Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110528917 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 72999236 ~ 73000231 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002474314.2 | True | 465 | mRNA | 0.47 | 2 | 72999236 | 73000231 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prokr1b | LOC106577087 | coding | upstream | 438177 | 72545613 ~ 72561059 (+) |
| pcsk2 | pcsk2 | coding | upstream | 491103 | 72419949 ~ 72508133 (+) |
| LOC110528865 | otor | coding | upstream | 627457 | 72370213 ~ 72371779 (+) |
| polh | polh | coding | upstream | 674896 | 72312142 ~ 72324340 (+) |
| LOC118965495 | NA | coding | upstream | 770085 | 72227445 ~ 72229153 (+) |
| LOC110528965 | LOC106577007 | coding | downstream | 385797 | 73386028 ~ 73398995 (+) |
| LOC110528975 | LOC106577008 | coding | downstream | 400616 | 73400847 ~ 73418442 (+) |
| LOC110528986 | LOC106577009 | coding | downstream | 432822 | 73433053 ~ 73450455 (+) |
| LOC110529004 | LOC106577010 | coding | downstream | 478057 | 73478288 ~ 73485148 (+) |
| LOC110529026 | LOC106577090 | coding | downstream | 551387 | 73551618 ~ 73553748 (+) |
| G80480 | NA | non-coding | upstream | 564039 | 72430413 ~ 72435197 (+) |
| G80417 | NA | non-coding | upstream | 646973 | 72344640 ~ 72352263 (+) |
| G80416 | NA | non-coding | upstream | 653608 | 72333853 ~ 72345628 (+) |
| G80413 | NA | non-coding | upstream | 666657 | 72326404 ~ 72332579 (+) |
| G80326 | NA | non-coding | upstream | 731709 | 72250641 ~ 72267527 (+) |
| G81519 | NA | non-coding | downstream | 87988 | 73088219 ~ 73088486 (+) |
| G81531 | NA | non-coding | downstream | 94535 | 73094766 ~ 73094997 (+) |
| G81547 | NA | non-coding | downstream | 104250 | 73104481 ~ 73104814 (+) |
| G81566 | NA | non-coding | downstream | 119017 | 73119248 ~ 73119474 (+) |
| G81568 | NA | non-coding | downstream | 120212 | 73120443 ~ 73121479 (+) |
| ccdc85a | ccdc85a | other | upstream | 1923134 | 71036440 ~ 71076239 (+) |
| G78121 | NA | other | upstream | 2344275 | 70571665 ~ 70654961 (+) |
| G75747 | NA | other | upstream | 4624307 | 68374505 ~ 68374929 (+) |
| G74139 | NA | other | upstream | 6214267 | 66784335 ~ 66784969 (+) |
| G74067 | LOC106576735 | other | upstream | 6240252 | 66756207 ~ 66758984 (+) |
| G82111 | LOC106577091 | other | downstream | 551385 | 73551616 ~ 73571737 (+) |
| G83836 | NA | other | downstream | 1908994 | 74909225 ~ 74909806 (+) |
| G83829 | NA | other | downstream | 2112429 | 75112660 ~ 75114190 (+) |
| G83979 | NA | other | downstream | 2144633 | 75144864 ~ 75145512 (+) |
| LOC110529610 | NA | other | downstream | 3457893 | 76457821 ~ 76459823 (+) |
