cgas (mb21d1)


Basic Information

Item Value
gene id cgas
gene name mb21d1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 70710874 ~ 70713631 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021610650.2
AGTGTTCACAATCACATTTCATCAAACCAAAACAGCGAAGACGATCATTTCTCTGGCATAGTAGACACTAGTGGGTGTCGCATCACGATCATACATACTACAATGAGCGGGAGAGGGAAGACAAAAAAAAGTCCAGCCGGGCCCGCGCAAAGAGTCCAGCCGGGGCCAGAACCAGGGTGTGCCAAGAGTTTGGTTCGGGACAAGAATGGTTCAATTGGAGGTTGCCATGCAATGATGGACACTAAGGAAATGCAACAGATTCCCGAGGAAAATAAACCTAAGGAGCATAAGCAGCCTAAGTGCACCACTGAGGGAAAGCcaactgtgccaccagagaccggTTCAAGGATTGTTGACTCATATCAGGATAAGATCCTGTTTACAACACTTGATAAATTAAAGATTAAGATGACACGTAAATCGGAATCATCAAGAATTGTCAATGACGTGGTAAAGTGTATAAGTGACCACATGAAAAAGCGTACAGAATGCTTCAAAGATGTAAATGTTCTGGGCACTGGAAGTTACTACGAAAATCTAAAGATTTCTGATCCCGACGAATTCGACGTGATGTTTAATTTTCCGGTGGAGCGGGTGGACATTCGGCCATTTGGAGACGATGGAGCTTTTTATAGCGTGGCATTTAAACGGGGAAAACACTCTCTGGATCGCTTCAAAAATAGGGACAACACGGTATCTGCGAGTGAAATGCTGAAGGAGTTCAGAAACGAAGTTATAACGTCTGTGAAGAAACAGAAAGACGTGTTGgtggagaagaagaaaaagggtTGCCCGGCGGTGACCTTAATGCTAAACGGGACGGGAACTGTTCCCATCTCACTGGACATTGTTCTGGGACTACAGGTCAATTCGAGTTGGCCCACTTTCACCCAGGGAGGCTTCAAAATAGACACCTGGCTTGGGACCAAAGTGAAGAAAGATCTAAAGACACATTCATACTACCTCGTTCCGAAGTATGAGGGAAAGGGCACGGTGGAACTGGAAGGGGTCTGCGCCAAAGACTCTTGGCGCATCTCATTCTCGCATGTGGAGAAGAGTATCATAACAAATCATGGCTCCCAGAAGACCTGTTGCGAGGCAAGCGGAATTCGCTGCTGCAGGAAGGACTGTCTGAAGCTTCTGAAGCACCTGTTAAGCCTTTTGAAGGCAGAGGACCCTAGTCTGTCCAAGTTCTGTTCCTACCATGCAAAGACCACCCTTCTGCACGCATGCTGCTCCAGGACCAAGGACAGTGACTGGGAGGCGACGCAGCTGGGACCCTGCTTCCAGCAGCTGTTGAGAGACTTTGAGGGCCACCTGAAAGATGGCAAGCTCCCCAACTTCTTCATCCCCACACACAACCTGCTGGGCTCTGGCCACAACCGCAGGAGCTGCCTGATCCTGGCCCAGTGTATTGAGGAGCAGCGCAACAAAGGTTTCCCCATCTTCAGCTAGTGAGTCGGGACTACCTCAATCACTGCCCCCTTAGTGACTCACCCAGAGCCCCAATAGACATAAGTGGAGTATAGCTGTGGTCCCATGCTGTTATCTATGTTAAAAGCAATGGCATAGGCAGGAGGAATTGAAGAGCAGAGGAGAAAGGAGTCAGAAGTTACCATTTAATTCAGATCAGAACAGTTTTGAGTCTTCCCAGAGATGATACATGGAGAAGAGCAGTTGGCTTTCAAATTATAAAAAGGTAATTTAAACTGTCTGTAACACTATGAATTAttcaataaaacaaaaatgtgtaaCACAAAAAAGGATGAACGCTGGAGATTCCAGAACTGAAGTTGCAAGTTGCTTCTTCCTCTcctgaaaaagtaagaaacacaGATTTGACAATTGGCAAAAGGATATGGATATGAGCTGTCAGTGAGGATTTtttaactgtttaaaaaaaataaaacccaGGAAATCTTCCTACTAAGTACGTCAACACCAGctatatttggtgtgaccacacTGTCATATTATAGGACTCAAACGGTCTAACAGAGGGAATGTGTGTGCGATGTGAACGCACTGCATGTTCTGTTTTCCCACAGCATTTGTATTTCTGTTCAGCTTTTTCCACCAAAAGCGGTTTCTTTGTTAATGCATTGGAATTTAAGGCCTGAGGGCAGTGGTGTTTTCAGCTGAGTATCAATAAATTGCAACGTGTATGTGCCAAATATCCTACTTTTCAATAAAAGGGAATAAATTGCAAA

Function

symbol description
mb21d1 cyclic GMP-AMP synthase

NR:

description
cyclic GMP-AMP synthase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021610650.2 True 2210 mRNA 0.45 5 70710874 70713631

Neighbor

gene id symbol gene type direction distance location
si:dkey-174i8.1 LOC106576967 coding downstream 183941 70522910 ~ 70526933 (-)
camk2g2 LOC106576966 coding downstream 198601 70405340 ~ 70512273 (-)
LOC110528401 LOC106576963 coding downstream 599457 70095689 ~ 70111417 (-)
LOC118965321 LOC106576963 coding downstream 622159 70082835 ~ 70088715 (-)
LOC118965320 LOC106576961 coding downstream 634976 70056552 ~ 70075898 (-)
eef1a1a LOC106576970 coding upstream 992 70714623 ~ 70729159 (-)
slc17a5 slc17a5 coding upstream 20224 70733855 ~ 70745693 (-)
LOC110521978 LOC106576971 coding upstream 47104 70760735 ~ 70766495 (-)
LOC118966765 NA coding upstream 51720 70765351 ~ 70765482 (-)
rin2 LOC106576973 coding upstream 58404 70772035 ~ 70840706 (-)
G78558 NA non-coding downstream 56910 70646124 ~ 70653964 (-)
G78419 NA non-coding downstream 352152 70358503 ~ 70358722 (-)
G78415 NA non-coding downstream 354387 70356274 ~ 70356487 (-)
G78412 NA non-coding downstream 357003 70353429 ~ 70353871 (-)
G78409 NA non-coding downstream 362771 70347584 ~ 70348103 (-)
G78807 NA non-coding upstream 18720 70732351 ~ 70743072 (-)
G78855 NA non-coding upstream 109510 70823141 ~ 70877036 (-)
G78874 NA non-coding upstream 135065 70848696 ~ 70849537 (-)
G78910 NA non-coding upstream 187184 70900815 ~ 70902212 (-)
G78995 NA non-coding upstream 288686 71002317 ~ 71002542 (-)
G78414 NA other downstream 355283 70354916 ~ 70355591 (-)
LOC110527951 coda1 other downstream 2020645 68575379 ~ 68690343 (-)
G75682 NA other downstream 2499168 68210180 ~ 68211706 (-)
sdhaf4 LOC106576700 other downstream 2548872 68157900 ~ 68162024 (-)
G79616 NA other upstream 608319 71321950 ~ 71386523 (-)
G79700 NA other upstream 756051 71469435 ~ 71470755 (-)
G79904 NA other upstream 1029414 71743045 ~ 71743809 (-)
G80957 NA other upstream 1494298 72207929 ~ 72211089 (-)
LOC110528794 LOC106576993 other upstream 1534973 72202814 ~ 72251918 (-)

Expression


Co-expression Network