soul2 (LOC106576976)


Basic Information

Item Value
gene id soul2
gene name LOC106576976
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 71020483 ~ 71023873 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021610726.2
AAATTAGTCAGGCAACACCTGTTTTCTCAGAAATGTATTGTAGGTGTGTCCTGAAAATACAAAGATGGTAGAGAGTTGTTAAAATTGAAAGTGTCATCCGAGTTTAGGCAGCGACAAGATGAAGTTTCCCGAGGTAACAACGCTTCTCTCGGTTCTGGCCGTGGTGTTTTTACGCGGGGCGCACGGTTGGGATGCGCCGCCGTTTTGTCATAGCTATGATTGTCCTGAGTTCACGGTCGTTAATAAATATGAGGACTTTGAGGAACGTGCCTACCAAGTGAGCCGCTGGATAACCGTCGACAGTCAGGGTGTCTCTGACCACGACGTGAAGGCTGGATTCACGAAACTGTGGGACTACACCCAGTGGGACAATAAAGCAGGTGAACATGTCAATACTTATACCTGGCCTGCACTTATTTCTACGACTGAGGTAGAGGATGGTGGGGAGAAGcatgcatctctctctttctatgtgtCTCCAGAAGATACAGTCCTCCCCACTCCCAATGATGCCTCAATCAGGAACGAGACTATGCCTGCCTGCACCATATATGTCAGgactttCAGTGGTTTTCCGTCAGAGTACAACTTCCAGGAAAATTTGAAGAAGCTACGTGATGCCCTGACACAGGCTGGGAAAGCATTTGACTCCCACCGGTTCACCGCGGCAGGGTATGAAGGCCCGTGGACTCTGATTGGCCGACACAATGAGGTCTGGATCCACGCCGCCTGAGGAAGGCAGATGAAACTAATAAACACAGAGATTTAAAATTCCAAACAAATGTTCAATGGTGGGTACACTTGCCCATGCATATAGTGTGCGCCATTTGGAATGTTCAATTAGTACGCTATGAAAGTTGATATGTCAACTACAAAATGTCACTGGTGTATTGCCTTAAACTAAATGATTTGCTACCTCAGAATGCTGTAGCTACTTTTATCTCATCCAACCATGGCAATTTCTAAATTGGGTTGAGGGACTTCTAGTATACGTGTGAAGCCATTACTGTGTCTCATAGAAAAACATACTAGAGTTTCTTCACTTTGGGGGAGTGGCTTTCTATAGTCTTTACTagctaaatatatttttgggCACCTGTTCTGTTAATTATAATCCTTCAATCATCTAACTGTTGCAAGTCAAACAGAGCAGGTTTAGTAAAATATAGATTCAGTATTGTAATCCACAAACACAAGATGCAGTTTTTTAAACATCAATCCCTAGCATTTTATCAGCAATCTTTATTTACACTATGAATGATTTGTTCTATAAACCATTTGGTCTTTCTACTGCCACTTATATGCCTAGTCccttgtaaaatatattttgcaatCTCAATGGCCTGCTCCTGGGTAAATAAAGGTCAGATGAGAACGATAACAACATAACATGCTGTATAAGAATGTGAAGTTAGTCCACAGTCTCAGGTTAATTTTCTGCCAGAGTGATTAGAAAGCGACTGGTTGTAGGAATGTTGTGCAGCAAGTAACCTCAAAAGTACCTAGCCGCATTCTCAGAATATTCTCAATTTCCGCAAGAGATCATCACAGTAAAGACACATGAGAAGCTTACATATTATATAATCTAGTGAGGAGTGATACTTACAGATATATGTACTTTTGTACCCGCAAATTACTTTACTTATATATTAATGTAAATCAATAAAAATATAAGTATACCCAG

Function

NR:

description
heme-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021610726.2 True 1684 mRNA 0.41 4 71020483 71023873

Neighbor

gene id symbol gene type direction distance location
slc24a3 LOC106576975 coding downstream 58504 70863113 ~ 70961979 (-)
si:dkey-187a12.4 LOC106576974 coding downstream 162715 70851922 ~ 70857768 (-)
rin2 LOC106576973 coding downstream 179777 70772035 ~ 70840706 (-)
LOC110521978 LOC106576971 coding downstream 253988 70760735 ~ 70766495 (-)
LOC118966765 NA coding downstream 255001 70765351 ~ 70765482 (-)
LOC110532621 LOC106577071 coding upstream 86977 71110850 ~ 71113278 (-)
fancl fancl coding upstream 241090 71263171 ~ 71282788 (-)
LOC110532628 NA coding upstream 652158 71676031 ~ 71683123 (-)
LOC118966745 NA coding upstream 785066 71808939 ~ 71808991 (-)
bcl11aa bcl11a coding upstream 800520 71824393 ~ 71872192 (-)
G79423 NA non-coding downstream 681 71019579 ~ 71019802 (-)
G78995 NA non-coding downstream 17941 71002317 ~ 71002542 (-)
G78910 NA non-coding downstream 118271 70900815 ~ 70902212 (-)
G78855 NA non-coding downstream 143447 70823141 ~ 70877036 (-)
G78874 NA non-coding downstream 170946 70848696 ~ 70849537 (-)
G79432 NA non-coding upstream 9063 71032936 ~ 71033152 (-)
G79463 NA non-coding upstream 56388 71080261 ~ 71080561 (-)
G79493 NA non-coding upstream 94767 71118640 ~ 71127069 (-)
G79503 NA non-coding upstream 111517 71135390 ~ 71156648 (-)
G79513 NA non-coding upstream 123195 71147068 ~ 71148132 (-)
G78414 NA other downstream 664892 70354916 ~ 70355591 (-)
LOC118965321 LOC106576963 other downstream 931769 70082835 ~ 70088715 (-)
LOC110527951 coda1 other downstream 2330254 68575379 ~ 68690343 (-)
G75682 NA other downstream 2808777 68210180 ~ 68211706 (-)
sdhaf4 LOC106576700 other downstream 2858481 68157900 ~ 68162024 (-)
G79616 NA other upstream 298077 71321950 ~ 71386523 (-)
G79700 NA other upstream 445809 71469435 ~ 71470755 (-)
G79904 NA other upstream 719172 71743045 ~ 71743809 (-)
G80957 NA other upstream 1184056 72207929 ~ 72211089 (-)
LOC110528794 LOC106576993 other upstream 1224731 72202814 ~ 72251918 (-)

Expression


Co-expression Network