plek (LOC106577000)


Basic Information

Item Value
gene id plek
gene name LOC106577000
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 72612186 ~ 72618218 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611063.2
TCTTAGTCTGTGGTCAGATGACGACGGATAACCCATAATCTCACTGGATTAATCCAAATGAATAGAAGATGATGGAATAATCTTCCCATGAATCTTACAGGGCACAGTGTTGAATTCGTGGAAGGTGGTGtgggtggtgttgtctgatgatgGTGTGGAGTTCTTCAAGAGAAAGGCAGACAGTGCCCCCAAAGGAATGATCCCACTGaagggagctgttctgaccagcCCCTGTCAGGACTTCAGCAAGAGGGCGCTGGTTTTTAAGCTCAGCACGGCCAAGAACCAGGACCATTTCTTCCAGGCCACccacctggaggagagagagtcctGGGTGAAGGACATCAAGAGGGCCATCACCTGTCTGCAGGGGGGTGTAAAGTTTGCCAGGAAGTCGACACGGAGGTCCATTCGCCTCCCCGATACCATCAACCTCAGTGAGCTATGTATTCTAATGAGAGACCAGGAGAATGGGGTCAAAGAGCAGAAGCTGGAAAAGGAGAAAAGAGTCTACAATCACTGCTTCACAGGTGGTACGGTGGTGGACTGGCTGATCTCTAAGGACAAGGCCAGGAACAGGCCTGAGGCTCTGATGTTGGCTACAGGACTCCTGAACGAAGGATTCTTACAGCCCGCAGGGGACGTGTCCAAACAGGGGGTCGAGGGAGGGACAGTGTCCACCGTCCTCGATGAGCCAAATGCACTCTACTACTTTGCAGACAGTGGGTTCTTCTGTGAAGGCTACTCCAGTGATGAAGACGTGATTGTGAAGGAGGAGTTCAGGGGTAACATCGTAAAACAGGGCTGCTTACTCAAACAGGGACATCGGAGGAAAAACTGGAAGGTGCGGAAATTCATCCTCCGGAACGATCCTGCTTATATTCACTATTACGACCCCACCAAGGGTGATGAGTACCCTCTGGGCTCTATCCACCTGCGAGGGTCTGTGATAACAGCGGTGGAGTTTGTTCCTGATGCCAAGAGGTATGATGTTGATGGGAATCTCTTTGAGATCATCACTTCAGACGAGACACACTATTTTCTCCAAGCGGCTACATctgaggagaggaaggagtggatCAAAGCCATCCACACTGTGTCAAAAACCGGAAAATAATCACAACAGGAACCATAGCTACTCTTAACACCTCACATGAAGGGATATGGAATATGGATGGACATGTTCAAAACATTGTTGCAGAGCCAGAAGGAATCCGAACCGATCTGATCTGAACGATCCTAAACTCTGCTTTTAAGGTTATTTCAAGAGTTTTAGGTTTGATATTGTATTTATGTTGAGGGATTATGAATTTCCTCTTCATATAGATCAAATGCTCCCTCACTTGCTTTTCAACATTCAACATAATGTGGAGGCACTCTCACCTTTATATATATTTATCACAGGCAGGCTGTGAAGAAGCGTGCAATGATCTCTGTGTAGAAAGGTGTGAAGTTCTGCAATGGCTTCTGGTGTGGCCTTCTGCTTTTCCTTCCAGCTGCCTGACAGAAATCATTGTCTTACATCAGATAGCTTGTCGATTTTGCCTGCACCGGTTGAGGGACGAGTGTCACGGAGGTTTGAAGCCATCTGACTTGAGACAATAGTGAAAAATAGGACAGTTCGAAGAATCTCAACATTCCAGCCAGTTCCTATGACCAAACAAACACTTATCATATCCTGCAAATAATTTCCGAATTCGGAGGACCCGTCACTGTGGTTTTCATGATGTTTCTAACTCATATCACTTGATGTACACATGGTCTCTGCACTGGCTGGATGTGGCTGTGTACTATCTCCATTGTCTGTCAAAAAGCCATTACGATTCTTTGTTCCACAgttttacacatgttaaataaaGATCTACTCTTTGTC
>XM_021611054.2
TTCAACTTCCACTATTTCTATGACCACACAACACTGTAGGTCATATGTGAGGGGGTTGAGTGTTCCTCTTGTGTCTGCATCAGTTACTCAGACACAGACACCAGCAGCTAGAGGTCATGGAGCCAAAACAGATCAAAGAGGGATATCTGGTCAAAAAGGGCACAGTGTTGAATTCGTGGAAGGTGGTGtgggtggtgttgtctgatgatgGTGTGGAGTTCTTCAAGAGAAAGGCAGACAGTGCCCCCAAAGGAATGATCCCACTGaagggagctgttctgaccagcCCCTGTCAGGACTTCAGCAAGAGGGCGCTGGTTTTTAAGCTCAGCACGGCCAAGAACCAGGACCATTTCTTCCAGGCCACccacctggaggagagagagtcctGGGTGAAGGACATCAAGAGGGCCATCACCTGTCTGCAGGGGGGTGTAAAGTTTGCCAGGAAGTCGACACGGAGGTCCATTCGCCTCCCCGATACCATCAACCTCAGTGAGCTATGTATTCTAATGAGAGACCAGGAGAATGGGGTCAAAGAGCAGAAGCTGGAAAAGGAGAAAAGAGTCTACAATCACTGCTTCACAGGTGGTACGGTGGTGGACTGGCTGATCTCTAAGGACAAGGCCAGGAACAGGCCTGAGGCTCTGATGTTGGCTACAGGACTCCTGAACGAAGGATTCTTACAGCCCGCAGGGGACGTGTCCAAACAGGGGGTCGAGGGAGGGACAGTGTCCACCGTCCTCGATGAGCCAAATGCACTCTACTACTTTGCAGACAGTGGGTTCTTCTGTGAAGGCTACTCCAGTGATGAAGACGTGATTGTGAAGGAGGAGTTCAGGGGTAACATCGTAAAACAGGGCTGCTTACTCAAACAGGGACATCGGAGGAAAAACTGGAAGGTGCGGAAATTCATCCTCCGGAACGATCCTGCTTATATTCACTATTACGACCCCACCAAGGGTGATGAGTACCCTCTGGGCTCTATCCACCTGCGAGGGTCTGTGATAACAGCGGTGGAGTTTGTTCCTGATGCCAAGAGGTATGATGTTGATGGGAATCTCTTTGAGATCATCACTTCAGACGAGACACACTATTTTCTCCAAGCGGCTACATctgaggagaggaaggagtggatCAAAGCCATCCACACTGTGTCAAAAACCGGAAAATAATCACAACAGGAACCATAGCTACTCTTAACACCTCACATGAAGGGATATGGAATATGGATGGACATGTTCAAAACATTGTTGCAGAGCCAGAAGGAATCCGAACCGATCTGATCTGAACGATCCTAAACTCTGCTTTTAAGGTTATTTCAAGAGTTTTAGGTTTGATATTGTATTTATGTTGAGGGATTATGAATTTCCTCTTCATATAGATCAAATGCTCCCTCACTTGCTTTTCAACATTCAACATAATGTGGAGGCACTCTCACCTTTATATATATTTATCACAGGCAGGCTGTGAAGAAGCGTGCAATGATCTCTGTGTAGAAAGGTGTGAAGTTCTGCAATGGCTTCTGGTGTGGCCTTCTGCTTTTCCTTCCAGCTGCCTGACAGAAATCATTGTCTTACATCAGATAGCTTGTCGATTTTGCCTGCACCGGTTGAGGGACGAGTGTCACGGAGGTTTGAAGCCATCTGACTTGAGACAATAGTGAAAAATAGGACAGTTCGAAGAATCTCAACATTCCAGCCAGTTCCTATGACCAAACAAACACTTATCATATCCTGCAAATAATTTCCGAATTCGGAGGACCCGTCACTGTGGTTTTCATGATGTTTCTAACTCATATCACTTGATGTACACATGGTCTCTGCACTGGCTGGATGTGGCTGTGTACTATCTCCATTGTCTGTCAAAAAGCCATTACGATTCTTTGTTCCACAgttttacacatgttaaataaaGATCTACTCTTTGTC

Function

NR:

description
pleckstrin-like isoform X1

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process

KEGG:

id description
K19993 PLEK; pleckstrin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611063.2 False 1873 mRNA 0.47 9 72612186 72617587
XM_021611054.2 True 1931 mRNA 0.47 9 72612186 72618218

Neighbor

gene id symbol gene type direction distance location
LOC110532660 LOC107688027 coding downstream 4564 72606735 ~ 72607622 (-)
LOC110532653 bfsp1 coding downstream 86465 72508958 ~ 72525721 (-)
LOC110528856 gtpbp2 coding downstream 256405 72330335 ~ 72355781 (-)
LOC118965494 LOC106576993 coding downstream 330942 72276698 ~ 72281244 (-)
LOC110528758 NA coding downstream 342652 72260084 ~ 72269534 (-)
LOC110528940 LOC106577088 coding upstream 516435 73134648 ~ 73136850 (-)
LOC110528926 LOC106577002 coding upstream 522246 73140464 ~ 73290110 (-)
LOC110528949 LOC106577006 coding upstream 705234 73323452 ~ 73373737 (-)
LOC110529015 LOC106577089 coding upstream 928880 73547098 ~ 73548953 (-)
sfr1 sfr1 coding upstream 1019417 73637635 ~ 73639525 (-)
G81145 NA non-coding downstream 79485 72492727 ~ 72532701 (-)
G81127 NA non-coding downstream 96019 72468844 ~ 72516167 (-)
G81120 pcsk2 non-coding downstream 104120 72483794 ~ 72508066 (-)
G81119 NA non-coding downstream 153544 72453408 ~ 72458642 (-)
G81095 NA non-coding downstream 183880 72427995 ~ 72428306 (-)
G81275 NA non-coding upstream 98311 72716529 ~ 72759729 (-)
G81277 NA non-coding upstream 99268 72717486 ~ 72718244 (-)
G81524 NA non-coding upstream 473315 73091533 ~ 73091739 (-)
G81530 NA non-coding upstream 476224 73094442 ~ 73094714 (-)
G81565 NA non-coding upstream 500631 73118849 ~ 73119103 (-)
LOC110528794 LOC106576993 other downstream 360268 72202814 ~ 72251918 (-)
G80957 NA other downstream 401097 72207929 ~ 72211089 (-)
G79904 NA other downstream 868377 71743045 ~ 71743809 (-)
G79700 NA other downstream 1141727 71469435 ~ 71470755 (-)
G79616 NA other downstream 1225663 71321950 ~ 71386523 (-)
G83429 NA other upstream 1954229 74572447 ~ 74572789 (-)
fank1 fank1 other upstream 2353994 74971772 ~ 74975108 (-)
G84713 NA other upstream 2910125 75528343 ~ 75528903 (-)
G85866 NA other upstream 3715250 76333468 ~ 76334136 (-)
ccser2a ccser2 other upstream 3749075 76324531 ~ 76399997 (-)

Expression


Co-expression Network