Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966745 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 71808939 ~ 71808991 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053622.1 | True | 53 | mRNA | 0.47 | 1 | 71808939 | 71808991 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532628 | NA | coding | downstream | 125816 | 71676031 ~ 71683123 (-) |
| fancl | fancl | coding | downstream | 526151 | 71263171 ~ 71282788 (-) |
| LOC110532621 | LOC106577071 | coding | downstream | 695661 | 71110850 ~ 71113278 (-) |
| soul2 | LOC106576976 | coding | downstream | 785066 | 71020483 ~ 71023873 (-) |
| slc24a3 | LOC106576975 | coding | downstream | 846960 | 70863113 ~ 70961979 (-) |
| bcl11aa | bcl11a | coding | upstream | 15402 | 71824393 ~ 71872192 (-) |
| LOC110528651 | LOC106607091 | coding | upstream | 87233 | 71896224 ~ 71961729 (-) |
| LOC110528682 | LOC106576986 | coding | upstream | 185819 | 71994810 ~ 72001260 (-) |
| smap1 | LOC106576989 | coding | upstream | 232922 | 72041913 ~ 72104027 (-) |
| LOC110528822 | clm1 | coding | upstream | 367424 | 72176415 ~ 72193773 (-) |
| G79973 | NA | non-coding | downstream | 9519 | 71799221 ~ 71799420 (-) |
| G79968 | NA | non-coding | downstream | 13630 | 71795109 ~ 71795309 (-) |
| G79961 | NA | non-coding | downstream | 21879 | 71782923 ~ 71787060 (-) |
| G79894 | NA | non-coding | downstream | 72653 | 71736068 ~ 71736286 (-) |
| G79888 | NA | non-coding | downstream | 79894 | 71728841 ~ 71729045 (-) |
| G80145 | NA | non-coding | upstream | 27107 | 71836098 ~ 71836324 (-) |
| G80146 | NA | non-coding | upstream | 28538 | 71837529 ~ 71837773 (-) |
| G80148 | NA | non-coding | upstream | 32329 | 71841320 ~ 71841569 (-) |
| G80190 | NA | non-coding | upstream | 118515 | 71927506 ~ 71961318 (-) |
| G80915 | NA | non-coding | upstream | 315686 | 72124677 ~ 72124890 (-) |
| G79904 | NA | other | downstream | 65130 | 71743045 ~ 71743809 (-) |
| G79700 | NA | other | downstream | 338480 | 71469435 ~ 71470755 (-) |
| G79616 | NA | other | downstream | 422416 | 71321950 ~ 71386523 (-) |
| G78414 | NA | other | downstream | 1453348 | 70354916 ~ 70355591 (-) |
| LOC118965321 | LOC106576963 | other | downstream | 1720225 | 70082835 ~ 70088715 (-) |
| G80957 | NA | other | upstream | 398938 | 72207929 ~ 72211089 (-) |
| LOC110528794 | LOC106576993 | other | upstream | 439613 | 72202814 ~ 72251918 (-) |
| G83429 | NA | other | upstream | 2763456 | 74572447 ~ 74572789 (-) |
| fank1 | fank1 | other | upstream | 3163221 | 74971772 ~ 74975108 (-) |
| G84713 | NA | other | upstream | 3719352 | 75528343 ~ 75528903 (-) |
