAAGGACCAGAACTTGATGTTGATCTTAAGACCTCAGAATTAGCTGTTGATGTTAATTCACTTGAAGCAGATCTGAAAGGGCCTTGTCTCAACTTGAAAACAACAGATCTCAACCTTTCAGCACCAGCAATTGAGGGAGACATTGCTGCTCCAGATTTCAATACCAGTTTGCCTGAAGTTGACCCTGATGCTCCCTCTGGAACATTCAAGTTGCCAAAATACAAACTCCCAAAATTCAGTGTAATAGGGCGAAGAGTTAAAGGACCAAACCTTGATGCTGAGCTAAAGGCCCCAAAATTGGATGTCTCTGTTCCTGATGTGGACGTCAGTTTGCCGACTGCTGACATCCAAGCCCCTGTAGTTGAGCTGAAAACACCCGACCTGGACCTTTCTGCTCCAAAGATTGAGGGAACCATCGCTGCTCCAGATTTGAGTGTCAGTTTGCCTGAAGCTGACATCAAAGGTCCAGAGGTAGATCTCGACACCCCAGAAGTTGACCTTGATGTTCCCTCTGGAACATTCAAGTTGCCAAAATTCAAACTCCCCAAAACCAGTTTAACAGGACCAAGAGTTAAAGGACCAAACCTTGATGCTGAGCTAAAGGCCCCAAAATTGGATGTCTCTGTTCCTGATGTGGATGTCAGTTTGCAGACAGCTGACCTCCAAACCCCTGTAGTAGAGCTGAAAACACCAGACCTTTCTGCCCCCAAAATCAAGGGATCTATGGCTGCTCCAGATTTGAGGACCAATTTGCCTGAAGCTGGCATTAAAGGTCAAGCGATAGATCTTAAAGCCCCAGAAGTTGATCTTGATGCTCCCTCTGGAACATTCAAGTTGCCAAAATTCAAACTCCCCAAAACCAGTTTAACAGGACCAAGAGTTAAAGGACCAAACCTTGATGCTGAGCTAAAGGCCCCAAAATTGGATGTCTCTGTTCCTGATGTGGATGTCAGTTTGCAGACAGCTGACCTCCAAACCCCTGTAGTTGAGCTGAAAACACCAGACCTTTCTGCCCCCAAAATCAAGGGATCTATGGCTGCTCCAGATTTGAGGACCAATTTGCCTGAAGCTGGCATTAAAGGTCAAGCGATAGATCTTAAAGCCCCAGAAGTTGATCTTGATGCTCCCTCTGGAACATTCAAGTTGCCCAAATTCAAACTCCCCAAATCCAGTTTAACAGGACCAAGAGTTAAAGGACCAAACCTTGATGCTGAGCTAAAGGCCCCAAAATTGGATGTCTCTATTCCTGATGTGGATGTCAATTTACCGACAGCTGACCTCCAAGCCACTGTAGTAGAGCTGAAAACACCAGATCTCAACCGTTCTGCCCCCAAACTTGATGGTGAAGTGAATGTACCAGAGATTAGAATGAATGTACCCAAAACTGATCTCAAAGGACCTGGACTAGTTCTAAAAGCTCCAGATGTAGACATTGATGCCCCTTCAGGCAAATTCAAATTGCCCCATTTTAAGCTCCCCACATTTGGCCTTTCAGGTTCTGAACTGGAGGGACAAAACCTTGATGTTGAGACACCTGACATTAAAGTTTCAGTTCCCAGAGTTGAGAGTCGACTTGAAGCCCCAAAGGTAGATATAGCTCTACCTCAAGCATACCTCAAGCTATCAGATCCTAATGTTAAAAGTGATATCAGTGCTCCAGATGTAAATCTAAGTTTACCAAAAACGTACCTCTCTGGCCCTGAGGTAGAGTTGAATGGTCCTGATCTAAGTCTCTCTACCCCAGAAATGAAAGTAAGTGTCCCAGACATTAAAGGCCCTGATGCCAAGTTTAAAGCTAAAGATGTTGACATTGAGGCTCCCTCTGAAAATCTGCCACATTTTAAGATGCCAAAGTTTGGTCTCTCGGGGCCTAGAATAAAGGGCACAGAATTTAATGCTAGTGCAGATGTAAATACACCTGATGTGGAAGTTTCAGTCCCCAAAAATGAGGGAGAGATTAGTACCCCTGAACTGAGTCTCTCTGCACCTGGCATTGAGGCCAGTGCTGACATGCCATATTTGGATGTAAATGTACCAGAAGCTGACCTCAAAGTAGATGTTGAGGAAGAGGGAGACACTCACAAAAGTACATTCAAATGGCCATTCAAGtggccaagctttaacttatCTGGCTCAAAAGGTAAAGATTCTGACATGGACGATGAGGAAGAATCAAAGCGTGATCAGGTGGAGGTGCCAATGTTTACATTTCACAGACTGCCACAGAACAACAAGATTGAGAGTGCATTCCAAGATGCTGCCAAGGCCCTTGGTGAGGCGATGGACACGCCAAAGCTTGAAGGAGGCCTTGAAACAGCTGGCGTAGAGGTCAGTTTGCCTAAAGTGAATGAAGGACAGAAGGTGACATCACCTTCAGGACTTATTAACATCATGGAGCGGTTGAATAGATTTAAAGCAAAAACACCCACAGCTAATGTCTCCCTACCAGAAGTGAAAGGTGAGCTCCATACCCCTAGCCTTGATGTCAGCTCTACCTCAGACGTAGATAGTTCCACTAAGCTTAAAAGAGGGACTTTCAAAGTTACAAAACCTGAATCTGGGATAGGCCTGGAATACCCTGTAGTGGACTCAGAGGGAAACGATAGCATGTCAATAAGCCTCTCCAATATGCTTGGTCTGAATATCAAAGAGCCCGATACAGATTATTGATAGTTTCCAGTCATGTGAACCGTACACTTGGGATAAACCAACATGATTGTAACTACTTTGTAAATACATACATTTGTTCATGAGTTGACTCCATTTTAAGGATGTGTTTTTTCTCTATGtacaaacaaaacagaaacaTGTAATTATTTGTTTGTCGATTCTCTGATAACTTAGTTAATCCATATGCTACTACATCTATATTCAAACAGTTGACAGCAAAATGAAGGAAAATATGCTCATTGGCTCTGTGTACTCAAACGTATTTAAATTATGGTAATGTTTCCCAAATGCTGTTCACTTGGAAGtttacttattattattttttacaaatgccTCAGTATTGTATCTTTCACAATTCAGACATGTTTCACCCATAAAGGAGACAATCTTTATGGAAGCTGTCATCTTCACATTTTAAGCTAAAACAATTGTTGAACAGTGAAATGTAATTCTACTATTAATTTGTTATTTCCTTCTCCAATAAACTACAATATGTCTATATGACTAAA

Function

NR:

description
PREDICTED: neuroblast differentiation-associated protein AHNAK-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021610006.2 True 5803 mRNA 0.43 5 69386236 69400573

Neighbor

gene id symbol gene type direction distance location
LOC110528163 LOC106576940 coding downstream 23139 69288453 ~ 69363097 (-)
vax1 LOC106576936 coding downstream 206673 69169520 ~ 69179563 (-)
atp6v1ba LOC100136607 coding downstream 245142 69096881 ~ 69141094 (-)
shtn1 shtn1 coding downstream 291002 69046945 ~ 69095234 (-)
LOC110528078 LOC106606490 coding downstream 396829 68941572 ~ 68989407 (-)
LOC118965314 NA coding upstream 20494 69421067 ~ 69432188 (-)
exo1 exo1 coding upstream 36749 69437322 ~ 69445733 (-)
LOC110528285 NA coding upstream 165609 69566181 ~ 69569154 (-)
LOC110528376 LOC106576957 coding upstream 599744 69993128 ~ 70022403 (-)
LOC110528384 LOC106576958 coding upstream 629472 70030045 ~ 70036532 (-)
G77284 NA non-coding downstream 13443 69372575 ~ 69372793 (-)
G77279 NA non-coding downstream 16679 69369272 ~ 69369557 (-)
G77277 NA non-coding downstream 20106 69365611 ~ 69366130 (-)
G77276 LOC106581475 non-coding downstream 21687 69364231 ~ 69364549 (-)
G77235 NA non-coding downstream 82212 69303752 ~ 69304024 (-)
G77365 NA non-coding upstream 109690 69510263 ~ 69539584 (-)
G77415 NA non-coding upstream 176688 69577261 ~ 69624783 (-)
G77461 NA non-coding upstream 234184 69634757 ~ 69635139 (-)
G77467 NA non-coding upstream 242646 69643219 ~ 69643434 (-)
LOC110527951 coda1 other downstream 696007 68575379 ~ 68690343 (-)
G75682 NA other downstream 1174530 68210180 ~ 68211706 (-)
sdhaf4 LOC106576700 other downstream 1224234 68157900 ~ 68162024 (-)
LOC110527687 sncg other downstream 1704506 67669589 ~ 67681775 (-)
LOC110527584 LOC106576720 other downstream 1998192 67386509 ~ 67389299 (-)
LOC118965321 LOC106576963 other upstream 682267 70082835 ~ 70088715 (-)
G78414 NA other upstream 954343 70354916 ~ 70355591 (-)
G79616 NA other upstream 1921377 71321950 ~ 71386523 (-)
G79700 NA other upstream 2069109 71469435 ~ 71470755 (-)
G79904 NA other upstream 2342472 71743045 ~ 71743809 (-)

Expression


Co-expression Network