LOC110528986 (LOC106577009)


Basic Information

Item Value
gene id LOC110528986
gene name LOC106577009
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 73433053 ~ 73450455 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611153.2
GCCGACTACAAAAAACGTAAATTGACAATACACTGACTACGATATAAAACTTATGCAAATAAATAGCTATTCTGAGAATCAACAATTATTTATTTGATAGGAAGAAAGTGTTTTTGATTTCGCTCTAGAACTATATATTTGCGGCGGTAggatatttattttaaaaacctAGCCTGCTCTACATTTTCTTCCTCCGTTGGAAGCCATGATGGAAGCTTGAGAATTCAGCTGGAGAGAAACGCGAAAAGATGGTCCCCAGGACATAGCTATCTGTCAGACGAATCTGTGCTCATATTTGATCCCTGTATAGACAATATAAATGCACGGTGGAGCCTGTCACTTTTTCCCGGTGTAGTTTAGCAAATAATTCACGACGATGTTGATTCGCTAGGAGGTTTTTTGATTAAAAAAAGggggtaacgttagctagctagttactatactgtagcttgctaacgttagctacgaGTGGATACTGTTGCTGTCCTTTCCGAGAGTAACATTATTCTTCAAATTCGAGCGCCGGAGAGTTTTCTCTCCTCGCTGTCCGGTCAATCACGGCGGCTACTGTAGATCAAGAGGTTCGGACCGTCTCTTATACCATACGGTTAGGCGGGAGGAGAATTGTATGTATTTTTCAGGGGGGATTTGAAAACAAATTCCAGGATTGGGAAAGTTGGGCCTGCGTGGAGGAGCAGAGCAAGGCCCGTCTTTATGATCCAGAGAAGACATTCTAGTTAGCTAGTTAATCCTACTCACAACGACTACCACTGCTAGCTTTGCTAGCTTGTCATTGCGAGAAAGGAGCTGCAAAATCAAAAGCGCAAAGGGCGAGCGAGAGGCAAATCAAGCGAAAGCAACGATACTTTTTCATAAATAGACTCCTGTCACTAAGTTAGCTACAATGGCTTCGAAGATAAAATTAATGGTCAGCCGGAACAAAAGGAGATTCCAAGAGGATGGGTTCGACTTGGATTTAACGTATATCTATCCAAACATCATTGCTATGGGCTTTCCTGCAGAGCGACTCGAAGGAGTGTACAGAAACAATATAGACGAGGTTGTACGGTTTCTTGACTCGAAACATAAAAACCATTATAAGATTTACAATCTTTGTGCAGAACGACACTACGATGCTGCCAAATTTAACTGCAGAGTTGCACAATACCCCTTTGAAGACCACAACCCGCCTCAGCTAGAGCTCATCAAGCCGTTCTGTGAAGACCTCGACCAGTGGCTGAGCGAGGATGACAATCATGTGGCGGCCATCCACTGCAAGGCAGGGAAAGGCCGCACCGGGGTGATGATCTGCGCCTACCTCCTGCACCGTGGCAAGTTCCAGGACGCCCAGGAGGCACTCGACTTCTATGGGGAAGTGCGGACAAGGGACAAGAAGGGAGTGACGATCCCAAGCCAACGGCGCTACGTGTACTACTATAGCCACCTGCTGAAAAACAAGCTGGACTACAAGCCTGTGGCTCTCCTCTTCCACAAAATGGTGTTTGAGACGCTACCAATGTTCAGTGGAGGCACCTGCAATCCTCAGTTTGTGGTGTATCAACTTAAAGTCAAGATCCACACATCCAACCCGGCTCACACGCGGAGGGAAGAAAAGCACATGTTATTTGAGTTTCCCCAGCCGCTGCCCGTCTGTGGAGACGTCAAAGTGGAGTTCTTTCACAAGCAAAACAAAATGATGAAGAAGGATAAGATGTTCCACTTCTGGGTTAACACCTTCTTCATCCCCGGGCCACCGGAGGAGAGCATGGAGAAGGTGGAGAACGGGTCGGTGGTGGTGAACGATGTGGACGGGGTTCAGAACCAGTCCACGATTGGCACCCCTCCCCAGGCCCCGCAGAGTTCCGAACGCAGGGACAGCGGCAGGGACAGCGACAGGGACTACCTCATCCTCGCGCTCACCAAGAATGACCTGGACAAGGCCAACAAAGACAAAGCTAACCGCTACTTCTCACCTAATTTCAAGGTGAAGTTGTATTTCACGAAAACCGTGGAAGATTCTTCGAATTCCGAGGCGAGCACTTCGACATCTGTCACTCCAGACGTTAGTGACAACGAGCCAGACCATTATCGATATTCTGACACCACTGACTCTGATCCGGAAAACGAACCTTTTGATGAGGAGCAGCACACGCAGATCACGAAAGTGTGAACTCTTACTTTTTTTTATAGGAACACGAAGAAAAAGATATGTACACCAGAGAAAAAAAGGAGCAAACTTGAATATGAACTCAAAAGAAGAACCTTTGTTCCCCTGCTTCCCCCAAAACGGCAGCAGAGCATCATGTCAAATGCCAATTttaaaagaaaaaaataatattctGACCAATATATTGTTTTTAGGACTCTTTTCTTTGGCACGGCCATGTACCATGCGCGAGGTATTGACGTTGTTGGGGGAAGGTGCTGTAGCTGtaatgtttatatatatacacatacatacatacatacatacatatgtaaaCAAACTTTTTGGTGTCATAGACAATGGAAAAGAGTAACAATCAGGAGGACTATGCTGCTCCTTCTCCTGTCGAAACCAAGGCCAGTGCTGCAGTCACTTTGTTTATTTTcccgtcttctctccctccctcttctcttctaccCCCTTCACCACACCTCTTCCCTCATCCTCCTTTACTGTGAATGCTTCTCGTGCTCTTTGCAAGCTGTCTCACACGACGATTACCTTTGGCCTTTGTGCAGTGGAAGCTGCATGCAGGCAATGGGTTGGGGGCGGGGCTGGGTTATGAGTCTGTGATGTCTAAAGCGTTGCCATTCCTTTCCGTACTGTTTAAATTATGCAGAACAAGGCATCCTATGTAATTgtcagttttttttaaaatcctaaaataataaaaatataataCACAAAACAGCAGGGAGACAAGTGTTTGCAATGTCAACACTTTATATACATTTAAAGAACCGTGGCGGTATGCATGTATTGGAATTTAGCACCCATCCCTAATAAATGTATGCAATGTCATCCTTTCTTAGA
>XM_021611148.2
CGACTACAAAAAACGTAAATTGACAATACACTGACTACGATATAAAACTTATGCAAATAAATAGCTATTCTGAGAATCAACAATTATTTATTTGATAGGAAGAAAGTGTTTTTGATTTCGCTCTAGAACTATATATTTGCGGCGGTAggatatttattttaaaaacctAGCCTGCTCTACATTTTCTTCCTCCGTTGGAAGCCATGATGGAAGCTTGAGAATTCAGCTGGAGAGAAACGCGAAAAGATGGTCCCCAGGACATAGCTATCTGTCAGACGAATCTGTGCTCATATTTGATCCCTGTATAGACAATATAAATGCACGGTGGAGCCTGTCACTTTTTCCCGGTGTAGTTTAGCAAATAATTCACGACGATGTTGATTCGCTAGGAGGTTTTTTGATTAAAAAAAGggggtaacgttagctagctagttactatactgtagcttgctaacgttagctacgaGTGGATACTGTTGCTGTCCTTTCCGAGAGTAACATTATTCTTCAAATTCGAGCGCCGGAGAGTTTTCTCTCCTCGCTGTCCGGTCAATCACGGCGGCTACTGTAGATCAAGAGGTTCGGACCGTCTCTTATACCATACGGTTAGGCGGGAGGAGAATTGTATGTATTTTTCAGGGGGGATTTGAAAACAAATTCCAGGATTGGGAAAGTTGGGCCTGCGTGGAGGAGCAGAGCAAGGCCCGTCTTTATGATCCAGAGAAGACATTCTAGTTAGCTAGTTAATCCTACTCACAACGACTACCACTGCTAGCTTTGCTAGCTTGTCATTGCGAGAAAGGAGCTGCAAAATCAAAAGCGCAAAGGGCGAGCGAGAGGCAAATCAAGCGAAAGCAACGATACTTTTTCATAAATAGACTCCTGTCACTAAGTTAGCTACAATGGCTTCGAAGATAAAATTAATGGTCAGCCGGAACAAAAGGAGATTCCAAGAGGATGGGTTCGACTTGGATTTAACGTATATCTATCCAAACATCATTGCTATGGGCTTTCCTGCAGAGCGACTCGAAGGAGTGTACAGAAACAATATAGACGAGGTTGTACGGTTTCTTGACTCGAAACATAAAAACCATTATAAGATTTACAATCTTTGTGCAGAACGACACTACGATGCTGCCAAATTTAACTGCAGAGTTGCACAATACCCCTTTGAAGACCACAACCCGCCTCAGCTAGAGCTCATCAAGCCGTTCTGTGAAGACCTCGACCAGTGGCTGAGCGAGGATGACAATCATGTGGCGGCCATCCACTGCAAGGCAGGGAAAGGCCGCACCGGGGTGATGATCTGCGCCTACCTCCTGCACCGTGGCAAGTTCCAGGACGCCCAGGAGGCACTCGACTTCTATGGGGAAGTGCGGACAAGGGACAAGAAGGGAGTGACGATCCCAAGCCAACGGCGCTACGTGTACTACTATAGCCACCTGCTGAAAAACAAGCTGGACTACAAGCCTGTGGCTCTCCTCTTCCACAAAATGGTGTTTGAGACGCTACCAATGTTCAGTGGAGGCACCTGCAgggACAGTACCGTTAAAAACAGGAGCGAGCCGATCCCTCTGGGCTTCAAGAAAGGGAATTGGCATTGGGATCCTCAGTTTGTGGTGTATCAACTTAAAGTCAAGATCCACACATCCAACCCGGCTCACACGCGGAGGGAAGAAAAGCACATGTTATTTGAGTTTCCCCAGCCGCTGCCCGTCTGTGGAGACGTCAAAGTGGAGTTCTTTCACAAGCAAAACAAAATGATGAAGAAGGATAAGATGTTCCACTTCTGGGTTAACACCTTCTTCATCCCCGGGCCACCGGAGGAGAGCATGGAGAAGGTGGAGAACGGGTCGGTGGTGGTGAACGATGTGGACGGGGTTCAGAACCAGTCCACGATTGGCACCCCTCCCCAGGCCCCGCAGAGTTCCGAACGCAGGGACAGCGGCAGGGACAGCGACAGGGACTACCTCATCCTCGCGCTCACCAAGAATGACCTGGACAAGGCCAACAAAGACAAAGCTAACCGCTACTTCTCACCTAATTTCAAGGTGAAGTTGTATTTCACGAAAACCGTGGAAGATTCTTCGAATTCCGAGGCGAGCACTTCGACATCTGTCACTCCAGACGTTAGTGACAACGAGCCAGACCATTATCGATATTCTGACACCACTGACTCTGATCCGGAAAACGAACCTTTTGATGAGGAGCAGCACACGCAGATCACGAAAGTGTGAACTCTTACTTTTTTTTATAGGAACACGAAGAAAAAGATATGTACACCAGAGAAAAAAAGGAGCAAACTTGAATATGAACTCAAAAGAAGAACCTTTGTTCCCCTGCTTCCCCCAAAACGGCAGCAGAGCATCATGTCAAATGCCAATTttaaaagaaaaaaataatattctGACCAATATATTGTTTTTAGGACTCTTTTCTTTGGCACGGCCATGTACCATGCGCGAGGTATTGACGTTGTTGGGGGAAGGTGCTGTAGCTGtaatgtttatatatatacacatacatacatacatacatacatatgtaaaCAAACTTTTTGGTGTCATAGACAATGGAAAAGAGTAACAATCAGGAGGACTATGCTGCTCCTTCTCCTGTCGAAACCAAGGCCAGTGCTGCAGTCACTTTGTTTATTTTcccgtcttctctccctccctcttctcttctaccCCCTTCACCACACCTCTTCCCTCATCCTCCTTTACTGTGAATGCTTCTCGTGCTCTTTGCAAGCTGTCTCACACGACGATTACCTTTGGCCTTTGTGCAGTGGAAGCTGCATGCAGGCAATGGGTTGGGGGCGGGGCTGGGTTATGAGTCTGTGATGTCTAAAGCGTTGCCATTCCTTTCCGTACTGTTTAAATTATGCAGAACAAGGCATCCTATGTAATTgtcagttttttttaaaatcctaaaataataaaaatataataCACAAAACAGCAGGGAGACAAGTGTTTGCAATGTCAACACTTTATATACATTTAAAGAACCGTGGCGGTATGCATGTATTGGAATTTAGCACCCATCCCTAATAAATGTATGCAATGTCATCCTTTCTTAGA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0046855 inositol phosphate dephosphorylation biological_process
GO:0046856 phosphatidylinositol dephosphorylation biological_process
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0031647 regulation of protein stability biological_process
GO:0008285 negative regulation of cell population proliferation biological_process
GO:0051895 negative regulation of focal adhesion assembly biological_process
GO:0051898 negative regulation of protein kinase B signaling biological_process
GO:0030336 negative regulation of cell migration biological_process
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function
GO:0030165 PDZ domain binding molecular_function
GO:0051800 phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity molecular_function
GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K01110 PTEN; phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611153.2 False 3019 mRNA 0.45 9 73433053 73450455
XM_021611148.2 True 3086 mRNA 0.45 10 73433055 73450455
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Neighbor

gene id symbol gene type direction distance location
LOC110528975 LOC106577008 coding upstream 14611 73400847 ~ 73418442 (+)
LOC110528965 LOC106577007 coding upstream 34058 73386028 ~ 73398995 (+)
LOC110528891 LOC106577001 coding upstream 349217 72816192 ~ 73083836 (+)
LOC110528917 NA coding upstream 432822 72999236 ~ 73000231 (+)
prokr1b LOC106577087 coding upstream 871994 72545613 ~ 72561059 (+)
LOC110529004 LOC106577010 coding downstream 27833 73478288 ~ 73485148 (+)
LOC110529026 LOC106577090 coding downstream 101163 73551618 ~ 73553748 (+)
LOC118936305 LOC106577091 coding downstream 120520 73570975 ~ 73573371 (+)
LOC110529036 itprip coding downstream 129716 73580171 ~ 73589533 (+)
cfap43 cfap43 coding downstream 149728 73600183 ~ 73637760 (+)
G81734 NA non-coding upstream 32709 73399572 ~ 73400344 (+)
G81779 NA non-coding upstream 47932 73384811 ~ 73385121 (+)
G81777 NA non-coding upstream 50786 73382041 ~ 73382267 (+)
G81775 NA non-coding upstream 52023 73380547 ~ 73381030 (+)
G81773 NA non-coding upstream 55987 73376857 ~ 73377066 (+)
G81802 NA non-coding downstream 3892 73454347 ~ 73454736 (+)
G81804 NA non-coding downstream 5471 73455926 ~ 73456380 (+)
G81805 NA non-coding downstream 6006 73456461 ~ 73456677 (+)
G81807 NA non-coding downstream 7720 73458175 ~ 73458488 (+)
G82064 NA non-coding downstream 49191 73499646 ~ 73499949 (+)
ccdc85a ccdc85a other upstream 2356951 71036440 ~ 71076239 (+)
G78121 NA other upstream 2778092 70571665 ~ 70654961 (+)
G75747 NA other upstream 5058124 68374505 ~ 68374929 (+)
G74139 NA other upstream 6648084 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 6674069 66756207 ~ 66758984 (+)
G82111 LOC106577091 other downstream 101161 73551616 ~ 73571737 (+)
G83836 NA other downstream 1458770 74909225 ~ 74909806 (+)
G83829 NA other downstream 1662205 75112660 ~ 75114190 (+)
G83979 NA other downstream 1694409 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 3007669 76457821 ~ 76459823 (+)

Expression

LOC110528986(LOC106577009) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
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LOC110528986(LOC106577009) Expression in each Bioproject

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LOC110528986(LOC106577009) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network