si:dkey-174i8.1 (LOC106576967)


Basic Information

Item Value
gene id si:dkey-174i8.1
gene name LOC106576967
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 70522910 ~ 70526933 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036984474.1
TTGAGACAGAGCAGTGTGAGGGACACTAAGTGTGACACACACCAAACTATCTCACAGACAGCAACATTATCCAGTACCCTCACCTACTCACAGCACATCAAGGACGTCTTATGCAACGTGGAGATGAATAGGGAGACAACAGAGAGGTAGGGGCAAGAAAGATCCATCCTTTTTCTGGTGTACGTACACTCACTATGCTCCCCCTGCAACTCAGTGGCCTCAACAGGTAGCCTCCTGCATTCACCACCCCCACTGTTTGTGCAGACAGAGCGCAGGGAGGGCTCCGCAAGGCTGCTCTAAATCGGAGTAGCAGATCCCAGACAGAGACTAACCTCCAGACTGACAATAGTTATGAGAGGGGCTGTCGAGTCGGGCTTCCCCCTGCTCGGAGTGGCCGTACTAGGCTTTCTCTGCTGCATGCGAGGGGGTCAGACCCAGGATGACTCGGGCTCTGGGAGGATCCCAGGCACCATGCCTCCCCACCTCATCTTCATCCTGGCGGATGACCAGGGCTATGGGGACGTGGGCTACCATGGCTCGGACATCCACACTCCGGTCCTGGACCAGCTGGCTGGAGAAGGGGTGAAGCTGGAGAACTACTATGTCCAGCCGATCTGCTCACCCTCACGAAGCCAGCTTATGACCGGGCGGTACCAGATTCACACGGGCCTCCAGCATTCTATCATCCGGGCACGCCAGCCGCTGTGCCTGCCCCCGGATGCGCCCACCCTGGCTGAGCGGCTGCAGGAAGCGGGCTACAGCACCCACATGGTAGGAAAGTGGCACCTGGGCTTCTGCCGGCCGGGCTGCCTGCCCACGGGCCGCGGCTTCCAGAGCTTCCTGGGCTCCCTGACTGGCAGCGGTGACCACTTCTCCTACCAGAGCTGTGACCAGGCTGAGGCCTGCGGCTTCGACCTGCACGATGGGGAGAGACCAGCCTGGGAGATGAGCGGTAACTACTCCACAACGCTCTACATAGAGAGGGTTAAGAAGATCCTGAGAGCCCATGACCCCCGGAAGCCCCTCTTCCTGTACTTGGCCCTCCAGGCAGTCCACACACCCCTCCAGGCACCAAACCACTTTCTGCAACGCTACAGTGCCCTGGACAACCGCCCGCGACGACTCTACGCAGCCATGGTGAGCTGTGTTGACGAGGGTGTGGGGGCGCTGGTGCAGGAGCTGAGGACTCGTGGCCTCTACCAGAACTCTGTCCTGGTCTACTCCTCAGACAACGGGGGCCAGCCCCTCTCTGGGGGCTGCAACTGGCCCCTGCGTGGGGGGAAGGGCACGTACTGGGAGGGGGGAGTACGGGCGGTGGGTTTCGTCCACAGCCCACTCCTGAAGAGGAAAGGAACAGTGAGCAAGGCACTGATCCATGTTTCTGACTGGTACCCAACCCTGCTGTCTCTGGCGGGGGCACCGGAGAAGGACAGAGGCCAGCTGGACGGCCATAATGTGTGGGGGGCCATCAGCCAGGGGCTGCCTTGCCCCCGCACCGAGATCCTGTTCAACATCGACCCGGTATCCCGACGGCCTGGGGAGGCAGACTCCAGGACCCTGGCCCTTAACGGCTTTGGCATCTGGGACACGGCATTGCGGGCGGCAATTCGGGCCGGGGACTGGAAGTTGCTGACGGGAAATGTGGGTGATGGGGACTGGGTGCCCCCTCAGACCCTGCCCGGGGGGCCCCATCAGTGGCAGGGCATGGAGAAACGTCAGGACCAGAGGGGGAAGTCTGTGTGGCTTTTCAACATCACCGCTGACCCTTATGAGAGGTCCGACCTAGCCGATGCAAGGCCTGAGGTGGTCAAAATACTGCTGGCCAGGCTGGCCGAGTATAACCAGACGGCTGTGCCGCCCCGAAACCCCCCCGATGACCACATGGCGGACCCCCAGCTCCATGGGGGGGTGTGGACACCATGGCTGGGTGAGCAAGGCAGCGAGGGGCCAGAgggcagcggggagggagggaaagggaaggcAAAGAGTAGTAAAATGAGGCACTGTAAGGTGTGCAAACTGAAAGCCCTTTTTAAGAAGGTGGGCTCCCGGATGCAGAggtcctctctcttcttttagtccacagagggagggaatgagCACGTGGATGTACAGGCAGGACTGACCGGCCTACATGAGACTGGATCTTAGTCACTGGCTGTCCCCTGGCCACTAAGTAGGGTGACTTTGTGCAACTGTGAGATTGATGTTGAGAGTGATGTTTTGATGTCTCATCTGCCCATGAACAGAAGGACACGATCAGAATGACACTCGGACACCCAGAGAGATATTTCcttcatttgttgttttgttatttgtACGTGGTGATAGAATGGACCTTCTAGGCTACACACTGCTTATCAAATACTTCTCTGTTCCCAAACCAACTCTAAACAACACCTCACTGCATCAACATTCTAAAGTGAGTACTGGCCAGCATAAGCTAAGCCAGAGATACTGTGGCTGTTGTGCTCTCCAGTgctgttacagtacagtacacctaTAATTTAAGCCATGTTCCAGACATATGTAGCTCATACTGTAAGTAAGTGTGATATGCCAGCTGGCAAATCCCAGACTGTGAAATAATGCAGATGTAACTGGATCCGACTGGATCAGGGTGACACAGGTTTGGACATGCAACAATACAGAAGCCAGATCAGATCAGATGTGAAGCTTGCATCTCTTGACTGTGAGCCATTTGTGTAGAAACGAATGTGTGTGATTATTCATGTACTGGAGATAATGTAGGCTATGTTCAGCAATCCTGCAGCAATCCCACGCACAGGACAGAGAAACACTCTTTATTTCTCATTTCCATCAGTATGACGGAGCGTGCACCAAGCTGCCTACTActtccctgcctcctcctctctagcCAAGTCTCACCCTTCcctcttgtcctctctccccatctttcacTAATTTCATCTACTTCTCTCTTGCTCCTTGCCTCTTTCCCACAGCAGTAGGAAACgtttcttcatcctcctcctcctctctcttcgtCATCTTCTTCTCGTCTTCTTCCTCCTCAATCTTTCTCGTTTCATTCAGAGATCAGGTCAGTTCACAAGTGATAGGGAGGATGAATATGTTTGTGAGAAATGAGAACAGATATGCAGAGTTACGTAAACAgcaaggaggaggaagggggaggaggaaggctCCCTAGGGGGGCAGCAAGGCCATTTGAAGCATTCCTTGTCTTATCTGTATTCTCCTCATTTGTGAAGATGAACATGTCATAACATACCAGTATGTGCCTATGTATAATTTGATGCTAACCAAAATGTGTTCTGCCTTTTGCTGCTTTCCATTTATAAATACTATTTGACAGAATGTGTGGGCGGTTTGTCACTTGTGTTGAgcttctgtgtgtatgtgtttatgtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcacacattcCATGTAGATACATGCATAGTA

Function

NR:

description
arylsulfatase I-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036984474.1 True 3457 mRNA 0.54 3 70522910 70526933

Neighbor

gene id symbol gene type direction distance location
camk2g2 LOC106576966 coding downstream 10637 70405340 ~ 70512273 (-)
LOC110528401 LOC106576963 coding downstream 411493 70095689 ~ 70111417 (-)
LOC118965321 LOC106576963 coding downstream 434195 70082835 ~ 70088715 (-)
LOC118965320 LOC106576961 coding downstream 447012 70056552 ~ 70075898 (-)
LOC110528384 LOC106576958 coding downstream 486378 70030045 ~ 70036532 (-)
cgas mb21d1 coding upstream 183941 70710874 ~ 70713631 (-)
eef1a1a LOC106576970 coding upstream 187690 70714623 ~ 70729159 (-)
slc17a5 slc17a5 coding upstream 206922 70733855 ~ 70745693 (-)
LOC110521978 LOC106576971 coding upstream 233802 70760735 ~ 70766495 (-)
LOC118966765 NA coding upstream 238418 70765351 ~ 70765482 (-)
G78419 NA non-coding downstream 164188 70358503 ~ 70358722 (-)
G78415 NA non-coding downstream 166423 70356274 ~ 70356487 (-)
G78412 NA non-coding downstream 169039 70353429 ~ 70353871 (-)
G78409 NA non-coding downstream 174807 70347584 ~ 70348103 (-)
G78389 NA non-coding downstream 199342 70322921 ~ 70323568 (-)
G78558 NA non-coding upstream 119191 70646124 ~ 70653964 (-)
G78807 NA non-coding upstream 205418 70732351 ~ 70743072 (-)
G78855 NA non-coding upstream 296208 70823141 ~ 70877036 (-)
G78874 NA non-coding upstream 321763 70848696 ~ 70849537 (-)
G78910 NA non-coding upstream 373882 70900815 ~ 70902212 (-)
G78414 NA other downstream 167319 70354916 ~ 70355591 (-)
LOC110527951 coda1 other downstream 1832681 68575379 ~ 68690343 (-)
G75682 NA other downstream 2311204 68210180 ~ 68211706 (-)
sdhaf4 LOC106576700 other downstream 2360908 68157900 ~ 68162024 (-)
G79616 NA other upstream 795017 71321950 ~ 71386523 (-)
G79700 NA other upstream 942749 71469435 ~ 71470755 (-)
G79904 NA other upstream 1216112 71743045 ~ 71743809 (-)
G80957 NA other upstream 1680996 72207929 ~ 72211089 (-)
LOC110528794 LOC106576993 other upstream 1721671 72202814 ~ 72251918 (-)

Expression


Co-expression Network