LOC110528637


Basic Information

Item Value
gene id LOC110528637
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 71280461 ~ 71323276 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002474288.2
CCAATAAGACATCTGTCTCTGTTTCAATTTACATACGCATTGTCACAACATGTGGCATGAATCCCCTCTCCCGAATGCCAAATATGTCATTACAATTCCTATTCAAATCCAATCAAACCATGATTACTACAAAAGCCCCCGTATTGCCGTGCTCCTATATGCAGGTTTGAGGCTTAGCTCCCTTTAAGCAAATATTTATCCCTCCAGCCAGGATGActttattgcagtttgtgattataTATGGGTCTGTGAGAGGAGTGTCAACCGTGCATGCTCCACAATGTGCCTGGAGAGATTGATGTTTTGTCATCCACCTGCTTCAAAGCTGTAAAACCCGGGAGGCAGCAGCAAACGGAGAGACCTACCCAGCccggaaaaaaacaaacaaagagAGACCTTACTGGTGCTGTTTACACATCTGTGTGGAGGACTATCTGGGCTTGTGTGTTTTGACATCGCGCTCAAATGGCTGCACGGCTCCTGTCTCAGTGAAACGGAAGATGTAGAGGAGCTGAATGCTGGAGAGTGAGTGAAGGAGTGAAGCTGAGCCCTGGACGGAGGGATCTgctggaggaaaggagagagagagTGTCGGCTGAACTGGGCCACAGCATCCGAGCTGGGAGACCTgagagaagagatgggagagggcgGCTCCGCTGACTGGAGGAGTACCAGCTGGTCTCAAACAGGTAGGGAGCCGTGCCAAGTCCCTGTGCCAGCGTCTGTCGTGCCCGCTGACGTTCGTCGTCTGTTGGCTTCCAtcagggcctctctctctctctgatctggaATGAAGATGATTTGATTAGACCTCTGGTAAAGGCTGGGCAGGCCCTATACAAAGTCATTAGGATGGCCAGGAGTGGACTGGGGTGTTACGGGTGAGTAGTGGGTGACCGCAGCGGACTCACATTTGCACTGGACTGTTAGTTAAAatgttgtgtgtctgtgcatgtgtgtgtatgcaccttTTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002474288.2 True 979 mRNA 0.50 3 71280461 71323276
Loading

Neighbor

gene id symbol gene type direction distance location
vrk2 LOC106576978 coding upstream 14431 71248102 ~ 71266030 (+)
ccdc85a ccdc85a coding upstream 204222 71036440 ~ 71076239 (+)
ddx43 ddx43 coding upstream 568983 70679883 ~ 70711478 (+)
kcnq5a LOC106576968 coding upstream 603270 70555702 ~ 70677281 (+)
LOC110528470 LOC106576965 coding upstream 875838 70229959 ~ 70404623 (+)
asrgl1 LOC106576984 coding downstream 641514 71964790 ~ 71978789 (+)
LOC110528701 LOC106576988 coding downstream 685231 72008507 ~ 72040224 (+)
tp53bp2a NA coding downstream 793406 72116682 ~ 72167413 (+)
LOC110532645 NA coding downstream 899041 72222317 ~ 72239625 (+)
LOC118965495 NA coding downstream 905274 72227445 ~ 72229153 (+)
G79091 NA non-coding upstream 126520 71115298 ~ 71153941 (+)
G79094 NA non-coding upstream 152988 71119139 ~ 71127473 (+)
G79063 NA non-coding upstream 198536 71081670 ~ 71081925 (+)
G79061 NA non-coding upstream 200575 71079627 ~ 71079886 (+)
G79037 NA non-coding upstream 230711 71046714 ~ 71049750 (+)
G79270 NA non-coding downstream 85065 71408341 ~ 71408790 (+)
G79286 NA non-coding downstream 115644 71438920 ~ 71439504 (+)
G79305 NA non-coding downstream 142582 71465858 ~ 71466257 (+)
G79778 NA non-coding downstream 294584 71617860 ~ 71618116 (+)
G79779 NA non-coding downstream 295991 71619267 ~ 71619497 (+)
G78121 NA other upstream 625500 70571665 ~ 70654961 (+)
G75747 NA other upstream 2905532 68374505 ~ 68374929 (+)
G74139 NA other upstream 4495492 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 4521477 66756207 ~ 66758984 (+)
G82111 LOC106577091 other downstream 2228340 73551616 ~ 73571737 (+)
G83836 NA other downstream 3585949 74909225 ~ 74909806 (+)
G83829 NA other downstream 3789384 75112660 ~ 75114190 (+)
G83979 NA other downstream 3821588 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 5134848 76457821 ~ 76459823 (+)

Expression

LOC110528637 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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LOC110528637 Expression in each Bioproject

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LOC110528637 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
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Co-expression Network