slc24a3 (LOC106576975)


Basic Information

Item Value
gene id slc24a3
gene name LOC106576975
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 70863113 ~ 70961979 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021610716.2
TCTGTTGGCTATAGCTTtacaatctctcacacacacatactcctcccctctcttttctgcGCTCACTCTTCAACATCACCAGCCTCGCTGCAGACTGTGTCCTGCGAGAACTGGCACCAAACTGAAGCATCCATGGAGTGCTCCGTCCTCTCGCAACATCCACAACAACACTTCGGTCCGAAGTAATATAGAAGACAACATCGCAACCGACGCAAGATAGAATAACAACATTTTCTTTCGCCCATCTCTTCCGTTGTGTAACTTTCCGAAACCCGCTTTCTCCCGGCTTCCCTCCACGTTCACTTTCCGGTACCCCAGAAGCCTTGTCGCCGTAAAAACGTATCCATGGATGGGATGGCTGTTGGCGTGATGCCCGGGACCGTCCGGGTGCGGTGTGGGCAGCTTCAAGTGATGCTGAACCAGCAGAAAACCAAAGCTAGGCGGAAAAAGCGAAAGGAGTTGCTCGGTGTGCAGATGTGCTTCATTGGGGTGCTGCTCGTGCTTGTAATGGGGCTCTCGTGTTTGGCGGAGAAAGCAGGATATGACCTCTCAAGCATTACTACTGAGGAGGGTGCCGGGTGGGAGACTCGAAGGCTACTACAGGAATCCTGGGACAACGAGACAGACCCTCTGTTGGGCCCCCCGTCCAAAAACTGCACTGAGCCAGCACTACATGAGTTCCCCACAGACCTGTTCACCAACAAGGAGCGCACAGAGGGAGCGGTGGCCTTACATGTCCTATTTGCAATGTACATGTTCTATGCACTGGCCCTAGTGTGTGATGACTACTTTGTTCCGTCTCTGGAGAAGATATGCGAGCGTCTTCATCTTAGTGAGGATGTGGCAGGTGCAACCTTCATGGCGGCCGGCAGCTCAGCTCCTGAACTCTTCACCTCTGTCATCGGTGTGTTTATCACTAAAGGGGATGTGGGGGTGGGCACGATTGTGGGCTCCGCCGTCTTCAATATCCTCTGCATTATCGGAGTGTGTGGAATATTTGCTGGCCAGgCGGTGCATCTGTCTCGTTGGTCTCTTCTGAGAGACTCCGTGTACTACACCCTGTCCATCTCTGCTCTCATAGTGTTCATATATGATGAAAAAGTTTCGTGGTGGGAGTCTCTGACACTGGTTCTGATGTATTTCGGCTACATTTTGATAATGAAGTTTAACTCGAACATTGTGCGCTTCCTGGAGAGGCGGAAGAAGAACCCGTCCAGCCTGGGGAATGGCACAGCCAGTAACGCCGACCTGGATGACAATTGTGATGCCACCGCTGTCTTGCTGAAGAAAGCTAACTTACACAGAAAGCAGTCAGTGTTGATGGTAGATGAGTTGCTGTCAGCCTACCCTCACCAGCTGTCCTTCTCTGATGCCGGCATGAGGATCATGATCACCAGCCACTTCTCCCCTCGCACCCGCCTCACCATGGCCTCACGCATGCTCATCACTGAGAGACAGCGTCTGATTAGCACCCGGCCGTTCACGAACGGAGACTCGGAGGTCACGGTGAAAGTCGGCGGTAGGCGGGGCCTGGAGAATGGACTGGGCGGGCCCGAAAGGGGCGTCAATGGTCGCCGTGGTCACCATGGAGAGGACGACAGGGGAGGGGTGGAGTCTGGCAACGAGACGGAAAACGAGAACGAAGACAATGAGAataatgaggaagaggaggaggaggaagaaggggagggacCTTTCGTGCCCTTTCATGCCCCAGctgggtGCTGTAATAAGATCAAGTGGCTGTTGGCCTGGCCTCTGTGCCTGCTCTTGTTCTTCACGGTGCCTAACTGTGCCACCCCTCGCTGGGAGAGATGGTTCATGGTCTCCTTCGTCAACTCCACCCTCTGGATTGCTGGCTTTTCCTATGTCATGGTCTGGATGGTAACAGTGATCGGGTTTACTCTGGGTATCCCTGATGTTATCATGGGCATCACCTTCCTGGCAGCTGGCACCAGTGTCCCTGATTGCATGGCCAGTCTTATAGTGGCACGGCAAGgtctcgGGGACATGGCTGTGTCTAACTCTATAGGCAGTAATGTGTTTGATATCCTTATTGGACTGGGACTACCCTGGGCCCTGCAGACCCTAGCCATCAACTACGGCTCCTACATTCAACTGAACAGCAAAGGGCTCATCTTCTCTGTGGGACTTCTGTTGGGGTCTGTGTTCCTCACGgtcctgGGGGTACATCTGAACGGGTGGAAACTGGACCGTCGTCTGGGCCTGGTGTGTCTGTTCATGTACTCCATCTTTCTCTGCTTCTCCATCCTCATAGAGTACAACATCTTCACTTTCGTCAACCTGCCCACCTGCAGAGACCGCTGAGGCttgcttctctctcctctctgtcgccccctgtctgtctgcggCTCAGATCTTTTTTTGTATTATTCAAAGCATTCGTTTTTGAATTTCGTCTCTTTTCTTTATGGTCAGTGTAATATGGAGCAGCCCTGGTGTGTGGGGTTGTTTTTAAACAGGAGAGGAGATGATTGGGCACACACATGCGGGAGCACAAACTGACTTGTAAAAAGCTCTCACGAGGACTCGTGAACAAAGCTATTTTTGTCGACTACTGCCTGCTTTGATGTGAAGATTGTTTTTGTTTGGGATTTTTTTTGTAAAGGTGATTGAAACTGCGTTATATTCTTCAGTGTGATCTTGATTATATTTTATAATGTAATGTGTTTAATAGCTGCTAACTGGCTTAGAGGATAGCCGGCCTGAAGAAAATTGATAGTCTACTGGAATAGTGTTGTTCTTTGAACAATATTAGCAATGATTTTTATGGTTGATCATGTCAATGGAAATCATTTAAGGTGAAAGTGCCAGGTGACTTGATGTAAATAGTTGACAGAGGACATTTAGCTGGATGACACCCCAGACTTCTCATCATGATCTGTGGGCATTACCCCcccccaatctacacacacacacacagacactgttgtTGAGCAGCAGTATGTACACAAAGATACTTTTTCAACATCGCTTAAGCAGCTTTTATTGATTCTGTCCCTTTTGATTTAATGTATAGAGTCGATTTCAGGAGAGGACAGGATAAATGGAGTGCATTTGGCTGGAATAGGCAACAGCAATATGAGGTCAGATATGCTATACTGTTGGAAAGTGAAAGGTATCTCTAAAAGATAATGAAATGTGTTGAATTAGGGGTTTTGTACATTTTTACCCTTTGTAAATACACCCAGACGAcagatattttatttattaacttATTGAACATTATTTATGCAtatttggagggggggggggggggggggggggtctgcatTTTAAATCCAAACCAACCCATATTGGTCTCAAAGATTAGTTCATTTTGGAGATACTGTCTGCAGAGCTTAGTGACACCAATACTCCTTGGCATGTTGTGAGACTcaagtcaaaagtcacttttaGGAAAAACATCCTTTCAACACTCTTTTGACTCTTGCAAGAGAGGAATTTCTACTTAAGTTATTCTGAACATTTACTTTATGATGGACTTGATTGAGATGGTAACAATTTATGGAAGAAAATGTATTGCTCCTTAGCAAGTCAAACCTCTTTAGTGAGAATTTATTTACACTGAGGTATATTATATGTGGTACCTATCcaaggtgggagactctgtttcAATGGCCATGAGTGTCCCTACTTGCTGATTGTTAGGACAATCTCCTGGTAAAATGAAGCAAGCGATTGTGAAAAACAGTGAACTCCTTTTTTTCCACTCATGTAGCTCAAGAGAATGAGATGTGCTGCTACCTAGGGGCACAACCATGAACAACAGCACACTATTGGATTCCTACAGACTTTGTCCTATTCAAAGTAACTTTTACCAAATGTACATTGCCTGGAAGGACTTCCTGTTTAAAGGGTGGCACACAGAGGAAATGAGGCGTATCTGTACTAATTACTCCTAGTGATATTATTCATAGGAGTAGAGATCATTGAGAATGACaaaggcctctagtggccaaaaagtcatattagcatgggcagcgccattgagggcttccaccattacaatatagtcaactgggtgggacttccaacttcattggctgatccctccttgTGACCCTGTTGGCATCATGTCCAcccaggtcatcaggagggatcagccaatcctgaagaagaaaatgtactacttaAACAAGGAGATGCGCTCATGTTGTCACAGATGCTATAATGGCACATATACAAAGATTAGTCCTCGATCTATCTCTATGGTAGGGATGCACTTTGAATAAAGCATCTGAACTTTGACCTGACCTGGTGTTGGTTGGGCTGTGGTAATGTGTGTTTTGTAATGCACAATGTTTAGAGGTTGTGGTACATTTAAATCACTGCTTATGTCCTTTGCGCCTTTAGTTTAAAGGGAATATATCAGACATCCTCTGTCAACCTACAGGGGATTCTGAGAGACTGTTGCCCAAGGCAAGccaaccagcaaagcaccataatTACATTGGCCCTACAGAAAGTattatatttctctctctatcctctcctgaAAGCAGGGGAACACTGTTAAAACACTGGTCAAATCTTGATGTTTCACCTGGTGGGTTTATTTCATAAATGCAAATAACACATTTATTGGAGAAGAAAAACGTTGTTTTACAAACTCTGAATGACCTATCTTGTGAACACTAATTTCATGGACCAATAGCACAACATCTCAAATGCATAAGTTATAACGGAGAAAAAAGTCTCAGAATGTACAAAGTCTTAGGGTTGcatttgtttttaaaggatgtttgtttgtttttgttcatATCATATTTATCATATTTTCCTCGGGAGATTAGAATAGACAGAGCACAACTCTAGTGTCAAAGGAAAACAGGGTTTATCATTAAAATGTCAAATGATTTATAATGCAATAATTATGAGCTTTACAATGTAAATATGTTGTTTGTTTGAAGGCACATAAGACAGTTTTCTAGATGGTACATACACGTACACAGTAGCACATCTATCTGTCAATAGAGGAACATCTTTCTTGTAGGACAGACTAAGGCTAAATGGTTTACAGAAATCTGCACTGGAAGCTTGTAATGAAAATGGGACTTATCTAAACATCTACCAGCCTATAAGTTAAAGGCTCCCAactctcttttttttttgcaaatatcaTACAAATATCCCCATGCAGCATTCAATATACAGGTATTTATGttgagaggagaaaaaaaactatATTCAGTGGCACATCTATTGTAACTGAAATGTTAACCAGTGACAAGTTCATCATTGACCATAATAGCATGGGACAATATGGTCAGATGTCATGTGTTGCTGTTAATTTATCCCTGTATTACAGCTTCTACAGTACGTTTGAGGATTATGTTCTAAAAACATATACTATACGATCATGTGCTCGAAATTAACCAAACTATTGCCAAGAGCTCATCTGCAGATATGAGTGTCTTGAAGAAATGAATATTTTAATAATTGGTGATATAAACAGGGTGATATATTGCTGATGTACATAGATATACATAcatgtaaatgtatttatatatttagtCAACCTATCTGTCGAATATATTTTCATAGATGTGATCCTACGTCCCCCTTGTTGCCCTCCTTAGTCCTTGTTTTGTGGTTGAGATTTTATTGATATCACTGTATCCTTTGTTAACTCGCATGGATAtattttaatataatacattatttaTGGTAATTATAATGTAATTGAAtcatagttatatacagtaccagtcaagtttggacacacctactcattccagggtttttctttatttttactattttctacattgtagaataaaagtgaagacatcaaaactatgaaataacacatatg

Function

NR:

description
sodium/potassium/calcium exchanger 3-like

GO: NA

KEGG:

id description
K13751 SLC24A3, NCKX3; solute carrier family 24 (sodium/potassium/calcium exchanger), member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021610716.2 True 5839 mRNA 0.44 17 70863113 70961979

Neighbor

gene id symbol gene type direction distance location
si:dkey-187a12.4 LOC106576974 coding downstream 5345 70851922 ~ 70857768 (-)
rin2 LOC106576973 coding downstream 22407 70772035 ~ 70840706 (-)
LOC110521978 LOC106576971 coding downstream 96618 70760735 ~ 70766495 (-)
LOC118966765 NA coding downstream 97631 70765351 ~ 70765482 (-)
slc17a5 slc17a5 coding downstream 117420 70733855 ~ 70745693 (-)
soul2 LOC106576976 coding upstream 58504 71020483 ~ 71023873 (-)
LOC110532621 LOC106577071 coding upstream 148871 71110850 ~ 71113278 (-)
fancl fancl coding upstream 302984 71263171 ~ 71282788 (-)
LOC110532628 NA coding upstream 714052 71676031 ~ 71683123 (-)
LOC118966745 NA coding upstream 846960 71808939 ~ 71808991 (-)
G78874 NA non-coding downstream 13576 70848696 ~ 70849537 (-)
G78807 NA non-coding downstream 120041 70732351 ~ 70743072 (-)
G78558 NA non-coding downstream 209149 70646124 ~ 70653964 (-)
G78419 NA non-coding downstream 504391 70358503 ~ 70358722 (-)
G78415 NA non-coding downstream 506626 70356274 ~ 70356487 (-)
G78995 NA non-coding upstream 40338 71002317 ~ 71002542 (-)
G79423 NA non-coding upstream 57600 71019579 ~ 71019802 (-)
G79432 NA non-coding upstream 70957 71032936 ~ 71033152 (-)
G79463 NA non-coding upstream 118282 71080261 ~ 71080561 (-)
G79493 NA non-coding upstream 156661 71118640 ~ 71127069 (-)
G78414 NA other downstream 507522 70354916 ~ 70355591 (-)
LOC118965321 LOC106576963 other downstream 774399 70082835 ~ 70088715 (-)
LOC110527951 coda1 other downstream 2172884 68575379 ~ 68690343 (-)
G75682 NA other downstream 2651407 68210180 ~ 68211706 (-)
sdhaf4 LOC106576700 other downstream 2701111 68157900 ~ 68162024 (-)
G79616 NA other upstream 359971 71321950 ~ 71386523 (-)
G79700 NA other upstream 507703 71469435 ~ 71470755 (-)
G79904 NA other upstream 781066 71743045 ~ 71743809 (-)
G80957 NA other upstream 1245950 72207929 ~ 72211089 (-)
LOC110528794 LOC106576993 other upstream 1286625 72202814 ~ 72251918 (-)

Expression


Co-expression Network