XLOC_019802


Basic Information

Item Value
gene id XLOC_019802
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 39923770 ~ 39924444 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039260
TTCAAAATGGCATGACAAGATATTGTTTTCGTAGTAGTTGAATTGCAAAATATTGTTGCAATTATTTTATGAGAACCCCATAAAAGCTGTTTATTGTTGGAGAATCTGCTTTTATGGGTGTTATATTtagcaagtaaaagtaaaagattGGCAAAAGATTGCTTTCTCGGTGTTATTGTCTGTAACACAACAATACAAGCgttcaaaacaaagaaaaacgcGTTACGTCACAATTTGAGTCGACGTAAGGGCATGTTGGGCCAATCAGTGTAGGAAAACGGGAGACTGTGGGCGGGGTGTCTCTTCCACAGGGAGCGGTCCGCCAAATTCAAACAGCCACTCGAAAACAAAGTAAAGGACAGTCGGCTTTCCAGAATCTGCGTATTGGGAAAAGAAGGGTTTGGGCGTTAACTTTTCAGAGAAACGTGTTCTGCTTTCCTTCACTCAGTCATGTTACAGGAGACAGTAAGTAAACTGTTAAAGCTAACTGTTAGAGAGTAAGGGTTTAGTATCGTTTTATATACATTTTGCACTAATTTTGCCAGGTTGTTTATTATTTCACACTGCAAGGAAACATGaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039260 True 580 lncRNA 0.39 2 39923770 39924444

Neighbor

gene id symbol gene type direction distance location
XLOC_019801 NA coding downstream 11663 39905903 ~ 39912107 (-)
XLOC_019800 rskrb coding downstream 253395 39645762 ~ 39670375 (-)
XLOC_019799 aldocb coding downstream 283816 39608637 ~ 39639954 (-)
XLOC_019798 pigs coding downstream 319142 39583458 ~ 39604628 (-)
XLOC_019797 srsf1b coding downstream 346253 39567505 ~ 39577517 (-)
XLOC_019803 tmigd1 coding upstream 935 39925379 ~ 39931400 (-)
XLOC_019804 slc47a2.1 coding upstream 67707 39992151 ~ 40015530 (-)
XLOC_019805 BX248108.1 coding upstream 96819 40021263 ~ 40040178 (-)
XLOC_019806 med31 coding upstream 120780 40045224 ~ 40049642 (-)
XLOC_019807 slc13a5a coding upstream 129222 40053666 ~ 40083567 (-)
XLOC_019794 NA non-coding downstream 561594 39359151 ~ 39362176 (-)
XLOC_019793 NA non-coding downstream 586674 39328103 ~ 39337096 (-)
XLOC_019791 CU442763.1 non-coding downstream 656464 39267225 ~ 39267306 (-)
XLOC_019782 NA non-coding downstream 1290863 38629308 ~ 38632907 (-)
XLOC_019814 NA non-coding upstream 604343 40528787 ~ 40579807 (-)
XLOC_019825 CU570984.1 non-coding upstream 1326987 41251431 ~ 41251548 (-)
XLOC_019828 CABZ01034722.1 non-coding upstream 1427101 41351545 ~ 41351665 (-)
XLOC_019831 NA non-coding upstream 1666426 41590870 ~ 41593163 (-)
XLOC_019838 NA non-coding upstream 2119530 42043974 ~ 42048805 (-)

Expression


Co-expression Network